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Worm Phenotype (WP): mitochondria morphology variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <5>
+ + + 3:   morphology variant [WBPhenotype:0000520] <9>(444|532) (446|238|67)
+ + 2:   cell morphology variant [WBPhenotype:0000533] <9>(106|107) (110|55|17)
+ 1:   cell component morphology variant [WBPhenotype:0002089] <20>(84|88) (84|43|9)
0:   mitochondria morphology variant [WBPhenotype:0001401] <3>(18|18) (18|11|2)
- 1:   mitochondria spacing variant [WBPhenotype:0001576] <1>(14|14) (14|8|2)
- 1:   connected mitochondria [WBPhenotype:0001402](0|0) (0|0|0)
- 1:   mitochondria vesiculated [WBPhenotype:0001805](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
SH2 domain0.00000002769Direct
Calpain large subunit, middle domain (domain III)0.0000000768Direct
SH3-domain0.000000188Direct
PH domain-like0.000001063Direct
Integrin domains0.000002978Direct
Second domain of FERM0.00002389Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.00002946Direct
Voltage-gated potassium channels0.00005207Direct
Immunoglobulin0.0006483Direct
Spectrin repeat0.0007461Direct
DBL homology domain (DH-domain)0.0008279Direct
Protein kinase-like (PK-like)0.003114Inherited
Calponin-homology domain, CH-domain0.004569Inherited
Fibronectin type III0.004771Inherited
Cysteine-rich domain0.01203Inherited
(Phosphotyrosine protein) phosphatases II0.054Inherited
Actin-like ATPase domain0.1249Inherited
GTPase activation domain, GAP0.1934Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Integrin domains0Direct
LIM domain0.00000003327Direct
SH2 domain0.00000004418Direct
Calpain large subunit, middle domain (domain III)0.0000002089Direct
SH3-domain0.0000002477Direct
Pleckstrin-homology domain (PH domain)0.000005825Direct
Calpain large subunit, catalytic domain (domain II)0.00001709Direct
Third domain of FERM0.0000412Direct
Second domain of FERM0.00004183Direct
First domain of FERM0.00007053Direct
Voltage-gated potassium channels0.0005454Direct
Spectrin repeat0.0006899Direct
DBL homology domain (DH-domain)0.0007891Direct
I set domains0.002493Inherited
Protein kinases, catalytic subunit0.004377Inherited
Calponin-homology domain, CH-domain0.004658Inherited
Actin/HSP700.07184Inherited
BCR-homology GTPase activation domain (BH-domain)0.2392Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SH2 domain0.00000002198Direct
Calpain large subunit, middle domain (domain III)0.00000006105Direct
SH3-domain0.00000015Direct
PH domain-like0.0000008533Direct
Integrin domains0.000002399Direct
Second domain of FERM0.00001937Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.0000239Direct
Voltage-gated potassium channels0.00004233Direct
Immunoglobulin0.0005343Direct
Spectrin repeat0.0006156Direct
DBL homology domain (DH-domain)0.0006838Direct
Protein kinase-like (PK-like)0.002614Inherited
Calponin-homology domain, CH-domain0.003855Inherited
Fibronectin type III0.004028Inherited
Cysteine-rich domain0.01031Inherited
(Phosphotyrosine protein) phosphatases II0.04777Inherited
Actin-like ATPase domain0.1132Inherited
GTPase activation domain, GAP0.1774Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54001,49758
  • 54001 - Cysteine proteinases
  • 49758 - Calpain large subunit, middle domain (domain III)
  • 0.00000001582Direct
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.0000001894Direct
    55550,50044
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0.000002399Direct
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.000003109Direct
    54236,47031
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 0.00007021Direct
    48065,50729
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 0.0006156Direct
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0007919Direct
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.002981Inherited
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.002981Inherited
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.01693Inherited
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.1132Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.00000000001913Direct
    54236,47031,50729
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.00004485Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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