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Worm Phenotype (WP): muscle cell attachment variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <5>
+ + + 3:   physiology variant [WBPhenotype:0000519] <6>(495|573) (496|248|69)
+ + 2:   cell physiology variant [WBPhenotype:0000536] <27>(145|145) (146|64|18)
+ 1:   muscle cell physiology variant [WBPhenotype:0000990] <3>(16|16) (17|9|3)
0:   muscle cell attachment variant [WBPhenotype:0000716](10|9) (11|8|2)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
SH2 domain0.00000000000001505Direct
Second domain of FERM0.0000001616Direct
GTPase activation domain, GAP0.0000063Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.0001251Direct
Cysteine-rich domain0.000175Direct
DBL homology domain (DH-domain)0.0002072Direct
Actin-like ATPase domain0.0003013Direct
(Phosphotyrosine protein) phosphatases II0.0003877Direct
Fibronectin type III0.0006047Direct
Growth factor receptor domain0.0008734Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
SH2 domain0.000000000000341Direct
LIM domain0.000000009303Direct
Second domain of FERM0.0000003177Direct
Third domain of FERM0.0000006609Direct
First domain of FERM0.000002497Direct
BCR-homology GTPase activation domain (BH-domain)0.00005401Direct
Actin/HSP700.00008399Direct
DBL homology domain (DH-domain)0.0003859Direct
I set domains0.0004789Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SH2 domain0.00000000000001176Direct
Second domain of FERM0.0000001293Direct
GTPase activation domain, GAP0.000005099Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.0001021Direct
Cysteine-rich domain0.000143Direct
DBL homology domain (DH-domain)0.0001694Direct
Actin-like ATPase domain0.0002471Direct
(Phosphotyrosine protein) phosphatases II0.0003187Direct
Fibronectin type III0.0004988Direct
Growth factor receptor domain0.0007225Direct
BAR/IMD domain-like0.0008351Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.00000000000206Direct
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.00000001906Direct
    55550,50044
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0.00000007436Direct
    54236,47031
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 0.000001074Direct
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.000002411Direct
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.000002411Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.0001233Direct
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.0004478Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.000000000005516Direct
    54236,47031,50729
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.0000006719Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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