SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Worm Phenotype (WP): body width variant

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <5>
+ + + 3:   morphology variant [WBPhenotype:0000520] <9>(444|532) (446|238|67)
+ + 2:   adult body morphology variant [WBPhenotype:0000036] <16>(58|58) (58|21|8)
+ + 2:   developmental morphology variant [WBPhenotype:0000934] <16>(58|58) (58|21|8)
+ + 2:   organism morphology variant [WBPhenotype:0000535] <16>(323|433) (324|192|53)
+ + 2:   organism segment morphology variant [WBPhenotype:0000582] <16>(58|58) (58|21|8)
+ + 2:   body region morphology variant [WBPhenotype:0000532] <16>(58|58) (58|21|8)
+ + 2:   body morphology variant [WBPhenotype:0000072] <16>(58|58) (58|22|8)
+ 1:   body size variant [WBPhenotype:0000231] <6>(35|37) (35|11|6)
0:   body width variant [WBPhenotype:0001727] <3>(29|34) (29|8|6)
- 1:   small [WBPhenotype:0000229] <4>(15|17) (15|4|2)
- 1:   dumpy [WBPhenotype:0000583](9|9) (9|3|2)
- 1:   fat [WBPhenotype:0000542](5|7) (5|2|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0Direct
Insulin-like0.000000002788Direct
Hedgehog/intein (Hint) domain0.000000004366Direct
SNF-like0.0000004074Direct
Lamin A/C globular tail domain0.0000007418Direct
Spectrin repeat0.00001634Direct
Intermediate filament protein, coiled coil region0.00001634Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.00005715Direct
SMAD MH1 domain0.00005715Direct
Transducin (heterotrimeric G protein), gamma chain0.0001258Direct
S-adenosylmethionine synthetase0.0001258Direct
Zn-binding ribosomal proteins0.0001796Direct
Tim10-like0.0005499Direct
Subtilisin-like0.0005499Direct
Cytochrome b5-like heme/steroid binding domain0.002604Inherited
PYP-like sensor domain (PAS domain)0.005473Inherited
Troponin coil-coiled subunits0.005473Inherited
Heme-dependent peroxidases0.005964Inherited
Translation proteins0.006622Inherited
cAMP-binding domain-like0.008442Inherited
SNARE-like0.008442Inherited
Voltage-gated potassium channels0.01007Inherited
SMAD/FHA domain0.01778Inherited
Protease propeptides/inhibitors0.01905Inherited
Histone-fold0.3322Inherited
Ankyrin repeat0.3322Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.4272Inherited
Nicotinic receptor ligand binding domain-like0.4272Inherited
Transducin (alpha subunit), insertion domain0.5474Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
Hedgehog C-terminal (Hog) autoprocessing domain0.00000002075Direct
Insulin-like0.00000003174Direct
SNF-like0.0000004091Direct
Laminin-type module0.000002299Direct
Intermediate filament protein, coiled coil region0.00004878Direct
SMAD MH1 domain0.0001189Direct
PDI-like0.0001189Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.0001189Direct
Lamin A/C globular tail domain0.0001359Direct
Transducin (heterotrimeric G protein), gamma chain0.0002162Direct
Proprotein convertase P-domain0.0002162Direct
S-adenosylmethionine synthetase0.0002162Direct
MIF4G domain-like0.0002162Direct
Spectrin repeat0.0003029Direct
Clathrin coat assembly domain0.0003674Direct
Clathrin adaptor core protein0.0003674Direct
SMAD domain0.0008685Direct
Subtilases0.0009378Direct
Tim10/DDP0.0009378Direct
Transforming growth factor (TGF)-beta0.0009378Direct
cAMP-binding domain0.01151Inherited
Myeloperoxidase-like0.01151Inherited
Synaptotagmin-like (S variant)0.02863Inherited
Voltage-gated potassium channels0.04446Inherited
Nucleosome core histones0.04708Inherited
G proteins0.1212Inherited
Ankyrin repeat0.2863Inherited
Nicotinic receptor ligand binding domain-like0.3724Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.3983Inherited
Rhodopsin-like0.4405Inherited
Transducin (alpha subunit), insertion domain0.4886Inherited
Pleckstrin-homology domain (PH domain)0.7093Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0Direct
Insulin-like0.000000002203Direct
Hedgehog/intein (Hint) domain0.000000003452Direct
SNF-like0.0000003256Direct
Lamin A/C globular tail domain0.0000005945Direct
Spectrin repeat0.00001323Direct
Intermediate filament protein, coiled coil region0.00001323Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.00004646Direct
SMAD MH1 domain0.00004646Direct
Transducin (heterotrimeric G protein), gamma chain0.0001026Direct
S-adenosylmethionine synthetase0.0001026Direct
Zn-binding ribosomal proteins0.0001466Direct
Subtilisin-like0.0004523Direct
Tim10-like0.0004523Direct
Cytochrome b5-like heme/steroid binding domain0.00218Inherited
PYP-like sensor domain (PAS domain)0.004626Inherited
Troponin coil-coiled subunits0.004626Inherited
Heme-dependent peroxidases0.005047Inherited
Translation proteins0.005611Inherited
cAMP-binding domain-like0.007185Inherited
SNARE-like0.007185Inherited
Voltage-gated potassium channels0.008593Inherited
SMAD/FHA domain0.01533Inherited
Protease propeptides/inhibitors0.01645Inherited
Histone-fold0.3121Inherited
Ankyrin repeat0.3121Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.4053Inherited
Nicotinic receptor ligand binding domain-like0.4053Inherited
Transducin (alpha subunit), insertion domain0.5249Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
64356,49447
  • 64356 - SNARE-like
  • 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
  • 0.0001026Direct
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.0001026Direct
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0.0001026Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0001466Direct
    52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.0006263Direct
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.003153Inherited
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.4053Inherited
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.5249Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.00004646Direct
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.0001026Direct
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0001801Direct
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0001948Direct
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.0002031Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.01146Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)