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Worm Phenotype (WP): neuron morphology variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <5>
+ + + 3:   morphology variant [WBPhenotype:0000520] <9>(444|532) (446|238|67)
+ + 2:   cell morphology variant [WBPhenotype:0000533] <9>(106|107) (110|55|17)
+ + 2:   organ system morphology variant [WBPhenotype:0000534] <8>(98|104) (100|47|16)
+ 1:   cell type morphology variant [WBPhenotype:0002108] <12>(78|81) (82|45|15)
+ 1:   nervous system morphology variant [WBPhenotype:0000604] <8>(29|26) (30|10|3)
0:   neuron morphology variant [WBPhenotype:0000905] <5>(13|9) (14|5|2)
- 1:   ciliated neuron morphology variant [WBPhenotype:0001526] <3>(1|1) (1|1|0)
- 1:   neurite morphology variant [WBPhenotype:0001398] <1>(12|8) (12|4|2)
- 1:   motor neuron morphology variant [WBPhenotype:0001331](0|0) (0|0|0)
- 1:   multipolar neuron [WBPhenotype:0001679](0|0) (0|0|0)
- 1:   touch receptor cell morphology variant [WBPhenotype:0001676](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Fibronectin type III0.00003712Direct
GTPase activation domain, GAP0.00003712Direct
Immunoglobulin0.0002688Direct
Concanavalin A-like lectins/glucanases0.001561Inherited
Tubulin nucleotide-binding domain-like0.01845Inherited
Tubulin C-terminal domain-like0.02709Inherited
Cysteine-rich domain0.03806Inherited
EGF/Laminin0.04851Inherited
SMAD/FHA domain0.09894Inherited
PH domain-like0.1241Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.2109Inherited
P-loop containing nucleoside triphosphate hydrolases0.2748Inherited
TPR-like0.4394Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
BCR-homology GTPase activation domain (BH-domain)0.000000183Direct
Fibronectin type III0.00004208Direct
Laminin G-like module0.0002297Direct
FHA domain0.001403Inherited
Motor proteins0.00347Inherited
I set domains0.003601Inherited
Tubulin, GTPase domain0.01831Inherited
Pleckstrin-homology domain (PH domain)0.06342Inherited
WD40-repeat0.7387Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
GTPase activation domain, GAP0.00003014Direct
Fibronectin type III0.00003014Direct
Immunoglobulin0.0002201Direct
PYP-like sensor domain (PAS domain)0.0009985Direct
Concanavalin A-like lectins/glucanases0.001297Inherited
Tubulin nucleotide-binding domain-like0.01592Inherited
Tubulin C-terminal domain-like0.02362Inherited
Cysteine-rich domain0.03339Inherited
EGF/Laminin0.04281Inherited
SMAD/FHA domain0.08909Inherited
PH domain-like0.1125Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.1942Inherited
P-loop containing nucleoside triphosphate hydrolases0.2558Inherited
TPR-like0.4173Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.0003582Direct
    49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.001245Inherited
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.01252Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.01286Inherited
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.01592Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.002892Inherited
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.008084Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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