SUPERFAMILY 1.75 HMM library and genome assignments server

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Worm Phenotype (WP): multivulva

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + 8:   Variant [WBPhenotype:0000886] <5>
+ + + + + + + 7:   development variant [WBPhenotype:0000518] <4>(475|533) (475|233|67)
+ + + + + + 6:   cell development variant [WBPhenotype:0000529] <17>(84|81) (84|32|10)
+ + + + + + 6:   organ system development variant [WBPhenotype:0000530] <9>(62|58) (63|29|8)
+ + + + + 5:   cell fate specification variant [WBPhenotype:0000216] <6>(21|18) (22|4|1)
+ + + + + 5:   reproductive system development variant [WBPhenotype:0000624] <10>(35|30) (36|16|6)
+ + + + 4:   vulva development variant [WBPhenotype:0000699] <3>(13|8) (13|3|1)
+ + + + 4:   VPC competence variant [WBPhenotype:0002017] <1>(12|7) (12|2|1)
+ + + 3:   vulva cell fate specification variant [WBPhenotype:0000220] <1>(12|7) (12|2|1)
+ + 2:   vulval cell induction variant [WBPhenotype:0001272] <4>(11|7) (11|1|1)
+ 1:   vulval cell induction increased [WBPhenotype:0000218] <1>(9|6) (9|1|1)
0:   multivulva [WBPhenotype:0000700](9|6) (9|1|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Sm-like ribonucleoproteins0.0000000000002165Direct
FYVE/PHD zinc finger0.00000005359Direct
E2F-DP heterodimerization region0.0000002415Direct
Bromodomain0.00000679Direct
Chromo domain-like0.0000463Direct
SET domain0.00007668Direct
HIT/MYND zinc finger-like0.0001855Direct
"Winged helix" DNA-binding domain0.000459Direct
WD40 repeat-like0.0008285Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Sm motif of small nuclear ribonucleoproteins, SNRNP0.00000000007479Direct
Cell cycle transcription factor e2f-dp0.0000003766Direct
Histone lysine methyltransferases0.000002237Direct
PHD domain0.000006125Direct
Bromodomain0.00001242Direct
Pumilio repeat0.000102Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Sm-like ribonucleoproteins0.000000000000173Direct
FYVE/PHD zinc finger0.00000004343Direct
E2F-DP heterodimerization region0.0000001963Direct
Bromodomain0.00000556Direct
Chromo domain-like0.00003818Direct
SET domain0.00006339Direct
HIT/MYND zinc finger-like0.0001536Direct
"Winged helix" DNA-binding domain0.000383Direct
WD40 repeat-like0.0006943Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
  • 0Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0001536Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)