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Worm Phenotype (WP): cell division variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <2>
+ + 2:   physiology variant [WBPhenotype:0000519] <15>(509|582) (509|247|68)
+ 1:   cell physiology variant [WBPhenotype:0000536] <35>(156|154) (158|67|19)
0:   cell division variant [WBPhenotype:0000746] <20>(51|53) (51|20|4)
- 1:   meiosis defective early emb [WBPhenotype:0001041] <10>(34|31) (34|14|4)
- 1:   meiosis variant [WBPhenotype:0000775] <10>(34|31) (34|14|4)
- 1:   mitosis variant [WBPhenotype:0001743] <8>(10|12) (10|4|1)
- 1:   spindle variant [WBPhenotype:0002414] <8>(7|11) (7|5|0)
- 1:   cytokinesis variant [WBPhenotype:0002408] <5>(11|12) (11|2|0)
- 1:   cell cleavage variant [WBPhenotype:0000266] <2>(1|1) (1|1|0)
- 1:   cell division polarity variant [WBPhenotype:0001235] <2>(3|3) (3|0|0)
- 1:   VPC cell division variant [WBPhenotype:0000345] <1>(0|0) (0|0|0)
- 1:   anaphase variant [WBPhenotype:0002389] <1>(0|0) (0|0|0)
- 1:   cell division failure [WBPhenotype:0000417] <1>(0|0) (0|0|0)
- 1:   cell division precocious [WBPhenotype:0001495] <1>(0|0) (0|0|0)
- 1:   division axis defective [WBPhenotype:0001133] <1>(3|2) (3|2|0)
- 1:   cell division incomplete [WBPhenotype:0000371](0|0) (0|0|0)
- 1:   cell division slow [WBPhenotype:0000363](0|0) (0|0|0)
- 1:   cell division variant male [WBPhenotype:0001299](0|0) (0|0|0)
- 1:   metaphase variant [WBPhenotype:0002388](0|0) (0|0|0)
- 1:   multiple nuclei early emb [WBPhenotype:0001143](1|3) (1|1|0)
- 1:   pace of P lineage defective early emb [WBPhenotype:0000046](0|1) (0|0|0)
- 1:   sister cell division timing asynchrony reduced [WBPhenotype:0002369](2|1) (2|0|0)
- 1:   variable cell division timing [WBPhenotype:0002390](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Profilin (actin-binding protein)0Direct
LEM domain0Direct
The spindle assembly checkpoint protein mad20Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Smc hinge domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Histone-fold0Direct
Activating enzymes of the ubiquitin-like proteins0.000001918Direct
P-loop containing nucleoside triphosphate hydrolases0.000003846Direct
Skp1 dimerisation domain-like0.000008989Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.00002159Direct
Frizzled cysteine-rich domain0.00002669Direct
Nucleic acid-binding proteins0.0002128Direct
ADC-like0.0002575Direct
post-AAA+ oligomerization domain-like0.0002575Direct
Cdc48 domain 2-like0.0002575Direct
GroEL equatorial domain-like0.0009018Direct
GroEL-intermediate domain like0.0009018Direct
S15/NS1 RNA-binding domain0.001109Inherited
CCCH zinc finger0.001779Inherited
Sm-like ribonucleoproteins0.002104Inherited
"Winged helix" DNA-binding domain0.003086Inherited
ARM repeat0.00406Inherited
GroEL apical domain-like0.004926Inherited
POZ domain0.006491Inherited
Actin-like ATPase domain0.03411Inherited
Class II aaRS and biotin synthetases0.03483Inherited
Ribosomal proteins S24e, L23 and L15e0.03789Inherited
p53-like transcription factors0.066Inherited
Tubulin nucleotide-binding domain-like0.066Inherited
Translation proteins SH3-like domain0.066Inherited
Cyclin-like0.1036Inherited
Tubulin C-terminal domain-like0.1161Inherited
F1F0 ATP synthase subunit C0.1166Inherited
Translational machinery components0.1166Inherited
L30e-like0.1222Inherited
Ribosomal protein S5 domain 2-like0.1408Inherited
TPR-like0.1923Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.2108Inherited
Prefoldin0.2253Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.2253Inherited
BAR/IMD domain-like0.255Inherited
Calponin-homology domain, CH-domain0.3813Inherited
Nucleotidylyl transferase0.4648Inherited
Translation proteins0.5016Inherited
SNARE-like0.5152Inherited
GTPase activation domain, GAP0.5542Inherited
Homeodomain-like0.7564Inherited
PDZ domain-like0.7851Inherited
PX domain0.8343Inherited
Protein kinase-like (PK-like)0.8792Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Proteasome subunits0Direct
Nucleosome core histones0Direct
Profilin (actin-binding protein)0Direct
LEM domain0Direct
Smc hinge domain0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.00000008045Direct
Extended AAA-ATPase domain0.00000009305Direct
RecA protein-like (ATPase-domain)0.000005737Direct
Skp1 dimerisation domain-like0.000008379Direct
BTB/POZ domain0.00001029Direct
Frizzled cysteine-rich domain0.00004768Direct
Ubiquitin activating enzymes (UBA)0.00004768Direct
Cdc48 N-terminal domain-like0.0003893Direct
DNA polymerase III clamp loader subunits, C-terminal domain0.0003893Direct
Cdc48 domain 2-like0.0003893Direct
Anticodon-binding domain0.0003893Direct
Anticodon-binding domain of Class II aaRS0.0003893Direct
Group II chaperonin (CCT, TRIC), apical domain0.0007741Direct
DEP domain0.001668Inherited
Armadillo repeat0.001841Inherited
Sm motif of small nuclear ribonucleoproteins, SNRNP0.002006Inherited
Motor proteins0.002986Inherited
CCCH zinc finger0.004709Inherited
DNA replication initiator (cdc21/cdc54) N-terminal domain0.00517Inherited
Actin/HSP700.01051Inherited
G proteins0.01295Inherited
Translational machinery components0.02262Inherited
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.03188Inherited
Pumilio repeat0.05786Inherited
Cold shock DNA-binding domain-like0.06056Inherited
Tubulin, GTPase domain0.06103Inherited
L30e/L7ae ribosomal proteins0.1067Inherited
Prefoldin0.1067Inherited
F1F0 ATP synthase subunit C0.1067Inherited
Cyclin0.1085Inherited
Tubulin, C-terminal domain0.1085Inherited
ABC transporter ATPase domain-like0.1561Inherited
Elongation factors0.1844Inherited
Nitrogenase iron protein-like0.2113Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.2113Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.3311Inherited
Clathrin adaptor core protein0.3311Inherited
Calponin-homology domain, CH-domain0.3729Inherited
BCR-homology GTPase activation domain (BH-domain)0.4019Inherited
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.5045Inherited
Tetratricopeptide repeat (TPR)0.5972Inherited
PDZ domain0.6268Inherited
Homeodomain0.7213Inherited
Protein kinases, catalytic subunit0.7468Inherited
PX domain0.8251Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Histone-fold0Direct
Smc hinge domain0Direct
Profilin (actin-binding protein)0Direct
The spindle assembly checkpoint protein mad20Direct
LEM domain0Direct
Activating enzymes of the ubiquitin-like proteins0.00000156Direct
P-loop containing nucleoside triphosphate hydrolases0.000003133Direct
Skp1 dimerisation domain-like0.00000733Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.00001766Direct
Frizzled cysteine-rich domain0.00002184Direct
Nucleic acid-binding proteins0.0001755Direct
Cdc48 domain 2-like0.0002126Direct
ADC-like0.0002126Direct
post-AAA+ oligomerization domain-like0.0002126Direct
GroEL equatorial domain-like0.0007518Direct
GroEL-intermediate domain like0.0007518Direct
S15/NS1 RNA-binding domain0.0009261Direct
CCCH zinc finger0.001492Inherited
Sm-like ribonucleoproteins0.00177Inherited
"Winged helix" DNA-binding domain0.002609Inherited
ARM repeat0.003442Inherited
GroEL apical domain-like0.004188Inherited
POZ domain0.005544Inherited
Actin-like ATPase domain0.03004Inherited
Class II aaRS and biotin synthetases0.03068Inherited
Ribosomal proteins S24e, L23 and L15e0.03345Inherited
Translation proteins SH3-like domain0.05895Inherited
p53-like transcription factors0.05895Inherited
Tubulin nucleotide-binding domain-like0.05895Inherited
Cyclin-like0.09368Inherited
Tubulin C-terminal domain-like0.1053Inherited
F1F0 ATP synthase subunit C0.1058Inherited
Translational machinery components0.1058Inherited
L30e-like0.1109Inherited
Ribosomal protein S5 domain 2-like0.1283Inherited
TPR-like0.177Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.1946Inherited
Prefoldin0.2085Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.2085Inherited
BAR/IMD domain-like0.2372Inherited
Calponin-homology domain, CH-domain0.3608Inherited
Nucleotidylyl transferase0.4437Inherited
Translation proteins0.4802Inherited
SNARE-like0.4936Inherited
GTPase activation domain, GAP0.5326Inherited
Homeodomain-like0.737Inherited
PDZ domain-like0.7661Inherited
PX domain0.8167Inherited
Protein kinase-like (PK-like)0.8634Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50692,54585
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    54585,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0.00001766Direct
    52540,48019
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 48019 - post-AAA+ oligomerization domain-like
  • 0.0002126Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.0007518Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0007518Direct
    50249,55681
  • 50249 - Nucleic acid-binding proteins
  • 55681 - Class II aaRS and biotin synthetases
  • 0.0009261Direct
    90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0.001414Inherited
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.01779Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.03242Inherited
    52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0.03345Inherited
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.03345Inherited
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.05776Inherited
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.05895Inherited
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.05895Inherited
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.1799Inherited
    50447,50465
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.2085Inherited
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.3618Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.9505Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50692,54585,52540
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54585,52540,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0007518Direct
    52540,50447,50465
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.2085Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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