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Worm Phenotype (WP): vulva development variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <4>
+ + + 3:   development variant [WBPhenotype:0000518] <7>(508|582) (508|247|69)
+ + 2:   organ system development variant [WBPhenotype:0000530] <10>(78|72) (81|31|12)
+ 1:   reproductive system development variant [WBPhenotype:0000624] <10>(47|39) (48|20|8)
0:   vulva development variant [WBPhenotype:0000699] <3>(17|13) (17|3|1)
- 1:   vulva cell fate specification variant [WBPhenotype:0000220] <2>(14|12) (14|3|1)
- 1:   vulval invagination variant L4 [WBPhenotype:0000510] <1>(2|0) (2|0|0)
- 1:   vulval development incomplete [WBPhenotype:0001262](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
E2F-DP heterodimerization region0.000002111Direct
Chromo domain-like0.00000257Direct
FYVE/PHD zinc finger0.00009128Direct
Sm-like ribonucleoproteins0.0001817Direct
Arginase/deacetylase0.0002093Direct
HIT/MYND zinc finger-like0.001352Inherited
SET domain0.007188Inherited
RNA-binding domain, RBD0.01533Inherited
EGF/Laminin0.01585Inherited
Bromodomain0.01872Inherited
Nucleotide-diphospho-sugar transferases0.1233Inherited
Homeodomain-like0.1565Inherited
Protein kinase-like (PK-like)0.2824Inherited
HMG-box0.3726Inherited
"Winged helix" DNA-binding domain0.3981Inherited
WD40 repeat-like0.6145Inherited
NAD(P)-binding Rossmann-fold domains0.7576Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Cell cycle transcription factor e2f-dp0.000003155Direct
Histone deacetylase, HDAC0.0001804Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.0009085Direct
TBP-associated factors, TAFs0.001072Inherited
Chromo domain0.001488Inherited
PHD domain0.005028Inherited
Histone lysine methyltransferases0.005832Inherited
Bromodomain0.01565Inherited
PDZ domain0.02514Inherited
Pumilio repeat0.1139Inherited
Protein kinases, catalytic subunit0.2412Inherited
WD40-repeat0.4047Inherited
Homeodomain0.5199Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
E2F-DP heterodimerization region0.000001722Direct
Chromo domain-like0.000002098Direct
FYVE/PHD zinc finger0.00007528Direct
Sm-like ribonucleoproteins0.0001502Direct
Arginase/deacetylase0.000173Direct
HIT/MYND zinc finger-like0.001134Inherited
SET domain0.006154Inherited
RNA-binding domain, RBD0.01326Inherited
EGF/Laminin0.01372Inherited
Bromodomain0.01626Inherited
Nucleotide-diphospho-sugar transferases0.1121Inherited
Homeodomain-like0.1433Inherited
Protein kinase-like (PK-like)0.2636Inherited
HMG-box0.3521Inherited
"Winged helix" DNA-binding domain0.3771Inherited
WD40 repeat-like0.5926Inherited
NAD(P)-binding Rossmann-fold domains0.7376Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
  • 0Direct
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0.00005222Direct
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.3866Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.3521Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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