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Xenopus ANatomical entity (XAN): intestine

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + 4:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + + + 4:   whole organism [XAO:0003004] <12>(462|598) (466|335|145)
+ + + + 4:   anatomical region [XAO:0003186] <51>(371|484) (374|284|123)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(437|565) (440|325|142)
+ + + 3:   organism subdivision [XAO:0003013] <11>(376|498) (381|292|126)
+ + + 3:   anatomical group [XAO:0003001] <2>(415|530) (419|309|134)
+ + + 3:   trunk region [XAO:0000054] <1>(216|300) (216|157|82)
+ + 2:   anatomical system [XAO:0003002] <19>(284|382) (290|204|93)
+ + 2:   anatomical cluster [XAO:0003160] <43>(94|141) (96|75|38)
+ + 2:   compound organ [XAO:0003041] <8>(333|444) (336|275|125)
+ + 2:   trunk [XAO:0003025] <10>(215|299) (215|157|82)
+ 1:   viscus [XAO:0003034] <9>(64|96) (66|45|21)
+ 1:   alimentary system [XAO:0000125] <30>(64|98) (65|46|19)
+ 1:   cavitated compound organ [XAO:0003165] <21>(287|395) (292|247|114)
0:   intestine [XAO:0000129] <5>(25|42) (25|16|7)
- 1:   small intestine [XAO:0000130] <6>(2|2) (2|0|0)
- 1:   large intestine [XAO:0000131] <3>(1|1) (1|0|0)
- 1:   adult intestinal epithelium [XAO:0005004](0|0) (0|0|0)
- 1:   larval intestinal epithelium [XAO:0005003](0|0) (0|0|0)
- 1:   typhlosole [XAO:0005067](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Subunits of heterodimeric actin filament capping protein Capz0Direct
BSD domain-like0Direct
4Fe-4S ferredoxins0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Apolipoprotein A-I0Direct
Alanine racemase C-terminal domain-like0Direct
Succinyl-CoA synthetase domains0Direct
Hedgehog/DD-peptidase0Direct
MAPEG domain-like0Direct
Surp module (SWAP domain)0Direct
PLP-binding barrel0Direct
Moesin tail domain0Direct
SCP-like0Direct
Amidase signature (AS) enzymes0Direct
Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain0Direct
Isocitrate/Isopropylmalate dehydrogenase-like0Direct
PAH2 domain0Direct
Thiolase-like0Direct
WD40 repeat-like0.00001554Direct
RNA-binding domain, RBD0.00001717Direct
PLP-dependent transferases0.00006006Direct
ALDH-like0.0006377Direct
NAD(P)-binding Rossmann-fold domains0.0009897Direct
Homeodomain-like1Inherited
Frizzled cysteine-rich domain1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
BSD domain0Direct
Transferrin0Direct
MAPEG domain0Direct
MSP-like0Direct
Phosphoribosylpyrophosphate synthetase-like0Direct
Pumilio repeat0Direct
Dimeric isocitrate & isopropylmalate dehydrogenases0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Thiolase-related0Direct
Glyoxalase II (hydroxyacylglutathione hydrolase)0Direct
Hedgehog (development protein), N-terminal signaling domain0Direct
S-adenosylhomocystein hydrolase0Direct
PDI-like0Direct
Alpha-adaptin ear subdomain-like0Direct
Apolipoprotein A-I0Direct
Alanine racemase-like, N-terminal domain0Direct
D-aminoacid oxidase-like0Direct
Clathrin adaptor appendage, alpha and beta chain-specific domain0Direct
Moesin tail domain0Direct
Succinyl-CoA synthetase domains0Direct
gamma-adaptin C-terminal appendage domain-like0Direct
IP3 receptor type 1 binding core, domain 20Direct
Arginase-like amidino hydrolases0Direct
Amidase signature (AS) enzymes0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
GABARAP-like0Direct
Surp module (SWAP domain)0Direct
PAH2 domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Neurolysin-like0Direct
Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain0Direct
Sterol carrier protein, SCP0Direct
Eukaryotic ODC-like0Direct
Protein-L-isoaspartyl O-methyltransferase0Direct
Malic enzyme N-domain0Direct
Anticodon-binding domain of Class II aaRS0Direct
Canonical RBD0.0000002212Direct
GABA-aminotransferase-like0.000146Direct
WD40-repeat0.0003435Direct
ALDH-like0.0005313Direct
Frizzled cysteine-rich domain1Inherited
Homeodomain1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SCP-like0Direct
4Fe-4S ferredoxins0Direct
Moesin tail domain0Direct
MAPEG domain-like0Direct
Apolipoprotein A-I0Direct
PAH2 domain0Direct
Surp module (SWAP domain)0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain0Direct
Thiolase-like0Direct
BSD domain-like0Direct
Alanine racemase C-terminal domain-like0Direct
Isocitrate/Isopropylmalate dehydrogenase-like0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Hedgehog/DD-peptidase0Direct
Succinyl-CoA synthetase domains0Direct
Amidase signature (AS) enzymes0Direct
PLP-binding barrel0Direct
WD40 repeat-like0.00001125Direct
RNA-binding domain, RBD0.00001244Direct
PLP-dependent transferases0.00004413Direct
ALDH-like0.000482Direct
NAD(P)-binding Rossmann-fold domains0.0007519Direct
Homeodomain-like1Inherited
Frizzled cysteine-rich domain1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47095,47095
  • 47095 - HMG-box
  • 47095 - HMG-box
  • 0Direct
    53300,81995
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 0Direct
    49899,52540
  • 49899 - Concanavalin A-like lectins/glucanases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    56059,52210
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 52210 - Succinyl-CoA synthetase domains
  • 0Direct
    55486,48371
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 48371 - ARM repeat
  • 0Direct
    53901,53901
  • 53901 - Thiolase-like
  • 53901 - Thiolase-like
  • 0Direct
    54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 0Direct
    81995,81811
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct
    53850,53850
  • 53850 - Periplasmic binding protein-like II
  • 53850 - Periplasmic binding protein-like II
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    51419,50621
  • 51419 - PLP-binding barrel
  • 50621 - Alanine racemase C-terminal domain-like
  • 0Direct
    57924,57924
  • 57924 - Inhibitor of apoptosis (IAP) repeat
  • 57924 - Inhibitor of apoptosis (IAP) repeat
  • 0Direct
    54160,57850
  • 54160 - Chromo domain-like
  • 57850 - RING/U-box
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0Direct
    57184,49899
  • 57184 - Growth factor receptor domain
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.00005231Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    81995,81811,82754
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0Direct
    50249,50249,50249
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    63737,55486,48371
  • 63737 - Leukotriene A4 hydrolase N-terminal domain
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 48371 - ARM repeat
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0Direct
    54160,57850,57845
  • 54160 - Chromo domain-like
  • 57850 - RING/U-box
  • 57845 - B-box zinc-binding domain
  • 0Direct
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0Direct
    53300,81995,81811
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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