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Worm Phenotype (WP): coiling frequency

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <4>
+ + + + 4:   behavior variant [WBPhenotype:0000517] <2>(133|132) (135|53|20)
+ + + 3:   organism behavior variant [WBPhenotype:0000525] <21>(133|132) (135|53|20)
+ + 2:   body posture variant [WBPhenotype:0000001] <7>(15|18) (15|5|2)
+ 1:   coiling variant [WBPhenotype:0002297] <2>(8|10) (8|2|0)
0:   coiling frequency [WBPhenotype:0002298] <2>(8|9) (8|2|0)
- 1:   coiling frequency decreased [WBPhenotype:0002299](1|1) (1|0|0)
- 1:   coiling frequency increased [WBPhenotype:0002300](0|0) (0|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
SNF-like0.00000000000001328Direct
SMAD MH1 domain0.000002353Direct
Voltage-gated potassium channels0.000002807Direct
Insulin-like0.000004733Direct
SMAD/FHA domain0.00005854Direct
cAMP-binding domain-like0.0001283Direct
Homeodomain-like0.0004159Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
SNF-like0.00000000000004843Direct
Rhodopsin-like0.00000000219Direct
SMAD MH1 domain0.000004789Direct
Insulin-like0.00001515Direct
SMAD domain0.00002106Direct
Voltage-gated potassium channels0.0000593Direct
cAMP-binding domain0.0001881Direct
Homeodomain0.000464Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
SNF-like0.00000000000001049Direct
SMAD MH1 domain0.00000192Direct
Voltage-gated potassium channels0.000002292Direct
Insulin-like0.000003869Direct
SMAD/FHA domain0.00004822Direct
cAMP-binding domain-like0.000106Direct
Homeodomain-like0.0003453Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0.0000149Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)