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Worm Phenotype (WP): ectopic expression transgene

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + 8:   Variant [WBPhenotype:0000886] <5>
+ + + + + + + 7:   physiology variant [WBPhenotype:0000519] <7>(494|573) (495|248|68)
+ + + + + + 6:   organism physiology variant [WBPhenotype:0000576] <10>(354|423) (357|200|60)
+ + + + + 5:   organism homeostasis metabolism variant [WBPhenotype:0000577] <17>(343|412) (348|198|59)
+ + + + 4:   organism metabolism processing variant [WBPhenotype:0000027] <25>(167|178) (172|81|24)
+ + + 3:   gene expression variant [WBPhenotype:0000717] <10>(121|132) (128|62|19)
+ + 2:   transgene expression variant [WBPhenotype:0000306] <3>(83|93) (89|41|13)
+ 1:   pattern of transgene expression variant [WBPhenotype:0000961] <2>(47|56) (51|26|11)
0:   ectopic expression transgene [WBPhenotype:0001276](6|5) (6|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
CCCH zinc finger0.0000000202Direct
Homeodomain-like0.00000007414Direct
FYVE/PHD zinc finger0.0000004171Direct
Chromo domain-like0.000006586Direct
HLH, helix-loop-helix DNA-binding domain0.00008544Direct
p53-like transcription factors0.0006435Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
CCCH zinc finger0.00000002775Direct
PHD domain0.00002136Direct
HLH, helix-loop-helix DNA-binding domain0.0001008Direct
N-acetyl transferase, NAT0.0001783Direct
Homeodomain0.0003959Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
CCCH zinc finger0.00000001602Direct
Homeodomain-like0.00000005893Direct
FYVE/PHD zinc finger0.0000003335Direct
Chromo domain-like0.000005315Direct
HLH, helix-loop-helix DNA-binding domain0.00006957Direct
p53-like transcription factors0.0005302Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0.0000000008653Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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