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Xenopus ANatomical entity (XAN): neuroectoderm

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   whole organism [XAO:0003004] <12>(464|596) (467|333|144)
+ + + 3:   embryo [XAO:0000113] <8>(132|182) (134|88|37)
+ + + 3:   anatomical structure [XAO:0003000] <11>(576|729) (576|397|162)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(438|563) (440|323|141)
+ + 2:   primary germ layer [XAO:0003011] <4>(106|150) (107|72|29)
+ 1:   tissue [XAO:0003040] <186>(182|249) (188|129|56)
+ 1:   ectoderm [XAO:0000001] <15>(62|84) (62|43|11)
0:   neuroectoderm [XAO:0000042] <9>(26|29) (26|15|5)
- 1:   neural plate [XAO:0000249] <10>(18|17) (18|7|3)
- 1:   neural crest [XAO:0000048] <8>(11|14) (11|6|2)
- 1:   cranial placode [XAO:0000305] <2>(14|14) (14|6|2)
- 1:   sensorial layer of neurectoderm [XAO:0000270] <1>(6|4) (7|2|1)
- 1:   anterior neuroectoderm [XAO:0005263](0|0) (0|0|0)
- 1:   neurocoel [XAO:0000252](0|0) (0|0|0)
- 1:   neuroectoderm inner layer [XAO:0000044](0|0) (0|0|0)
- 1:   neuroectoderm outer layer [XAO:0000043](2|2) (2|0|0)
- 1:   superficial layer of neurectoderm [XAO:0005241](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
GINS helical bundle-like0Direct
Synuclein0Direct
PriA/YqbF domain0Direct
HLH, helix-loop-helix DNA-binding domain0Direct
Homeodomain-like0Direct
Hedgehog/DD-peptidase0Direct
"Winged helix" DNA-binding domain0.0000000006063Direct
Cytokine0.000000001968Direct
Frizzled cysteine-rich domain0.000000004041Direct
Sema domain0.0000216Direct
Glucocorticoid receptor-like (DNA-binding domain)0.00002961Direct
Plexin repeat0.00003737Direct
p53-like transcription factors0.00009806Direct
HMG-box0.0001598Direct
lambda repressor-like DNA-binding domains0.0002578Direct
Orange domain-like0.00034Direct
Snake toxin-like0.0004174Direct
Cystine-knot cytokines0.001002Inherited
Cadherin-like0.001333Inherited
Kazal-type serine protease inhibitors0.007377Inherited
TIMP-like0.008655Inherited
EGF/Laminin0.02387Inherited
beta-beta-alpha zinc fingers0.02721Inherited
Growth factor receptor domain0.07073Inherited
Cyclin-like0.1377Inherited
Kringle-like0.1616Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Hedgehog (development protein), N-terminal signaling domain0Direct
RUNT domain0Direct
Noggin0Direct
Homeodomain0Direct
Extracellular domain of cell surface receptors0Direct
Synuclein0Direct
HLH, helix-loop-helix DNA-binding domain0.000000000000004432Direct
Forkhead DNA-binding domain0.0000000000002023Direct
Frizzled cysteine-rich domain0.000000009263Direct
Fibroblast growth factors (FGF)0.00000001391Direct
Sema domain0.00000411Direct
POU-specific domain0.00003078Direct
Plexin repeat0.00007372Direct
Cell cycle control phosphatase, catalytic domain0.0001295Direct
HMG-box0.0002881Direct
Hairy Orange domain0.0003983Direct
P4 origin-binding domain-like0.0009157Direct
Classic zinc finger, C2H20.001081Inherited
LIM domain0.001289Inherited
Paired domain0.001385Inherited
ets domain0.002124Inherited
Ovomucoid domain III-like0.004551Inherited
Transforming growth factor (TGF)-beta0.007454Inherited
T-box0.01697Inherited
Glutathione peroxidase-like0.02235Inherited
Arginine methyltransferase0.03301Inherited
Cyclin0.04045Inherited
Ephrin receptor ligand binding domain0.09553Inherited
Kringle modules0.1473Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
HLH, helix-loop-helix DNA-binding domain0Direct
PriA/YqbF domain0Direct
Hedgehog/DD-peptidase0Direct
Homeodomain-like0Direct
GINS helical bundle-like0Direct
Synuclein0Direct
"Winged helix" DNA-binding domain0.0000000004249Direct
Cytokine0.000000001381Direct
Frizzled cysteine-rich domain0.000000002839Direct
Sema domain0.00001573Direct
Glucocorticoid receptor-like (DNA-binding domain)0.00002163Direct
Plexin repeat0.00002736Direct
p53-like transcription factors0.00007251Direct
HMG-box0.0001188Direct
lambda repressor-like DNA-binding domains0.0001927Direct
Orange domain-like0.0002551Direct
Snake toxin-like0.0003139Direct
Cystine-knot cytokines0.0007611Direct
Cadherin-like0.001017Inherited
Kazal-type serine protease inhibitors0.005768Inherited
TIMP-like0.006774Inherited
EGF/Laminin0.01904Inherited
beta-beta-alpha zinc fingers0.02182Inherited
Growth factor receptor domain0.05879Inherited
Cyclin-like0.1193Inherited
Kringle-like0.141Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.00000027Direct
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.00001573Direct
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.0002551Direct
    81383,52047
  • 81383 - F-box domain
  • 52047 - RNI-like
  • 0.0003139Direct
    50729,56112
  • 50729 - PH domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0.0004862Direct
    63501,50242
  • 63501 - Frizzled cysteine-rich domain
  • 50242 - TIMP-like
  • 0.0004862Direct
    103575,48726
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.0006492Direct
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.0006561Direct
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.0007473Direct
    49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.001755Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.003646Inherited
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.0119Inherited
    57603,57603
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 0.01424Inherited
    56112,47769
  • 56112 - Protein kinase-like (PK-like)
  • 47769 - SAM/Pointed domain
  • 0.04783Inherited
    57440,57440
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 0.07773Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    101912,103575,48726
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.0006492Direct
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.0007255Direct
    50044,55550,56112
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.0009539Direct
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.009887Inherited
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0119Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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