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Worm Phenotype (WP): vulva morphology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <5>
+ + + + 4:   morphology variant [WBPhenotype:0000520] <9>(444|532) (446|238|67)
+ + + 3:   organ system morphology variant [WBPhenotype:0000534] <8>(98|104) (100|47|16)
+ + 2:   reproductive system morphology variant [WBPhenotype:0000605] <5>(48|50) (51|17|6)
+ 1:   hermaphrodite reproductive system morphology variant [WBPhenotype:0001335] <3>(23|22) (25|7|2)
0:   vulva morphology variant [WBPhenotype:0000695] <5>(23|22) (25|7|2)
- 1:   vulval invagination variant L4 [WBPhenotype:0000510] <1>(2|0) (2|0|0)
- 1:   bivulva [WBPhenotype:0002011](0|0) (0|0|0)
- 1:   everted vulva [WBPhenotype:0000696](2|3) (2|1|0)
- 1:   protruding vulva [WBPhenotype:0000697](14|14) (14|5|2)
- 1:   protrusion at vulval region [WBPhenotype:0001096](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Nop domain0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
"Winged helix" DNA-binding domain0.00000008823Direct
RNA-binding domain, RBD0.0000002878Direct
WD40 repeat-like0.0000003383Direct
GroEL-intermediate domain like0.000001216Direct
GroEL equatorial domain-like0.000001216Direct
HMG-box0.000002828Direct
GroEL apical domain-like0.000003716Direct
Prefoldin0.00001242Direct
ARM repeat0.00006317Direct
GINS helical bundle-like0.0000904Direct
S-adenosylmethionine synthetase0.0000904Direct
Activating enzymes of the ubiquitin-like proteins0.0002905Direct
Ribosomal proteins S24e, L23 and L15e0.0003994Direct
Subtilisin-like0.0003994Direct
Nucleic acid-binding proteins0.0009091Direct
TAZ domain0.001072Inherited
Smc hinge domain0.001072Inherited
beta-beta-alpha zinc fingers0.001574Inherited
Nucleotide-diphospho-sugar transferases0.3717Inherited
Histone-fold1Inherited
NAD(P)-binding Rossmann-fold domains1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Nop domain0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.000000808Direct
Canonical RBD0.000001973Direct
Group II chaperonin (CCT, TRIC), apical domain0.000003279Direct
Tandem AAA-ATPase domain0.000003392Direct
WD40-repeat0.000004803Direct
HMG-box0.00001022Direct
DNA replication initiator (cdc21/cdc54) N-terminal domain0.00007174Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.0001439Direct
Proprotein convertase P-domain0.0001439Direct
S-adenosylmethionine synthetase0.0001439Direct
MIF4G domain-like0.0001439Direct
Prefoldin0.0002249Direct
I set domains0.0002625Direct
Nucleosome core histones0.0004515Direct
Forkhead DNA-binding domain0.0005237Direct
Subtilases0.0006333Direct
Smc hinge domain0.0006333Direct
Ubiquitin activating enzymes (UBA)0.0006333Direct
Actin/HSP700.001586Inherited
Chromo domain0.04023Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0Direct
Nop domain0Direct
"Winged helix" DNA-binding domain0.00000007018Direct
RNA-binding domain, RBD0.0000002298Direct
WD40 repeat-like0.0000002702Direct
GroEL equatorial domain-like0.0000009763Direct
GroEL-intermediate domain like0.0000009763Direct
HMG-box0.000002278Direct
GroEL apical domain-like0.000002996Direct
Prefoldin0.00001004Direct
ARM repeat0.00005136Direct
GINS helical bundle-like0.00007365Direct
S-adenosylmethionine synthetase0.00007365Direct
Activating enzymes of the ubiquitin-like proteins0.000238Direct
Subtilisin-like0.0003278Direct
Ribosomal proteins S24e, L23 and L15e0.0003278Direct
Nucleic acid-binding proteins0.0007515Direct
Chromo domain-like0.0008471Direct
Growth factor receptor domain0.0008766Direct
Smc hinge domain0.0008867Direct
TAZ domain0.0008867Direct
beta-beta-alpha zinc fingers0.001309Inherited
Nucleotide-diphospho-sugar transferases0.3509Inherited
Histone-fold1Inherited
NAD(P)-binding Rossmann-fold domains1Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.0000009763Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000009763Direct
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.00007365Direct
    49265,48726
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.00007365Direct
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0.00007365Direct
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0.00009819Direct
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.001449Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000009763Direct
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.00007365Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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