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Worm Phenotype (WP): muscle cell physiology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <5>
+ + 2:   physiology variant [WBPhenotype:0000519] <6>(490|567) (491|248|69)
+ 1:   cell physiology variant [WBPhenotype:0000536] <27>(143|144) (143|64|18)
0:   muscle cell physiology variant [WBPhenotype:0000990] <3>(17|16) (17|9|3)
- 1:   muscle cell activity variant [WBPhenotype:0001735] <1>(1|1) (1|0|0)
- 1:   muscle cell attachment variant [WBPhenotype:0000716](11|9) (11|8|2)
- 1:   muscle membrane potential variant [WBPhenotype:0002166](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
SH2 domain0.00000000000007075Direct
SH3-domain0.000000000002427Direct
PH domain-like0.00000000006223Direct
Second domain of FERM0.0000009484Direct
Calponin-homology domain, CH-domain0.00008644Direct
Spectrin repeat0.0001047Direct
GTPase activation domain, GAP0.0001503Direct
Protein kinase-like (PK-like)0.0002717Direct
(Phosphotyrosine protein) phosphatases II0.0007771Direct
Voltage-gated potassium channels0.0007931Direct
Cysteine-rich domain0.001094Inherited
Growth factor receptor domain0.003107Inherited
Fibronectin type III0.00452Inherited
DBL homology domain (DH-domain)0.004799Inherited
BAR/IMD domain-like0.009732Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.009999Inherited
Actin-like ATPase domain0.0122Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
SH2 domain0.000000000001514Direct
SH3-domain0.000000000004574Direct
LIM domain0.0000001566Direct
Second domain of FERM0.000001014Direct
Third domain of FERM0.000001103Direct
First domain of FERM0.000003769Direct
Spectrin repeat0.00004301Direct
Calponin-homology domain, CH-domain0.00009678Direct
Pleckstrin-homology domain (PH domain)0.0001589Direct
BCR-homology GTPase activation domain (BH-domain)0.0002219Direct
Phosphotyrosine-binding domain (PTB)0.0004119Direct
Protein kinases, catalytic subunit0.0004231Direct
I set domains0.004777Inherited
DBL homology domain (DH-domain)0.004777Inherited
Voltage-gated potassium channels0.006744Inherited
Actin/HSP700.00807Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SH2 domain0.00000000000005521Direct
SH3-domain0.000000000001902Direct
PH domain-like0.00000000004895Direct
Second domain of FERM0.0000007621Direct
Calponin-homology domain, CH-domain0.00007041Direct
Spectrin repeat0.00008538Direct
GTPase activation domain, GAP0.0001227Direct
Protein kinase-like (PK-like)0.0002224Direct
(Phosphotyrosine protein) phosphatases II0.000642Direct
Voltage-gated potassium channels0.0006553Direct
Cysteine-rich domain0.0009061Direct
Growth factor receptor domain0.002611Inherited
Fibronectin type III0.00382Inherited
DBL homology domain (DH-domain)0.004057Inherited
BAR/IMD domain-like0.008312Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.008545Inherited
Actin-like ATPase domain0.01046Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.000000001201Direct
    55550,50044
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0.0000001142Direct
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.0000001174Direct
    54236,47031
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 0.000001931Direct
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.00003112Direct
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.00003112Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0003901Direct
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.0007217Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.008356Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.000000007027Direct
    54236,47031,50729
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.000001931Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0003901Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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