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Xenopus ANatomical entity (XAN): ectoderm

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + + + 4:   whole organism [XAO:0003004] <12>(462|598) (466|335|145)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(437|565) (440|325|142)
+ + 2:   tissue [XAO:0003040] <186>(183|249) (189|130|58)
+ + 2:   embryo [XAO:0000113] <8>(134|184) (135|89|38)
+ 1:   primary germ layer [XAO:0003011] <4>(108|153) (108|73|30)
0:   ectoderm [XAO:0000001] <15>(62|84) (62|43|11)
- 1:   epidermis [XAO:0000028] <10>(3|6) (3|2|0)
- 1:   fin [XAO:0000002] <9>(8|8) (9|1|2)
- 1:   neuroectoderm [XAO:0000042] <9>(27|30) (27|15|5)
- 1:   animal cap [XAO:0000036] <2>(1|1) (1|1|0)
- 1:   cranial placode [XAO:0000305] <2>(14|14) (14|6|2)
- 1:   mouth primordium [XAO:0000269] <2>(3|3) (3|0|0)
- 1:   neural plate border [XAO:0004104] <2>(5|6) (6|2|0)
- 1:   non-neural ectoderm [XAO:0004091] <2>(3|3) (3|1|0)
- 1:   hatching gland [XAO:0000034] <1>(0|0) (0|0|0)
- 1:   ectodermal cell [XAO:0003245](0|0) (0|0|0)
- 1:   hypophyseal primordium [XAO:0000267](0|1) (0|0|0)
- 1:   non-involuting marginal zone [XAO:0000253](1|1) (1|2|1)
- 1:   sensorial layer [XAO:0000320](2|2) (2|0|0)
- 1:   stomodeal-hypophyseal primordium [XAO:0000032](3|3) (3|1|0)
- 1:   trunk placode [XAO:0000461](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Subunits of heterodimeric actin filament capping protein Capz0Direct
LuxS/MPP-like metallohydrolase0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
alpha-catenin/vinculin-like0Direct
E2F-DP heterodimerization region0Direct
Uracil-DNA glycosylase-like0Direct
Ribosomal proteins L15p and L18e0Direct
F1F0 ATP synthase subunit C0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Zn-binding ribosomal proteins0Direct
Delta-sleep-inducing peptide immunoreactive peptide0Direct
Ribosomal protein L10-like0Direct
SMAD MH1 domain0Direct
DLC0Direct
Alanine racemase C-terminal domain-like0Direct
Tim10-like0Direct
Subdomain of clathrin and coatomer appendage domain0Direct
Hedgehog/DD-peptidase0Direct
Synuclein0Direct
Ribulose-phoshate binding barrel0Direct
14-3-3 protein0Direct
C-terminal domain of adenylylcyclase associated protein0Direct
Surp module (SWAP domain)0Direct
Nucleoplasmin-like core domain0Direct
PLP-binding barrel0Direct
Moesin tail domain0Direct
Zn-finger domain of Sec23/240Direct
SPOC domain-like0Direct
TK C-terminal domain-like0Direct
PriA/YqbF domain0Direct
RBP11-like subunits of RNA polymerase0Direct
GINS helical bundle-like0Direct
Notch domain0Direct
PAH2 domain0Direct
Nop domain0Direct
Ribosomal L27 protein-like0Direct
RNA-binding domain, RBD0.000001372Direct
Frizzled cysteine-rich domain0.002266Inherited
"Winged helix" DNA-binding domain0.003221Inherited
Homeodomain-like0.003442Inherited
Tubulin C-terminal domain-like0.003995Inherited
Tubulin nucleotide-binding domain-like0.01046Inherited
HLH, helix-loop-helix DNA-binding domain0.02058Inherited
Orange domain-like0.04283Inherited
Sema domain0.0497Inherited
Snake toxin-like0.0539Inherited
Cytokine0.1297Inherited
Intermediate filament protein, coiled coil region0.1304Inherited
Plexin repeat0.1801Inherited
beta-beta-alpha zinc fingers0.2214Inherited
HMG-box0.2324Inherited
Cyclin-like0.3654Inherited
Kazal-type serine protease inhibitors0.4159Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.5721Inherited
TIMP-like0.6513Inherited
lambda repressor-like DNA-binding domains0.7342Inherited
Growth factor receptor domain0.7394Inherited
p53-like transcription factors0.7569Inherited
Cystine-knot cytokines0.9126Inherited
Kringle-like0.9224Inherited
Cadherin-like0.9937Inherited
EGF/Laminin1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
SIAH, seven in absentia homolog0Direct
MPP-like0Direct
GDI-like N domain0Direct
Ferritin0Direct
Ribosomal proteins L15p and L18e0Direct
Delta-sleep-inducing peptide immunoreactive peptide0Direct
Ubiquitin carboxyl-terminal hydrolase UCH-L0Direct
Ran-binding domain0Direct
Nop domain0Direct
P4 origin-binding domain-like0Direct
F1F0 ATP synthase subunit C0Direct
alpha-catenin/vinculin0Direct
Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Notch domain0Direct
Pseudouridine synthase I TruA0Direct
Hedgehog (development protein), N-terminal signaling domain0Direct
Cell cycle transcription factor e2f-dp0Direct
S-adenosylhomocystein hydrolase0Direct
Alpha-adaptin ear subdomain-like0Direct
Nucleoplasmin-like core domain0Direct
C-terminal domain of adenylylcyclase associated protein0Direct
RUNT domain0Direct
Tim10/DDP0Direct
Alanine racemase-like, N-terminal domain0Direct
SMAD domain0Direct
SMAD MH1 domain0Direct
Clathrin adaptor appendage, alpha and beta chain-specific domain0Direct
Extracellular domain of cell surface receptors0Direct
Moesin tail domain0Direct
Branched-chain alpha-keto acid dehydrogenase Pyr module0Direct
CAT-like0Direct
14-3-3 protein0Direct
Zn-finger domain of Sec23/240Direct
TRASH domain0Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain0Direct
NLI interacting factor-like phosphatase0Direct
Noggin0Direct
ECR1 N-terminal domain-like0Direct
SH3BGR (SH3-binding, glutamic acid-rich protein-like)0Direct
Helical domain of Sec23/240Direct
DLC0Direct
Synuclein0Direct
Surp module (SWAP domain)0Direct
PAH2 domain0Direct
E2F dimerization segment0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Prefoldin0Direct
Polo-box duplicated region0Direct
NTF2-like0Direct
Eukaryotic ODC-like0Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain0Direct
HAT/Suf repeat0Direct
Canonical RBD0.000007762Direct
Frizzled cysteine-rich domain0.002251Inherited
Tubulin, GTPase domain0.003917Inherited
Tubulin, C-terminal domain0.003917Inherited
Sema domain0.006111Inherited
Homeodomain0.006628Inherited
HLH, helix-loop-helix DNA-binding domain0.01658Inherited
Forkhead DNA-binding domain0.02496Inherited
Cell cycle control phosphatase, catalytic domain0.03452Inherited
Hairy Orange domain0.03936Inherited
Intermediate filament protein, coiled coil region0.1202Inherited
Fibroblast growth factors (FGF)0.1332Inherited
LIM domain0.1497Inherited
Classic zinc finger, C2H20.1539Inherited
Plexin repeat0.1834Inherited
Arginine methyltransferase0.1897Inherited
HMG-box0.21Inherited
POU-specific domain0.2199Inherited
Ephrin receptor ligand binding domain0.2319Inherited
Glutathione peroxidase-like0.2563Inherited
Cyclin0.2579Inherited
Ovomucoid domain III-like0.4063Inherited
Growth factor receptor domain0.4703Inherited
ets domain0.5515Inherited
Multidrug efflux transporter AcrB transmembrane domain0.6361Inherited
Transforming growth factor (TGF)-beta0.6862Inherited
Paired domain0.7391Inherited
T-box0.9826Inherited
Kringle modules1Inherited
Calmodulin-like1Inherited


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Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Delta-sleep-inducing peptide immunoreactive peptide0Direct
GINS helical bundle-like0Direct
PriA/YqbF domain0Direct
DLC0Direct
RBP11-like subunits of RNA polymerase0Direct
LuxS/MPP-like metallohydrolase0Direct
Notch domain0Direct
Moesin tail domain0Direct
E2F-DP heterodimerization region0Direct
Ribosomal protein L10-like0Direct
Synuclein0Direct
PAH2 domain0Direct
Tim10-like0Direct
Zn-finger domain of Sec23/240Direct
F1F0 ATP synthase subunit C0Direct
Surp module (SWAP domain)0Direct
SMAD MH1 domain0Direct
Ribulose-phoshate binding barrel0Direct
14-3-3 protein0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
SPOC domain-like0Direct
Zn-binding ribosomal proteins0Direct
Alanine racemase C-terminal domain-like0Direct
Ribosomal proteins L15p and L18e0Direct
Uracil-DNA glycosylase-like0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Subdomain of clathrin and coatomer appendage domain0Direct
Nop domain0Direct
Ribosomal L27 protein-like0Direct
Hedgehog/DD-peptidase0Direct
C-terminal domain of adenylylcyclase associated protein0Direct
PLP-binding barrel0Direct
TK C-terminal domain-like0Direct
alpha-catenin/vinculin-like0Direct
Nucleoplasmin-like core domain0Direct
RNA-binding domain, RBD0.0000009799Direct
Frizzled cysteine-rich domain0.001739Inherited
"Winged helix" DNA-binding domain0.002479Inherited
Homeodomain-like0.002651Inherited
Tubulin C-terminal domain-like0.003087Inherited
Tubulin nucleotide-binding domain-like0.008213Inherited
HLH, helix-loop-helix DNA-binding domain0.01634Inherited
Orange domain-like0.03504Inherited
Sema domain0.04085Inherited
Snake toxin-like0.04438Inherited
Cytokine0.1118Inherited
Intermediate filament protein, coiled coil region0.1125Inherited
Plexin repeat0.1581Inherited
beta-beta-alpha zinc fingers0.1967Inherited
HMG-box0.2072Inherited
Cyclin-like0.3345Inherited
Kazal-type serine protease inhibitors0.3836Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.5359Inherited
TIMP-like0.6152Inherited
lambda repressor-like DNA-binding domains0.6991Inherited
Growth factor receptor domain0.7046Inherited
p53-like transcription factors0.7223Inherited
Cystine-knot cytokines0.8843Inherited
Kringle-like0.8945Inherited
Cadherin-like0.9686Inherited
EGF/Laminin1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
82615,82615
  • 82615 - Polo-box domain
  • 82615 - Polo-box domain
  • 0Direct
    48371,46785
  • 48371 - ARM repeat
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    47095,47095
  • 47095 - HMG-box
  • 47095 - HMG-box
  • 0Direct
    46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
  • 0Direct
    63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0Direct
    57756,57756
  • 57756 - Retrovirus zinc finger-like domains
  • 57756 - Retrovirus zinc finger-like domains
  • 0Direct
    52518,52518
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 0Direct
    82919,53300
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 0Direct
    52540,46785
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 0Direct
    47220,47220
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0Direct
    51230,47005
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 0Direct
    47005,52777
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    52518,52922
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52922 - TK C-terminal domain-like
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    51419,50621
  • 51419 - PLP-binding barrel
  • 50621 - Alanine racemase C-terminal domain-like
  • 0Direct
    57196,90193
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 0Direct
    110324,50249
  • 110324 - Ribosomal L27 protein-like
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    53223,51735
  • 53223 - Aminoacid dehydrogenase-like, N-terminal domain
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 0Direct
    57184,49265
  • 57184 - Growth factor receptor domain
  • 49265 - Fibronectin type III
  • 0Direct
    49348,55711
  • 49348 - Clathrin adaptor appendage domain
  • 55711 - Subdomain of clathrin and coatomer appendage domain
  • 0Direct
    52540,53254
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 53254 - Phosphoglycerate mutase-like
  • 0Direct
    57184,100895
  • 57184 - Growth factor receptor domain
  • 100895 - Kazal-type serine protease inhibitors
  • 0Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.0008401Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.003087Inherited
    103575,48726
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.01574Inherited
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.0247Inherited
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.03504Inherited
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.03904Inherited
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.04085Inherited
    63501,50242
  • 63501 - Frizzled cysteine-rich domain
  • 50242 - TIMP-like
  • 0.06072Inherited
    50729,56112
  • 50729 - PH domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0.06072Inherited
    57603,57603
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 0.0618Inherited
    64593,64593
  • 64593 - Intermediate filament protein, coiled coil region
  • 64593 - Intermediate filament protein, coiled coil region
  • 0.1153Inherited
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.1786Inherited
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.2171Inherited
    56112,47769
  • 56112 - Protein kinase-like (PK-like)
  • 47769 - SAM/Pointed domain
  • 0.3212Inherited
    57440,57440
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 0.3212Inherited
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.5563Inherited
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.6576Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.8401Inherited
    81383,52047
  • 81383 - F-box domain
  • 52047 - RNI-like
  • 0.8482Inherited
    49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.9765Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50249,50249,50249
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    51230,47005,52777
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    54791,54791,54791
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 0Direct
    47220,47220,47220
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0Direct
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0Direct
    101912,103575,48726
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.01574Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.01926Inherited
    50044,55550,56112
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.08828Inherited
    48371,48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.4732Inherited
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.7539Inherited
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.8855Inherited


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