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Xenopus ANatomical entity (XAN): anatomical line

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ 1:   Xenopus anatomical entity [XAO:0000000] <9>
0:   anatomical line [XAO:0004003] <4>(6|6) (6|2|1)
- 1:   anatomical axis [XAO:0005200] <5>(0|0) (0|0|0)
- 1:   midbrain-hindbrain boundary [XAO:0000016] <1>(4|5) (4|1|1)
- 1:   archenteron roof midline [XAO:0005155](0|0) (0|0|0)
- 1:   forebrain-midbrain boundary [XAO:0005027](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.0000000007915Direct
HMG-box0.000004089Direct
GINS helical bundle-like0.000006716Direct
Frizzled cysteine-rich domain0.00001157Direct
Sema domain0.0004987Direct
HLH, helix-loop-helix DNA-binding domain0.0005368Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.00000001609Direct
HMG-box0.000005428Direct
Paired domain0.00001111Direct
Frizzled cysteine-rich domain0.00001312Direct
Sema domain0.0002414Direct
HLH, helix-loop-helix DNA-binding domain0.0007128Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.0000000005489Direct
HMG-box0.000002908Direct
GINS helical bundle-like0.000004801Direct
Frizzled cysteine-rich domain0.0000083Direct
Sema domain0.000373Direct
HLH, helix-loop-helix DNA-binding domain0.0004023Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
103575,48726
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.000148Direct
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.000373Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    101912,103575,48726
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.000148Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)