SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Worm Phenotype (WP): cadmium response variant

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <2>
+ + + + + 5:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + + 4:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|56)
+ + + 3:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(361|421) (363|190|55)
+ + 2:   organism environmental stimulus response variant [WBPhenotype:0000738] <15>(138|128) (139|57|18)
+ 1:   metal response variant [WBPhenotype:0000591] <15>(12|13) (12|9|5)
0:   cadmium response variant [WBPhenotype:0001653] <2>(8|9) (8|8|5)
- 1:   cadmium hypersensitive [WBPhenotype:0001655](6|6) (6|5|1)
- 1:   cadmium resistant [WBPhenotype:0001654](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
ABC transporter transmembrane region0.00000000000005087Direct
Cation efflux protein cytoplasmic domain-like0.0000009627Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.000007528Direct
Cytochrome P4500.00001062Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.00001228Direct
HSP20-like chaperones0.00002005Direct
GST C-terminal domain-like0.06951Inherited
Cation efflux protein transmembrane domain-like0.2534Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
ABC transporter transmembrane region0.00000000000006357Direct
ABC transporter ATPase domain-like0.0000000005328Direct
Cation efflux protein transmembrane domain-like0.0000003311Direct
Cation efflux protein cytoplasmic domain-like0.0000004899Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.000006355Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.00001823Direct
Cytochrome P4500.00002835Direct
Actin/HSP700.0007069Direct
Glutathione S-transferase (GST), C-terminal domain0.09517Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
ABC transporter transmembrane region0.00000000000003992Direct
Cation efflux protein cytoplasmic domain-like0.0000007777Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.000006124Direct
Cytochrome P4500.000008637Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.000009995Direct
HSP20-like chaperones0.00001635Direct
GST C-terminal domain-like0.06209Inherited
Cation efflux protein transmembrane domain-like0.2355Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
90123,52540
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00000000000003992Direct
    52540,90123
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 0.00000007686Direct
    161111,160240
  • 161111 - Cation efflux protein transmembrane domain-like
  • 160240 - Cation efflux protein cytoplasmic domain-like
  • 0.0000007777Direct
    100920,100934
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.000003479Direct
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.000006124Direct
    56436,56436
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0.0001523Direct
    56436,49854
  • 56436 - C-type lectin-like
  • 49854 - Spermadhesin, CUB domain
  • 0.0007198Direct
    52833,47616
  • 52833 - Thioredoxin-like
  • 47616 - GST C-terminal domain-like
  • 0.06209Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    90123,52540,90123
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 0.00000007686Direct
    52540,90123,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00000007686Direct
    53067,100920,100934
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.000003479Direct
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.000006124Direct
    56436,56436,49854
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 49854 - Spermadhesin, CUB domain
  • 0.000282Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)