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Worm Phenotype (WP): muscle cell physiology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <2>
+ + 2:   organ system physiology variant [WBPhenotype:0000575] <8>(445|526) (445|228|63)
+ + 2:   physiology variant [WBPhenotype:0000519] <15>(509|582) (509|247|68)
+ 1:   cell physiology variant [WBPhenotype:0000536] <35>(156|154) (158|67|19)
+ 1:   muscle system physiology variant [WBPhenotype:0000611] <3>(28|29) (29|14|5)
0:   muscle cell physiology variant [WBPhenotype:0000990] <8>(21|22) (23|14|5)
- 1:   striated muscle development variant [WBPhenotype:0000921] <2>(2|2) (2|1|1)
- 1:   body wall muscle physiology variant [WBPhenotype:0001292] <1>(2|2) (2|1|1)
- 1:   muscle cell activity variant [WBPhenotype:0001735] <1>(1|1) (1|0|0)
- 1:   pharyngeal muscle physiology variant [WBPhenotype:0001191] <1>(0|0) (0|0|0)
- 1:   somatic sheath physiology variant [WBPhenotype:0001198] <1>(4|3) (4|3|1)
- 1:   vulval muscle physiology variant [WBPhenotype:0001075] <1>(0|0) (0|0|0)
- 1:   muscle cell attachment variant [WBPhenotype:0000716](7|9) (8|8|2)
- 1:   muscle membrane potential variant [WBPhenotype:0002166](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
PH domain-like0.000000000003618Direct
SH2 domain0.000000000006189Direct
SH3-domain0.0000000001823Direct
PLC-like phosphodiesterases0.000000006532Direct
Growth factor receptor domain0.000001257Direct
Second domain of FERM0.000003848Direct
EF-hand0.00001567Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.00004378Direct
Myosin rod fragments0.00009725Direct
EGF/Laminin0.0001032Direct
Tropomyosin0.0001322Direct
Protein kinase-like (PK-like)0.0002704Direct
Ubiquitin-like0.0002956Direct
Spectrin repeat0.0003186Direct
Calponin-homology domain, CH-domain0.0003774Direct
GTPase activation domain, GAP0.0008698Direct
Voltage-gated potassium channels0.004877Inherited
(Phosphotyrosine protein) phosphatases II0.004928Inherited
Cysteine-rich domain0.006501Inherited
DBL homology domain (DH-domain)0.01079Inherited
Actin-like ATPase domain0.03642Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Mammalian PLC0Direct
SH2 domain0.0000000001293Direct
SH3-domain0.0000000004108Direct
EF-hand modules in multidomain proteins0.00000002619Direct
Pleckstrin-homology domain (PH domain)0.0000002083Direct
LIM domain0.0000007032Direct
PLC-like (P variant)0.000001735Direct
Second domain of FERM0.000004441Direct
Third domain of FERM0.000005545Direct
First domain of FERM0.00001381Direct
Laminin-type module0.00004509Direct
Myosin rod fragments0.0001042Direct
Spectrin repeat0.0001429Direct
Growth factor receptor domain0.0001429Direct
Tropomyosin0.0001429Direct
Protein kinases, catalytic subunit0.0003874Direct
Calponin-homology domain, CH-domain0.0004574Direct
BCR-homology GTPase activation domain (BH-domain)0.001283Inherited
DBL homology domain (DH-domain)0.0113Inherited
I set domains0.0113Inherited
Actin/HSP700.02721Inherited
Voltage-gated potassium channels0.02901Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
PH domain-like0.000000000002865Direct
SH2 domain0.000000000004903Direct
SH3-domain0.0000000001449Direct
PLC-like phosphodiesterases0.000000005224Direct
Growth factor receptor domain0.000001019Direct
Second domain of FERM0.000003135Direct
EF-hand0.00001281Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.00003586Direct
Myosin rod fragments0.0000799Direct
EGF/Laminin0.00008477Direct
Tropomyosin0.0001087Direct
Protein kinase-like (PK-like)0.0002234Direct
Ubiquitin-like0.0002444Direct
Spectrin repeat0.0002634Direct
Calponin-homology domain, CH-domain0.0003125Direct
GTPase activation domain, GAP0.0007249Direct
cAMP-binding domain-like0.0009635Direct
Voltage-gated potassium channels0.004146Inherited
(Phosphotyrosine protein) phosphatases II0.00419Inherited
Cysteine-rich domain0.005553Inherited
DBL homology domain (DH-domain)0.009302Inherited
BAR/IMD domain-like0.02457Inherited
Actin-like ATPase domain0.03212Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50729,47473
  • 50729 - PH domain-like
  • 47473 - EF-hand
  • 0Direct
    47473,51695
  • 47473 - EF-hand
  • 51695 - PLC-like phosphodiesterases
  • 0Direct
    51695,49562
  • 51695 - PLC-like phosphodiesterases
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0Direct
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.00000003749Direct
    55550,50044
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0.0000004292Direct
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.0000004933Direct
    54236,47031
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 0.000008985Direct
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.00005491Direct
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.0000799Direct
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.0000799Direct
    64593,74853
  • 64593 - Intermediate filament protein, coiled coil region
  • 74853 - Lamin A/C globular tail domain
  • 0.0003555Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0009635Direct
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.002719Inherited
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.02644Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50729,47473,51695
  • 50729 - PH domain-like
  • 47473 - EF-hand
  • 51695 - PLC-like phosphodiesterases
  • 0Direct
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.00000003782Direct
    54236,47031,50729
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.000006328Direct
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0001087Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0009635Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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