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Xenopus ANatomical entity (XAN): musculoskeletal system

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   whole organism [XAO:0003004] <12>(464|596) (467|333|144)
+ + + 3:   anatomical structure [XAO:0003000] <11>(576|729) (576|397|162)
+ + 2:   anatomical group [XAO:0003001] <2>(419|531) (421|308|133)
+ 1:   anatomical system [XAO:0003002] <19>(286|380) (291|204|92)
0:   musculoskeletal system [XAO:0000168] <2>(44|60) (46|26|15)
- 1:   muscular system [XAO:0004042] <4>(28|40) (31|17|8)
- 1:   skeletal system [XAO:0003060] <3>(17|17) (17|7|4)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Mitochondrial cytochrome c oxidase subunit VIIa0Direct
F1F0 ATP synthase subunit C0Direct
4Fe-4S ferredoxins0Direct
DnaJ/Hsp40 cysteine-rich domain0Direct
Troponin coil-coiled subunits0Direct
FMT C-terminal domain-like0Direct
HSP90 C-terminal domain0Direct
SRF-like0Direct
ADP-ribosylglycohydrolase0Direct
alpha-ketoacid dehydrogenase kinase, N-terminal domain0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
HLH, helix-loop-helix DNA-binding domain0.000001268Direct
RNA-binding domain, RBD0.0001547Direct
GroEL equatorial domain-like0.0003343Direct
HSP20-like chaperones0.0004025Direct
Orange domain-like0.0005558Direct
GroEL-intermediate domain like0.0005558Direct
Translation proteins SH3-like domain0.0008292Direct
Homeodomain-like0.001639Inherited
GroEL apical domain-like0.002134Inherited
Cytokine0.003176Inherited
Thioredoxin-like0.003748Inherited
Acyl-CoA dehydrogenase NM domain-like0.003999Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.003999Inherited
UBC-like0.006824Inherited
Actin depolymerizing proteins0.008763Inherited
Zn-binding ribosomal proteins0.009933Inherited
LDH C-terminal domain-like0.02473Inherited
Frizzled cysteine-rich domain0.03058Inherited
p53-like transcription factors0.03509Inherited
Actin-like ATPase domain0.0397Inherited
Spectrin repeat0.0472Inherited
Thiolase-like0.04811Inherited
Heat shock protein 70kD (HSP70), peptide-binding domain0.05238Inherited
HMG-box0.05386Inherited
Myosin rod fragments0.05788Inherited
Tropomyosin0.06499Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.06574Inherited
14-3-3 protein0.08266Inherited
Annexin0.09531Inherited
EF-hand0.1053Inherited
PYP-like sensor domain (PAS domain)0.2785Inherited
FnI-like domain0.3397Inherited
Cystine-knot cytokines0.7731Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Troponin T0Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain0Direct
GABARAP-like0Direct
GDI-like N domain0Direct
Hsp90 middle domain0Direct
DnaJ/Hsp40 cysteine-rich domain0Direct
Noncollagenous (NC1) domain of collagen IV0Direct
alpha-ketoacid dehydrogenase kinase, C-terminal domain0Direct
SRF-like0Direct
Mitochondrial cytochrome c oxidase subunit VIIa0Direct
Troponin I0Direct
A20-like zinc finger0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Malic enzyme N-domain0Direct
ADP-ribosylglycohydrolase0Direct
RUNT domain0Direct
HSP90 C-terminal domain0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
DJ-1/PfpI0Direct
Noggin0Direct
Heat shock protein 90, HSP90, N-terminal domain0Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain0Direct
F1F0 ATP synthase subunit C0Direct
alpha-ketoacid dehydrogenase kinase, N-terminal domain0Direct
gamma-adaptin C-terminal appendage domain-like0Direct
HLH, helix-loop-helix DNA-binding domain0.000004893Direct
Canonical RBD0.000008839Direct
Medium chain acyl-CoA dehydrogenase-like, C-terminal domain0.00009255Direct
Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains0.00009255Direct
Proteasome subunits0.0001148Direct
Hairy Orange domain0.0006261Direct
Group II chaperonin (CCT, TRIC), apical domain0.001609Inherited
Group II chaperonin (CCT, TRIC), ATPase domain0.002756Inherited
Glutathione peroxidase-like0.003627Inherited
Actin/HSP700.003991Inherited
Fibroblast growth factors (FGF)0.007881Inherited
Homeodomain0.008438Inherited
Parvalbumin0.01006Inherited
Translational machinery components0.01894Inherited
Thiolase-related0.01894Inherited
Paired domain0.01894Inherited
LIM domain0.02098Inherited
T-box0.02179Inherited
Lactate & malate dehydrogenases, C-terminal domain0.02428Inherited
LDH N-terminal domain-like0.02428Inherited
Linker histone H1/H50.02428Inherited
Frizzled cysteine-rich domain0.03608Inherited
Spectrin repeat0.03608Inherited
Myosin rod fragments0.03999Inherited
Heat shock protein 70kD (HSP70), peptide-binding domain0.05613Inherited
Tropomyosin0.05688Inherited
HMG-box0.07111Inherited
L domain0.08255Inherited
14-3-3 protein0.08255Inherited
Hypoxia-inducible factor Hif2a, C-terminal domain0.1011Inherited
Forkhead DNA-binding domain0.1738Inherited
28-residue LRR0.2694Inherited
Extracellular domain of cell surface receptors0.2866Inherited
Erythroid transcription factor GATA-10.3686Inherited
Motor proteins0.6836Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
ADP-ribosylglycohydrolase0Direct
HSP90 C-terminal domain0Direct
4Fe-4S ferredoxins0Direct
Mitochondrial cytochrome c oxidase subunit VIIa0Direct
F1F0 ATP synthase subunit C0Direct
alpha-ketoacid dehydrogenase kinase, N-terminal domain0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Troponin coil-coiled subunits0Direct
FMT C-terminal domain-like0Direct
DnaJ/Hsp40 cysteine-rich domain0Direct
SRF-like0Direct
HLH, helix-loop-helix DNA-binding domain0.000000906Direct
RNA-binding domain, RBD0.000115Direct
GroEL equatorial domain-like0.0002508Direct
HSP20-like chaperones0.0003025Direct
GroEL-intermediate domain like0.0004197Direct
Orange domain-like0.0004197Direct
Translation proteins SH3-like domain0.0006291Direct
Homeodomain-like0.001255Inherited
GroEL apical domain-like0.001639Inherited
Cytokine0.002451Inherited
Thioredoxin-like0.002894Inherited
Acyl-CoA dehydrogenase NM domain-like0.003093Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.003093Inherited
UBC-like0.00533Inherited
Actin depolymerizing proteins0.006861Inherited
Zn-binding ribosomal proteins0.007795Inherited
LDH C-terminal domain-like0.01975Inherited
Pentein0.01975Inherited
Frizzled cysteine-rich domain0.02462Inherited
p53-like transcription factors0.02842Inherited
Actin-like ATPase domain0.03236Inherited
Spectrin repeat0.03873Inherited
Thiolase-like0.03951Inherited
Heat shock protein 70kD (HSP70), peptide-binding domain0.04307Inherited
HMG-box0.04428Inherited
Myosin rod fragments0.04774Inherited
Tropomyosin0.05379Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.05445Inherited
14-3-3 protein0.06913Inherited
Annexin0.08054Inherited
EF-hand0.08942Inherited
Translation proteins0.09078Inherited
PYP-like sensor domain (PAS domain)0.2508Inherited
FnI-like domain0.3098Inherited
Cystine-knot cytokines0.7399Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57938,49493
  • 57938 - DnaJ/Hsp40 cysteine-rich domain
  • 49493 - HSP40/DnaJ peptide-binding domain
  • 0Direct
    69012,55874
  • 69012 - alpha-ketoacid dehydrogenase kinase, N-terminal domain
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 0Direct
    46966,47473
  • 46966 - Spectrin repeat
  • 47473 - EF-hand
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0Direct
    46565,57938
  • 46565 - Chaperone J-domain
  • 57938 - DnaJ/Hsp40 cysteine-rich domain
  • 0Direct
    52540,53254
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 53254 - Phosphoglycerate mutase-like
  • 0Direct
    90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0Direct
    48371,46785
  • 48371 - ARM repeat
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    54631,54631
  • 54631 - CBS-domain pair
  • 54631 - CBS-domain pair
  • 0Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.0000614Direct
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.0004197Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.001131Inherited
    56645,47203
  • 56645 - Acyl-CoA dehydrogenase NM domain-like
  • 47203 - Acyl-CoA dehydrogenase C-terminal domain-like
  • 0.003093Inherited
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.006861Inherited
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.008628Inherited
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.01091Inherited
    47095,47095
  • 47095 - HMG-box
  • 47095 - HMG-box
  • 0.01975Inherited
    51735,56327
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 56327 - LDH C-terminal domain-like
  • 0.01975Inherited
    100920,100934
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.03233Inherited
    53901,53901
  • 53901 - Thiolase-like
  • 53901 - Thiolase-like
  • 0.03951Inherited
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.04307Inherited
    48726,56436
  • 48726 - Immunoglobulin
  • 56436 - C-type lectin-like
  • 0.04863Inherited
    52058,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.06913Inherited
    57184,52058
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.06913Inherited
    57184,57184
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.07773Inherited
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 1Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    46966,46966,47473
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 47473 - EF-hand
  • 0Direct
    90257,90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0Direct
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0Direct
    57938,49493,49493
  • 57938 - DnaJ/Hsp40 cysteine-rich domain
  • 49493 - HSP40/DnaJ peptide-binding domain
  • 49493 - HSP40/DnaJ peptide-binding domain
  • 0Direct
    51338,51556,51338
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 51556 - Metallo-dependent hydrolases
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 0Direct
    46565,57938,49493
  • 46565 - Chaperone J-domain
  • 57938 - DnaJ/Hsp40 cysteine-rich domain
  • 49493 - HSP40/DnaJ peptide-binding domain
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0018Inherited
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.01531Inherited
    57196,57184,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.01975Inherited
    53067,100920,100934
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.03233Inherited
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.04307Inherited
    48726,56436,56436
  • 48726 - Immunoglobulin
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0.04863Inherited
    48371,48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.06008Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.2225Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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