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Xenopus ANatomical entity (XAN): anatomical direction

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ 1:   Xenopus anatomical entity [XAO:0000000] <9>
0:   anatomical direction [XAO:0003185] <16>(12|16) (12|6|2)
- 1:   animal [XAO:0000297](1|0) (1|1|0)
- 1:   anterior [XAO:0003056](0|0) (0|0|0)
- 1:   deep [XAO:0000301](0|1) (0|0|0)
- 1:   distal [XAO:0003189](0|0) (0|0|0)
- 1:   dorsal [XAO:0000298](0|0) (0|1|0)
- 1:   dorso-lateral [XAO:0000302](1|1) (1|0|0)
- 1:   lateral [XAO:0000304](2|2) (2|0|0)
- 1:   left [XAO:0005005](0|0) (0|0|0)
- 1:   medial [XAO:0003187](0|0) (0|0|0)
- 1:   posterior [XAO:0003057](0|0) (0|0|0)
- 1:   proximal [XAO:0003188](0|0) (0|0|0)
- 1:   right [XAO:0005006](0|0) (0|0|0)
- 1:   superficial [XAO:0000300](0|0) (0|0|0)
- 1:   vegetal [XAO:0000296](0|0) (0|0|0)
- 1:   ventral [XAO:0000299](0|0) (0|0|0)
- 1:   ventro-lateral [XAO:0000303](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
HLH, helix-loop-helix DNA-binding domain0Direct
Homeodomain-like0Direct
Cystine-knot cytokines0.000000003355Direct
Frizzled cysteine-rich domain0.00000003105Direct
"Winged helix" DNA-binding domain0.00000007984Direct
HMG-box0.000002719Direct
Orange domain-like0.000004178Direct
p53-like transcription factors0.00001923Direct
Glucocorticoid receptor-like (DNA-binding domain)0.0000368Direct
Cytokine0.00003958Direct
SMAD MH1 domain0.0003462Direct
RNI-like0.2706Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
HLH, helix-loop-helix DNA-binding domain0Direct
Homeodomain0Direct
Forkhead DNA-binding domain0.0000000000005338Direct
Transforming growth factor (TGF)-beta0.0000000000265Direct
Frizzled cysteine-rich domain0.00000005805Direct
Erythroid transcription factor GATA-10.0000001809Direct
Hairy Orange domain0.000005404Direct
HMG-box0.000005723Direct
ets domain0.00001658Direct
T-box0.00002764Direct
Fibroblast growth factors (FGF)0.00002764Direct
Paired domain0.00004689Direct
Cell cycle control phosphatase, catalytic domain0.0001228Direct
SMAD MH1 domain0.0003881Direct
LIM domain0.0006139Direct
SMAD domain0.0009325Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0Direct
HLH, helix-loop-helix DNA-binding domain0Direct
Cystine-knot cytokines0.000000002352Direct
Frizzled cysteine-rich domain0.00000002186Direct
"Winged helix" DNA-binding domain0.00000005634Direct
HMG-box0.000001949Direct
Orange domain-like0.000003001Direct
p53-like transcription factors0.00001397Direct
Glucocorticoid receptor-like (DNA-binding domain)0.00002691Direct
Cytokine0.00002895Direct
SMAD MH1 domain0.0002596Direct
RNI-like0.2433Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.00000008626Direct
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.000003001Direct
    57603,57603
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 0.00002866Direct
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.000741Direct
    63501,50242
  • 63501 - Frizzled cysteine-rich domain
  • 50242 - TIMP-like
  • 0.000802Direct
    81383,52047
  • 81383 - F-box domain
  • 52047 - RNI-like
  • 0.01238Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57603,57603,57603
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 0.00008139Direct
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.0001806Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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