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Worm Phenotype (WP): cell division variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <5>
+ + 2:   physiology variant [WBPhenotype:0000519] <7>(494|573) (495|248|68)
+ 1:   blast cell physiology variant [WBPhenotype:0000985] <26>(152|155) (154|66|17)
+ 1:   cell physiology variant [WBPhenotype:0000536] <26>(152|155) (154|66|17)
0:   cell division variant [WBPhenotype:0000746] <20>(55|56) (55|24|4)
- 1:   meiosis defective early emb [WBPhenotype:0001041] <11>(37|33) (37|16|4)
- 1:   meiosis variant [WBPhenotype:0000775] <11>(37|33) (37|16|4)
- 1:   spindle variant [WBPhenotype:0002414] <8>(7|11) (7|5|0)
- 1:   cytokinesis variant [WBPhenotype:0002408] <6>(11|12) (11|2|0)
- 1:   mitosis variant [WBPhenotype:0001743] <6>(10|12) (10|4|1)
- 1:   cell cleavage variant [WBPhenotype:0000266] <2>(2|1) (2|1|0)
- 1:   cell division polarity variant [WBPhenotype:0001235] <2>(2|2) (2|0|0)
- 1:   VPC cell division variant [WBPhenotype:0000345] <1>(0|0) (0|0|0)
- 1:   anaphase variant [WBPhenotype:0002389] <1>(0|0) (0|0|0)
- 1:   cell division failure [WBPhenotype:0000417] <1>(0|0) (0|0|0)
- 1:   cell division precocious [WBPhenotype:0001495] <1>(0|0) (0|0|0)
- 1:   division axis defective [WBPhenotype:0001133] <1>(3|2) (3|2|0)
- 1:   cell division incomplete [WBPhenotype:0000371](0|0) (0|0|0)
- 1:   cell division slow [WBPhenotype:0000363](0|0) (0|0|0)
- 1:   cell division variant male [WBPhenotype:0001299](0|0) (0|0|0)
- 1:   metaphase variant [WBPhenotype:0002388](0|0) (0|0|0)
- 1:   multiple nuclei early emb [WBPhenotype:0001143](1|3) (1|1|0)
- 1:   pace of P lineage defective early emb [WBPhenotype:0000046](0|1) (0|0|0)
- 1:   sister cell division timing asynchrony reduced [WBPhenotype:0002369](2|1) (2|0|0)
- 1:   variable cell division timing [WBPhenotype:0002390](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Ribosomal protein L10Direct
The spindle assembly checkpoint protein mad20Direct
Histone-fold0Direct
LEM domain0Direct
Profilin (actin-binding protein)0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
P-loop containing nucleoside triphosphate hydrolases0.00003154Direct
Frizzled cysteine-rich domain0.00003535Direct
Skp1 dimerisation domain-like0.00004729Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0001022Direct
ADC-like0.0003226Direct
Cdc48 domain 2-like0.0003226Direct
post-AAA+ oligomerization domain-like0.0003226Direct
Nucleic acid-binding proteins0.0009007Direct
S15/NS1 RNA-binding domain0.001373Inherited
GroEL-intermediate domain like0.002051Inherited
GroEL equatorial domain-like0.002051Inherited
Class II aaRS and biotin synthetases0.00232Inherited
CCCH zinc finger0.002584Inherited
"Winged helix" DNA-binding domain0.003232Inherited
FKBP-like0.004528Inherited
Activating enzymes of the ubiquitin-like proteins0.004757Inherited
Sm-like ribonucleoproteins0.004954Inherited
GroEL apical domain-like0.0104Inherited
Smc hinge domain0.01093Inherited
L30e-like0.01093Inherited
ARM repeat0.01279Inherited
Actin-like ATPase domain0.01759Inherited
POZ domain0.02573Inherited
F1F0 ATP synthase subunit C0.05613Inherited
Translational machinery components0.05613Inherited
Ribosomal proteins S24e, L23 and L15e0.05613Inherited
DNA repair protein MutS, domain III0.05613Inherited
p53-like transcription factors0.05636Inherited
Ribosomal protein S5 domain 2-like0.07833Inherited
TPR-like0.09847Inherited
Translation proteins SH3-like domain0.1118Inherited
Tubulin nucleotide-binding domain-like0.1118Inherited
Quinoprotein alcohol dehydrogenase-like0.1857Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.1857Inherited
Tubulin C-terminal domain-like0.1867Inherited
EF-hand0.2342Inherited
Cyclin-like0.2538Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.2998Inherited
Prefoldin0.2998Inherited
Nucleotidylyl transferase0.4684Inherited
Calponin-homology domain, CH-domain0.5301Inherited
BAR/IMD domain-like0.599Inherited
SNARE-like0.641Inherited
Translation proteins0.6499Inherited
Protein kinase-like (PK-like)0.6521Inherited
PDZ domain-like0.6563Inherited
GTPase activation domain, GAP0.6908Inherited
Homeodomain-like0.7469Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Profilin (actin-binding protein)0Direct
Ribosomal protein L10Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
Proteasome subunits0Direct
Nucleosome core histones0Direct
DNA gyrase/MutL, second domain0Direct
LEM domain0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.0000001352Direct
Extended AAA-ATPase domain0.0000009111Direct
RecA protein-like (ATPase-domain)0.000008505Direct
Skp1 dimerisation domain-like0.00004235Direct
Frizzled cysteine-rich domain0.00006647Direct
BTB/POZ domain0.00007451Direct
DNA polymerase III clamp loader subunits, C-terminal domain0.0005093Direct
Cdc48 N-terminal domain-like0.0005093Direct
Cdc48 domain 2-like0.0005093Direct
Anticodon-binding domain0.0005093Direct
Anticodon-binding domain of Class II aaRS0.0005093Direct
DNA gyrase/MutL, N-terminal domain0.0005093Direct
Group II chaperonin (CCT, TRIC), apical domain0.001745Inherited
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.002017Inherited
DEP domain0.002155Inherited
Actin/HSP700.003618Inherited
Sm motif of small nuclear ribonucleoproteins, SNRNP0.004084Inherited
Armadillo repeat0.004326Inherited
CCCH zinc finger0.007213Inherited
FKBP immunophilin/proline isomerase0.008041Inherited
Motor proteins0.00945Inherited
DNA replication initiator (cdc21/cdc54) N-terminal domain0.009464Inherited
Smc hinge domain0.02183Inherited
L30e/L7ae ribosomal proteins0.02183Inherited
G proteins0.03652Inherited
Translational machinery components0.03897Inherited
F1F0 ATP synthase subunit C0.04995Inherited
DNA repair protein MutS, domain III0.04995Inherited
Pumilio repeat0.09407Inherited
Tubulin, GTPase domain0.1036Inherited
Cold shock DNA-binding domain-like0.112Inherited
Prefoldin0.1512Inherited
ABC transporter ATPase domain-like0.1555Inherited
Tubulin, C-terminal domain0.176Inherited
Cyclin0.2626Inherited
Elongation factors0.2717Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.2795Inherited
Nitrogenase iron protein-like0.2841Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.2841Inherited
Clathrin adaptor core protein0.4264Inherited
Protein kinases, catalytic subunit0.4371Inherited
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.4853Inherited
Tetratricopeptide repeat (TPR)0.4907Inherited
BCR-homology GTPase activation domain (BH-domain)0.5202Inherited
Calponin-homology domain, CH-domain0.5204Inherited
PDZ domain0.5536Inherited
Homeodomain0.6914Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Ribosomal protein L10Direct
Profilin (actin-binding protein)0Direct
LEM domain0Direct
Histone-fold0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
The spindle assembly checkpoint protein mad20Direct
P-loop containing nucleoside triphosphate hydrolases0.00002559Direct
Frizzled cysteine-rich domain0.0000287Direct
Skp1 dimerisation domain-like0.00003844Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.00008331Direct
Cdc48 domain 2-like0.0002644Direct
ADC-like0.0002644Direct
post-AAA+ oligomerization domain-like0.0002644Direct
Nucleic acid-binding proteins0.0007444Direct
S15/NS1 RNA-binding domain0.00114Inherited
GroEL equatorial domain-like0.001709Inherited
GroEL-intermediate domain like0.001709Inherited
Class II aaRS and biotin synthetases0.00194Inherited
CCCH zinc finger0.002163Inherited
"Winged helix" DNA-binding domain0.002716Inherited
FKBP-like0.00382Inherited
Activating enzymes of the ubiquitin-like proteins0.004015Inherited
Sm-like ribonucleoproteins0.004184Inherited
GroEL apical domain-like0.008884Inherited
Smc hinge domain0.009347Inherited
L30e-like0.009347Inherited
ARM repeat0.01097Inherited
Actin-like ATPase domain0.01516Inherited
POZ domain0.02239Inherited
DNA repair protein MutS, domain III0.04972Inherited
Translational machinery components0.04972Inherited
Ribosomal proteins S24e, L23 and L15e0.04972Inherited
F1F0 ATP synthase subunit C0.04972Inherited
p53-like transcription factors0.04993Inherited
Ribosomal protein S5 domain 2-like0.06999Inherited
TPR-like0.08865Inherited
Tubulin nucleotide-binding domain-like0.101Inherited
Translation proteins SH3-like domain0.101Inherited
Quinoprotein alcohol dehydrogenase-like0.1702Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.1702Inherited
Tubulin C-terminal domain-like0.1711Inherited
EF-hand0.2166Inherited
Cyclin-like0.2354Inherited
Prefoldin0.2803Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.2803Inherited
Nucleotidylyl transferase0.4465Inherited
Calponin-homology domain, CH-domain0.5075Inherited
BAR/IMD domain-like0.5767Inherited
SNARE-like0.6189Inherited
Translation proteins0.6279Inherited
Protein kinase-like (PK-like)0.6301Inherited
PDZ domain-like0.6344Inherited
GTPase activation domain, GAP0.6696Inherited
Homeodomain-like0.7274Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50692,54585
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 0Direct
    55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    54585,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0.00008331Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.0002644Direct
    55681,52954
  • 55681 - Class II aaRS and biotin synthetases
  • 52954 - Class II aaRS ABD-related
  • 0.0002644Direct
    52540,48019
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 48019 - post-AAA+ oligomerization domain-like
  • 0.0002644Direct
    50249,55681
  • 50249 - Nucleic acid-binding proteins
  • 55681 - Class II aaRS and biotin synthetases
  • 0.00114Inherited
    54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 0.00114Inherited
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.001709Inherited
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.001709Inherited
    90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0.001931Inherited
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.007631Inherited
    52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0.02166Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.03679Inherited
    48334,52540
  • 48334 - DNA repair protein MutS, domain III
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.04972Inherited
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.06345Inherited
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.101Inherited
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.101Inherited
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.2658Inherited
    50447,50465
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.2803Inherited
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.2822Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.9964Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50692,54585,52540
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54585,52540,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.001709Inherited
    52540,50447,50465
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.2803Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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