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Worm Phenotype (WP): mitochondria spacing variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <5>
+ + + 3:   morphology variant [WBPhenotype:0000520] <9>(444|532) (446|238|67)
+ + 2:   cell component morphology variant [WBPhenotype:0002089] <20>(84|88) (84|43|9)
+ + 2:   cell morphology variant [WBPhenotype:0000533] <9>(106|107) (110|55|17)
+ 1:   mitochondria morphology variant [WBPhenotype:0001401] <3>(18|18) (18|11|2)
+ 1:   cell component localization variant [WBPhenotype:0002098] <8>(23|24) (23|12|3)
0:   mitochondria spacing variant [WBPhenotype:0001576] <1>(14|14) (14|8|2)
- 1:   mitochondria alignment variant [WBPhenotype:0001577](14|14) (14|8|2)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
SH2 domain0.00000000000008847Direct
Second domain of FERM0.0000003377Direct
SH3-domain0.0000007029Direct
GTPase activation domain, GAP0.0000128Direct
PH domain-like0.00006938Direct
(Phosphotyrosine protein) phosphatases II0.0008601Direct
Protein kinase-like (PK-like)0.001492Inherited
Actin-like ATPase domain0.009925Inherited
Spectrin repeat0.0196Inherited
Cysteine-rich domain0.02585Inherited
Calponin-homology domain, CH-domain0.02677Inherited
DBL homology domain (DH-domain)0.1342Inherited
Fibronectin type III0.1807Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.2104Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
SH2 domain0.000000000002135Direct
Second domain of FERM0.0000006807Direct
SH3-domain0.000000728Direct
Third domain of FERM0.00000126Direct
First domain of FERM0.000004208Direct
BCR-homology GTPase activation domain (BH-domain)0.0001Direct
LIM domain0.001932Inherited
Protein kinases, catalytic subunit0.003029Inherited
Actin/HSP700.009125Inherited
Spectrin repeat0.01764Inherited
Calponin-homology domain, CH-domain0.02514Inherited
DBL homology domain (DH-domain)0.1274Inherited
Pleckstrin-homology domain (PH domain)0.171Inherited
I set domains0.2135Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SH2 domain0.00000000000006885Direct
Second domain of FERM0.0000002697Direct
SH3-domain0.0000005633Direct
GTPase activation domain, GAP0.00001035Direct
PH domain-like0.00005641Direct
(Phosphotyrosine protein) phosphatases II0.0007108Direct
Protein kinase-like (PK-like)0.00124Inherited
Actin-like ATPase domain0.008469Inherited
Spectrin repeat0.01694Inherited
Cysteine-rich domain0.0225Inherited
Calponin-homology domain, CH-domain0.02333Inherited
DBL homology domain (DH-domain)0.1219Inherited
Fibronectin type III0.1655Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.1937Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.00000004012Direct
    55550,50044
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0.000000124Direct
    54236,47031
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 0.000001989Direct
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.000003984Direct
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.000003984Direct
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.0000576Direct
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.0007799Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.008469Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    54236,47031,50729
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.000001248Direct
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.000575Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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