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Worm Phenotype (WP): turning frequency variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + + 9:   Variant [WBPhenotype:0000886] <2>
+ + + + + + + + 8:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + + + + + 7:   behavior variant [WBPhenotype:0000517] <2>(119|121) (119|54|20)
+ + + + + + 6:   organism behavior variant [WBPhenotype:0000525] <20>(119|121) (119|54|20)
+ + + + + 5:   movement variant [WBPhenotype:0001206] <4>(48|56) (48|25|14)
+ + + + 4:   locomotion variant [WBPhenotype:0000643] <4>(46|52) (46|23|12)
+ + + 3:   locomotor coordination variant [WBPhenotype:0004017] <7>(18|21) (18|7|1)
+ + 2:   directionality variant [WBPhenotype:0001702] <2>(15|16) (15|6|1)
+ 1:   turning variant [WBPhenotype:0002311] <3>(12|14) (12|5|1)
0:   turning frequency variant [WBPhenotype:0002312] <2>(12|14) (12|5|1)
- 1:   turning frequency increased [WBPhenotype:0002313](0|0) (0|0|0)
- 1:   turning frequency reduced [WBPhenotype:0002314](1|1) (1|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00000000000005889Direct
SNF-like0.00000000000007044Direct
Nicotinic receptor ligand binding domain-like0.0000000000006098Direct
Insulin-like0.00000000002438Direct
Transducin (heterotrimeric G protein), gamma chain0.0000003264Direct
SMAD MH1 domain0.000004522Direct
Voltage-gated potassium channels0.00001187Direct
Ankyrin repeat0.00005145Direct
SMAD/FHA domain0.0001264Direct
cAMP-binding domain-like0.0002393Direct
P-loop containing nucleoside triphosphate hydrolases0.0008118Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
SNF-like0.0000000000002748Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0000000000013Direct
Nicotinic receptor ligand binding domain-like0.000000000005644Direct
Rhodopsin-like0.0000000002187Direct
Insulin-like0.0000000002387Direct
G proteins0.0000000007306Direct
Transducin (heterotrimeric G protein), gamma chain0.0000006881Direct
SMAD MH1 domain0.000009494Direct
SMAD domain0.00004137Direct
Pyridoxal-dependent decarboxylase0.00007207Direct
Voltage-gated potassium channels0.000218Direct
Ankyrin repeat0.000262Direct
cAMP-binding domain0.000361Direct


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00000000000004622Direct
SNF-like0.00000000000005531Direct
Nicotinic receptor ligand binding domain-like0.00000000000048Direct
Insulin-like0.00000000001926Direct
Transducin (heterotrimeric G protein), gamma chain0.0000002626Direct
SMAD MH1 domain0.000003674Direct
Voltage-gated potassium channels0.000009664Direct
Ankyrin repeat0.0000421Direct
SMAD/FHA domain0.0001036Direct
cAMP-binding domain-like0.0001967Direct
P-loop containing nucleoside triphosphate hydrolases0.0006753Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.00000000000004622Direct
    48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0.00002818Direct
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0001181Direct
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.0004348Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0001569Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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