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Worm Phenotype (WP): body length variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <2>
+ + + + + 5:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|63)
+ + + + 4:   organism morphology variant [WBPhenotype:0000535] <7>(321|428) (322|184|49)
+ + + 3:   body region morphology variant [WBPhenotype:0000532] <6>(46|48) (47|17|7)
+ + + 3:   organism segment morphology variant [WBPhenotype:0000582] <3>(44|48) (45|15|7)
+ + 2:   body morphology variant [WBPhenotype:0000072] <9>(35|42) (36|11|7)
+ 1:   body size variant [WBPhenotype:0000231] <6>(32|38) (33|9|7)
0:   body length variant [WBPhenotype:0001726] <3>(23|30) (24|6|4)
- 1:   small [WBPhenotype:0000229] <2>(13|14) (13|2|0)
- 1:   dumpy [WBPhenotype:0000583](9|9) (10|3|3)
- 1:   long [WBPhenotype:0000022](1|1) (1|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0Direct
Insulin-like0.0000000009415Direct
Hedgehog/intein (Hint) domain0.000000002073Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.00003778Direct
Nucleotide-binding domain0.00003778Direct
Transducin (heterotrimeric G protein), gamma chain0.00008973Direct
Tim10-like0.0003975Direct
Subtilisin-like0.0003975Direct
Troponin coil-coiled subunits0.004059Inherited
PYP-like sensor domain (PAS domain)0.004059Inherited
Heme-dependent peroxidases0.004187Inherited
Voltage-gated potassium channels0.004852Inherited
SNARE-like0.00595Inherited
cAMP-binding domain-like0.00595Inherited
Thiamin diphosphate-binding fold (THDP-binding)0.00662Inherited
Protease propeptides/inhibitors0.01439Inherited
DBL homology domain (DH-domain)0.4174Inherited
SMAD/FHA domain0.4937Inherited
SMAD MH1 domain0.5814Inherited
Transducin (alpha subunit), insertion domain0.8581Inherited
Nicotinic receptor ligand binding domain-like0.9849Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.9849Inherited
SNF-like1Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0Direct
D-aminoacid oxidase, N-terminal domain0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Hedgehog C-terminal (Hog) autoprocessing domain0.000000009519Direct
Insulin-like0.00000001036Direct
Laminin-type module0.000001355Direct
D-aminoacid oxidase-like0.0000144Direct
PDI-like0.00007689Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.00007689Direct
Glycosyl transferases group 10.000151Direct
Proprotein convertase P-domain0.000151Direct
Transducin (heterotrimeric G protein), gamma chain0.000151Direct
MIF4G domain-like0.000151Direct
Spectrin repeat0.0001849Direct
Clathrin adaptor core protein0.0002404Direct
Clathrin coat assembly domain0.0002404Direct
Transforming growth factor (TGF)-beta0.0006648Direct
Tim10/DDP0.0006648Direct
Subtilases0.0006648Direct
Myeloperoxidase-like0.007939Inherited
cAMP-binding domain0.007939Inherited
Synaptotagmin-like (S variant)0.02024Inherited
Voltage-gated potassium channels0.02343Inherited
DBL homology domain (DH-domain)0.3849Inherited
SMAD domain0.5476Inherited
SMAD MH1 domain0.5476Inherited
Transducin (alpha subunit), insertion domain0.8283Inherited
Nicotinic receptor ligand binding domain-like0.9669Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.9863Inherited
SNF-like1Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0Direct
Insulin-like0.0000000007476Direct
Hedgehog/intein (Hint) domain0.000000001648Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.00003087Direct
Nucleotide-binding domain0.00003087Direct
Transducin (heterotrimeric G protein), gamma chain0.0000735Direct
Tim10-like0.000328Direct
Subtilisin-like0.000328Direct
PYP-like sensor domain (PAS domain)0.003438Inherited
Troponin coil-coiled subunits0.003438Inherited
Heme-dependent peroxidases0.003549Inherited
Voltage-gated potassium channels0.00412Inherited
SNARE-like0.005065Inherited
cAMP-binding domain-like0.005065Inherited
Thiamin diphosphate-binding fold (THDP-binding)0.005646Inherited
Protease propeptides/inhibitors0.01246Inherited
EGF/Laminin0.07521Inherited
DBL homology domain (DH-domain)0.3966Inherited
SMAD/FHA domain0.472Inherited
SMAD MH1 domain0.5595Inherited
Transducin (alpha subunit), insertion domain0.8417Inherited
Nicotinic receptor ligand binding domain-like0.9738Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.9738Inherited
SNF-like1Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
51971,54373
  • 51971 - Nucleotide-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0Direct
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0.0000735Direct
    64356,49447
  • 64356 - SNARE-like
  • 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
  • 0.0000735Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.00009821Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.8417Inherited
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.9738Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.00003087Direct
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0001067Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.008638Inherited
    57424,57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.01246Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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