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Worm Phenotype (WP): intestinal development variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <5>
+ + + 3:   development variant [WBPhenotype:0000518] <4>(506|581) (506|253|70)
+ + 2:   organ system development variant [WBPhenotype:0000530] <9>(78|72) (81|32|12)
+ 1:   alimentary system development variant [WBPhenotype:0000617] <6>(12|9) (13|5|3)
0:   intestinal development variant [WBPhenotype:0000708] <4>(10|8) (11|5|3)
- 1:   intestinal cell development variant [WBPhenotype:0000705] <3>(4|3) (5|2|2)
- 1:   excess intestinal cells [WBPhenotype:0001636](2|3) (2|1|0)
- 1:   gut obstructed [WBPhenotype:0001630](0|0) (0|0|0)
- 1:   no Intestine [WBPhenotype:0001637](2|2) (2|1|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Sm-like ribonucleoproteins0.00000000000003366Direct
RNA-binding domain, RBD0.000000000002486Direct
CCCH zinc finger0.0000524Direct
WD40 repeat-like0.0002239Direct
ABC transporter transmembrane region0.0003733Direct
SNARE-like0.0004652Direct
Bromodomain0.0006159Direct
BAR/IMD domain-like0.004967Inherited
Protein kinase-like (PK-like)0.007774Inherited
FYVE/PHD zinc finger0.4625Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Sm motif of small nuclear ribonucleoproteins, SNRNP0.00000000000831Direct
Canonical RBD0.00000000001538Direct
Clathrin coat assembly domain0.00003375Direct
CCCH zinc finger0.0001206Direct
ABC transporter transmembrane region0.0004499Direct
WD40-repeat0.00101Inherited
Protein kinases, catalytic subunit0.03486Inherited
ABC transporter ATPase domain-like0.2488Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Sm-like ribonucleoproteins0.00000000000002625Direct
RNA-binding domain, RBD0.000000000001949Direct
CCCH zinc finger0.00004262Direct
WD40 repeat-like0.000183Direct
ABC transporter transmembrane region0.0003064Direct
SNARE-like0.0003828Direct
Bromodomain0.0005077Direct
BAR/IMD domain-like0.004199Inherited
Protein kinase-like (PK-like)0.006618Inherited
FYVE/PHD zinc finger0.4395Inherited
PH domain-like0.741Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0.00005049Direct
    52540,90123
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 0.00005607Direct
    90123,52540
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0003064Direct
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.0006599Direct
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.002676Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52540,90123,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00005607Direct
    90123,52540,90123
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 0.00005607Direct
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0005077Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)