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Worm Phenotype (WP): vulva development variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + 3:   development variant [WBPhenotype:0000518] <6>(508|585) (508|248|68)
+ + 2:   organ system development variant [WBPhenotype:0000530] <10>(79|72) (80|33|13)
+ 1:   reproductive system development variant [WBPhenotype:0000624] <10>(48|41) (49|22|9)
0:   vulva development variant [WBPhenotype:0000699] <3>(15|13) (15|3|1)
- 1:   vulva cell fate specification variant [WBPhenotype:0000220] <2>(12|12) (12|3|1)
- 1:   vulval invagination variant L4 [WBPhenotype:0000510] <1>(2|0) (2|0|0)
- 1:   vulval development incomplete [WBPhenotype:0001262](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
E2F-DP heterodimerization region0.00000256Direct
Chromo domain-like0.000003522Direct
FYVE/PHD zinc finger0.0001397Direct
Arginase/deacetylase0.0002504Direct
Sm-like ribonucleoproteins0.0002557Direct
HIT/MYND zinc finger-like0.00161Inherited
SET domain0.008797Inherited
RNA-binding domain, RBD0.01102Inherited
Bromodomain0.02359Inherited
Homeodomain-like0.0915Inherited
Nucleotide-diphospho-sugar transferases0.1396Inherited
Protein kinase-like (PK-like)0.2631Inherited
HMG-box0.4045Inherited
WD40 repeat-like0.6812Inherited
NAD(P)-binding Rossmann-fold domains0.7946Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Cell cycle transcription factor e2f-dp0.000003807Direct
Histone deacetylase, HDAC0.0002158Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.001206Inherited
TBP-associated factors, TAFs0.001272Inherited
Chromo domain0.001762Inherited
PHD domain0.006497Inherited
Histone lysine methyltransferases0.00716Inherited
Bromodomain0.01986Inherited
PDZ domain0.03046Inherited
Pumilio repeat0.1285Inherited
Protein kinases, catalytic subunit0.222Inherited
Homeodomain0.3658Inherited
WD40-repeat0.4621Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
E2F-DP heterodimerization region0.000002075Direct
Chromo domain-like0.000002859Direct
FYVE/PHD zinc finger0.0001146Direct
Arginase/deacetylase0.000206Direct
Sm-like ribonucleoproteins0.0002103Direct
HIT/MYND zinc finger-like0.001345Inherited
SET domain0.007546Inherited
RNA-binding domain, RBD0.009493Inherited
Bromodomain0.0206Inherited
Homeodomain-like0.08239Inherited
Nucleotide-diphospho-sugar transferases0.1272Inherited
Protein kinase-like (PK-like)0.2451Inherited
HMG-box0.3838Inherited
WD40 repeat-like0.6599Inherited
NAD(P)-binding Rossmann-fold domains0.7762Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
  • 0Direct
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0.0000625Direct
    48065,50729
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 0.04307Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.3838Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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