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Worm Phenotype (WP): muscle cell attachment variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <5>
+ + + 3:   physiology variant [WBPhenotype:0000519] <6>(490|567) (491|248|69)
+ + 2:   cell physiology variant [WBPhenotype:0000536] <27>(143|144) (143|64|18)
+ 1:   muscle cell physiology variant [WBPhenotype:0000990] <3>(17|16) (17|9|3)
0:   muscle cell attachment variant [WBPhenotype:0000716](11|9) (11|8|2)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
SH2 domain0.00000000000001597Direct
Second domain of FERM0.0000001656Direct
GTPase activation domain, GAP0.000004219Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.0001277Direct
Cysteine-rich domain0.0001538Direct
DBL homology domain (DH-domain)0.0002103Direct
Actin-like ATPase domain0.0003067Direct
(Phosphotyrosine protein) phosphatases II0.0003975Direct
Fibronectin type III0.0006152Direct
Growth factor receptor domain0.0007634Direct
BAR/IMD domain-like0.0008856Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
SH2 domain0.0000000000004064Direct
LIM domain0.00000001001Direct
Second domain of FERM0.0000003417Direct
Third domain of FERM0.0000007023Direct
First domain of FERM0.000002622Direct
BCR-homology GTPase activation domain (BH-domain)0.00003503Direct
Actin/HSP700.00008898Direct
DBL homology domain (DH-domain)0.0004042Direct
I set domains0.0005012Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SH2 domain0.00000000000001245Direct
Second domain of FERM0.0000001322Direct
GTPase activation domain, GAP0.000003406Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.0001042Direct
Cysteine-rich domain0.0001255Direct
DBL homology domain (DH-domain)0.0001718Direct
Actin-like ATPase domain0.0002513Direct
(Phosphotyrosine protein) phosphatases II0.0003265Direct
Fibronectin type III0.0005071Direct
Growth factor receptor domain0.0006305Direct
BAR/IMD domain-like0.0007323Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.00000000000213Direct
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.00000001949Direct
    55550,50044
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0.00000007549Direct
    54236,47031
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 0.000001094Direct
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.000002447Direct
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.000002447Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.0001255Direct
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.0004549Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.000000000005664Direct
    54236,47031,50729
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.0000006848Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)