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Worm Phenotype (WP): developmental morphology variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   Variant [WBPhenotype:0000886] <5>
+ 1:   morphology variant [WBPhenotype:0000520] <9>(444|532) (446|238|67)
0:   developmental morphology variant [WBPhenotype:0000934] <16>(58|58) (58|21|8)
- 1:   dauer body morphology variant [WBPhenotype:0001545] <8>(0|0) (0|0|0)
- 1:   tail morphology variant [WBPhenotype:0000073] <8>(13|12) (13|3|0)
- 1:   body size variant [WBPhenotype:0000231] <6>(35|37) (35|11|6)
- 1:   head morphology variant [WBPhenotype:0000071] <6>(2|1) (2|0|0)
- 1:   egg morphology variant [WBPhenotype:0000037] <4>(3|3) (3|3|0)
- 1:   body axis morphology variant [WBPhenotype:0000581] <2>(3|3) (3|1|0)
- 1:   sexually dimorphic morphology variant [WBPhenotype:0001023] <2>(13|13) (13|4|1)
- 1:   body constriction [WBPhenotype:0000212] <1>(0|0) (0|0|0)
- 1:   body vacuole [WBPhenotype:0001395] <1>(3|3) (3|0|0)
- 1:   larval body morphology variant [WBPhenotype:0000035] <1>(1|1) (1|0|0)
- 1:   body protrusions [WBPhenotype:0000453](0|0) (0|0|0)
- 1:   body twisted [WBPhenotype:0001295](0|0) (0|0|0)
- 1:   lumpy [WBPhenotype:0000406](0|0) (0|0|0)
- 1:   maternal effect morphology variant [WBPhenotype:0002458](0|0) (0|0|0)
- 1:   organism morphology variable [WBPhenotype:0000409](1|1) (1|0|0)
- 1:   pseudocoelom morphology variant [WBPhenotype:0000949](2|0) (2|1|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
Transducin (alpha subunit), insertion domain0Direct
Homeodomain-like0.0000000001394Direct
DBL homology domain (DH-domain)0.00000001239Direct
Hedgehog/intein (Hint) domain0.0000001249Direct
Insulin-like0.0000002627Direct
ARM repeat0.000004561Direct
Sema domain0.000008339Direct
PH domain-like0.00001234Direct
Lamin A/C globular tail domain0.00001311Direct
SNF-like0.00001316Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00003083Direct
P-loop containing nucleoside triphosphate hydrolases0.00003105Direct
Growth factor receptor domain0.00003819Direct
Spectrin repeat0.0001886Direct
Intermediate filament protein, coiled coil region0.0001886Direct
EGF/Laminin0.0002276Direct
Nicotinic receptor ligand binding domain-like0.000296Direct
Plexin repeat0.000345Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.000345Direct
SMAD MH1 domain0.000345Direct
Nucleotide-binding domain0.000345Direct
LuxS/MPP-like metallohydrolase0.0003937Direct
Arginase/deacetylase0.000446Direct
Transducin (heterotrimeric G protein), gamma chain0.0005385Direct
S-adenosylmethionine synthetase0.0005385Direct
Fibronectin type III0.0006663Direct
Zn-binding ribosomal proteins0.0009192Direct
Immunoglobulin0.0009946Direct
SNARE-like0.001296Inherited
lambda repressor-like DNA-binding domains0.001844Inherited
Tim10-like0.002248Inherited
Frizzled cysteine-rich domain0.002248Inherited
Subtilisin-like0.002248Inherited
beta-beta-alpha zinc fingers0.002253Inherited
Troponin coil-coiled subunits0.002361Inherited
Multidrug resistance efflux transporter EmrE0.003286Inherited
Heme-dependent peroxidases0.005183Inherited
cAMP-binding domain-like0.007916Inherited
Cytochrome b5-like heme/steroid binding domain0.01262Inherited
PYP-like sensor domain (PAS domain)0.01971Inherited
Cysteine-rich domain0.0241Inherited
TPR-like0.02526Inherited
RNA-binding domain, RBD0.03212Inherited
Ankyrin repeat0.0342Inherited
FYVE/PHD zinc finger0.03524Inherited
Translation proteins0.04299Inherited
Protease propeptides/inhibitors0.06176Inherited
Cysteine-rich DNA binding domain, (DM domain)0.06176Inherited
Voltage-gated potassium channels0.07974Inherited
SMAD/FHA domain0.08351Inherited
Histone-fold0.1162Inherited
Protein kinase-like (PK-like)0.2488Inherited
POZ domain0.4035Inherited
Thioredoxin-like0.8838Inherited
GST C-terminal domain-like1Inherited
C-type lectin-like1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
D-aminoacid oxidase, N-terminal domain0Direct
Skp1 dimerisation domain-like0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
Sema domain0Direct
MIF4G domain-like0Direct
Transducin (alpha subunit), insertion domain0.000000000000006447Direct
Homeodomain0.0000000003372Direct
DBL homology domain (DH-domain)0.0000001212Direct
G proteins0.0000003076Direct
Hedgehog C-terminal (Hog) autoprocessing domain0.000000588Direct
Pleckstrin-homology domain (PH domain)0.000001123Direct
Insulin-like0.000002792Direct
SNF-like0.00001369Direct
Laminin-type module0.00002157Direct
I set domains0.00003164Direct
Clathrin coat assembly domain0.0001267Direct
D-aminoacid oxidase-like0.0001437Direct
Histone deacetylase, HDAC0.0004263Direct
Intermediate filament protein, coiled coil region0.0005431Direct
SMAD MH1 domain0.0007148Direct
Plexin repeat0.0007148Direct
PDI-like0.0007148Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.0007148Direct
BTB/POZ domain0.0007252Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0008203Direct
Troponin I0.0009322Direct
Glycosyl transferases group 10.0009322Direct
Transducin (heterotrimeric G protein), gamma chain0.0009322Direct
Proprotein convertase P-domain0.0009322Direct
S-adenosylmethionine synthetase0.0009322Direct
Growth factor receptor domain0.0009745Direct
Nicotinic receptor ligand binding domain-like0.001055Inherited
Lamin A/C globular tail domain0.001077Inherited
MPP-like0.001103Inherited
Clathrin adaptor core protein0.002101Inherited
Spectrin repeat0.002294Inherited
Subtilases0.003873Inherited
Frizzled cysteine-rich domain0.003873Inherited
Tim10/DDP0.003873Inherited
Transforming growth factor (TGF)-beta0.003873Inherited
SMAD domain0.004747Inherited
Forkhead DNA-binding domain0.007551Inherited
CUT domain0.009749Inherited
cAMP-binding domain0.01164Inherited
Myeloperoxidase-like0.01164Inherited
Classic zinc finger, C2H20.01189Inherited
Canonical RBD0.08666Inherited
Cysteine-rich DNA binding domain, (DM domain)0.09913Inherited
Pumilio repeat0.09913Inherited
Synaptotagmin-like (S variant)0.1095Inherited
Ankyrin repeat0.138Inherited
Tetratricopeptide repeat (TPR)0.1551Inherited
Voltage-gated potassium channels0.2341Inherited
Rhodopsin-like0.2499Inherited
Nucleosome core histones0.3306Inherited
Protein kinases, catalytic subunit0.6109Inherited
C-type lectin domain1Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
Transducin (alpha subunit), insertion domain0Direct
Homeodomain-like0.0000000001095Direct
DBL homology domain (DH-domain)0.000000009807Direct
Hedgehog/intein (Hint) domain0.00000009944Direct
Insulin-like0.0000002097Direct
ARM repeat0.000003678Direct
Sema domain0.000006734Direct
PH domain-like0.000009978Direct
Lamin A/C globular tail domain0.00001061Direct
SNF-like0.00001065Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00002502Direct
P-loop containing nucleoside triphosphate hydrolases0.0000252Direct
Growth factor receptor domain0.00003101Direct
Spectrin repeat0.000154Direct
Intermediate filament protein, coiled coil region0.000154Direct
EGF/Laminin0.0001861Direct
Nicotinic receptor ligand binding domain-like0.0002426Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.0002828Direct
Plexin repeat0.0002828Direct
SMAD MH1 domain0.0002828Direct
Nucleotide-binding domain0.0002828Direct
LuxS/MPP-like metallohydrolase0.0003229Direct
Arginase/deacetylase0.0003663Direct
Transducin (heterotrimeric G protein), gamma chain0.0004429Direct
S-adenosylmethionine synthetase0.0004429Direct
Fibronectin type III0.0005493Direct
Zn-binding ribosomal proteins0.00076Direct
Immunoglobulin0.0008225Direct
SNARE-like0.001074Inherited
lambda repressor-like DNA-binding domains0.001535Inherited
Subtilisin-like0.001878Inherited
Frizzled cysteine-rich domain0.001878Inherited
Tim10-like0.001878Inherited
beta-beta-alpha zinc fingers0.001883Inherited
Troponin coil-coiled subunits0.001974Inherited
Multidrug resistance efflux transporter EmrE0.002763Inherited
Heme-dependent peroxidases0.004379Inherited
cAMP-binding domain-like0.00673Inherited
Cytochrome b5-like heme/steroid binding domain0.01082Inherited
PYP-like sensor domain (PAS domain)0.01705Inherited
Cysteine-rich domain0.02095Inherited
TPR-like0.02197Inherited
RNA-binding domain, RBD0.0281Inherited
Ankyrin repeat0.02995Inherited
FYVE/PHD zinc finger0.03088Inherited
Translation proteins0.03779Inherited
Cysteine-rich DNA binding domain, (DM domain)0.05483Inherited
Protease propeptides/inhibitors0.05483Inherited
Voltage-gated potassium channels0.0713Inherited
SMAD/FHA domain0.07477Inherited
Histone-fold0.1051Inherited
Protein kinase-like (PK-like)0.2307Inherited
POZ domain0.3822Inherited
Thioredoxin-like0.8688Inherited
C-type lectin-like1Inherited
GST C-terminal domain-like1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    51971,54373
  • 51971 - Nucleotide-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0Direct
    54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0Direct
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0Direct
    48065,50729
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 0.000000009428Direct
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0000002219Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.00002502Direct
    63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0.0003229Direct
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.0004301Direct
    64356,49447
  • 64356 - SNARE-like
  • 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
  • 0.0004429Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.0004429Direct
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.0004429Direct
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0.0004429Direct
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.0007134Direct
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.0007988Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.000853Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.001074Inherited
    52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.004379Inherited
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.005324Inherited
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.01891Inherited
    52833,47616
  • 52833 - Thioredoxin-like
  • 47616 - GST C-terminal domain-like
  • 1Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0001206Direct
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0002452Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0002828Direct
    48452,48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.0004429Direct
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.0004429Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.0007988Direct
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.001535Inherited
    57667,57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.1321Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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