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Xenopus ANatomical entity (XAN): viscus

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   whole organism [XAO:0003004] <12>(464|596) (467|333|144)
+ + + 3:   anatomical region [XAO:0003186] <51>(374|484) (375|284|123)
+ + + 3:   anatomical structure [XAO:0003000] <11>(576|729) (576|397|162)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(438|563) (440|323|141)
+ + 2:   anatomical group [XAO:0003001] <2>(419|531) (421|308|133)
+ + 2:   trunk region [XAO:0000054] <1>(217|300) (217|157|82)
+ + 2:   organism subdivision [XAO:0003013] <11>(379|498) (382|291|126)
+ 1:   anatomical cluster [XAO:0003160] <43>(94|140) (96|75|38)
+ 1:   trunk [XAO:0003025] <10>(216|299) (216|157|82)
0:   viscus [XAO:0003034] <9>(64|95) (66|45|21)
- 1:   heart [XAO:0000064] <18>(13|15) (15|6|4)
- 1:   intestine [XAO:0000129] <5>(25|42) (25|16|7)
- 1:   liver [XAO:0000133] <3>(6|12) (7|11|4)
- 1:   pancreas [XAO:0000136] <3>(9|9) (9|7|1)
- 1:   stomach [XAO:0000128] <2>(4|4) (4|0|0)
- 1:   lung [XAO:0000119] <1>(0|0) (0|0|0)
- 1:   bladder [XAO:0000154](0|0) (0|0|0)
- 1:   gall bladder [XAO:0000135](1|1) (1|0|0)
- 1:   spleen [XAO:0000328](1|0) (1|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Glutamine synthetase/guanido kinase0Direct
Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain0Direct
F1F0 ATP synthase subunit C0Direct
4Fe-4S ferredoxins0Direct
Fibrinogen coiled-coil and central regions0Direct
Guanido kinase N-terminal domain0Direct
SCP-like0Direct
BSD domain-like0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
Surp module (SWAP domain)0Direct
TK C-terminal domain-like0Direct
PLP-binding barrel0Direct
MAPEG domain-like0Direct
AraD/HMP-PK domain-like0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
PAH2 domain0Direct
Apolipoprotein A-I0Direct
TGS-like0Direct
Mannose 6-phosphate receptor domain0Direct
N-acetylmuramoyl-L-alanine amidase-like0Direct
Aminomethyltransferase beta-barrel domain0Direct
Amidase signature (AS) enzymes0Direct
Succinyl-CoA synthetase domains0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
eIF1-like0Direct
Thiolase-like0Direct
NAP-like0Direct
Delta-sleep-inducing peptide immunoreactive peptide0Direct
Alanine racemase C-terminal domain-like0Direct
Moesin tail domain0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Hedgehog/DD-peptidase0Direct
ACP-like0Direct
Isocitrate/Isopropylmalate dehydrogenase-like0Direct
NAD(P)-binding Rossmann-fold domains0.001543Inherited
ALDH-like0.001697Inherited
PLP-dependent transferases0.007425Inherited
RNA-binding domain, RBD0.02092Inherited
Trypsin-like serine proteases0.02243Inherited
Thiamin diphosphate-binding fold (THDP-binding)0.03651Inherited
Translation proteins SH3-like domain0.05209Inherited
Translational machinery components0.07384Inherited
Leukotriene A4 hydrolase N-terminal domain0.07397Inherited
SMAD MH1 domain0.1444Inherited
SMAD/FHA domain0.1469Inherited
WD40 repeat-like0.1483Inherited
Actin-like ATPase domain0.1848Inherited
MHC antigen-recognition domain0.2715Inherited
Zn-binding ribosomal proteins0.3017Inherited
HMG-box0.3183Inherited
EGF/Laminin0.4703Inherited
"Winged helix" DNA-binding domain0.4733Inherited
p53-like transcription factors0.7447Inherited
Troponin coil-coiled subunits0.7728Inherited
Snake toxin-like0.8214Inherited
Growth factor receptor domain1Inherited
Cystine-knot cytokines1Inherited
Frizzled cysteine-rich domain1Inherited
Tropomyosin1Inherited
HLH, helix-loop-helix DNA-binding domain1Inherited
Homeodomain-like1Inherited
EF-hand1Inherited
Immunoglobulin1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
BSD domain0Direct
Protein-L-isoaspartyl O-methyltransferase0Direct
Arginase-like amidino hydrolases0Direct
Alanine racemase-like, N-terminal domain0Direct
RuBisCo LSMT catalytic domain0Direct
S-adenosylhomocystein hydrolase0Direct
Transferrin0Direct
D-aminoacid oxidase-like0Direct
GABARAP-like0Direct
Variant RING domain0Direct
Fibronectin type I module0Direct
Crotonase-like0Direct
Steroid-binding domain0Direct
Threonyl-tRNA synthetase (ThrRS), second 'additional' domain0Direct
Anticodon-binding domain of Class II aaRS0Direct
Aminomethyltransferase beta-barrel domain0Direct
Clathrin adaptor appendage, alpha and beta chain-specific domain0Direct
Hedgehog (development protein), N-terminal signaling domain0Direct
Moesin tail domain0Direct
Guanido kinase N-terminal domain0Direct
Alpha-adaptin ear subdomain-like0Direct
HAT/Suf repeat0Direct
Noncollagenous (NC1) domain of collagen IV0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
MAPEG domain0Direct
CAT-like0Direct
PDI-like0Direct
Chromo barrel domain0Direct
N-acetylmuramoyl-L-alanine amidase-like0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
Thiolase-related0Direct
UDPGT-like0Direct
alpha-catenin/vinculin0Direct
AraD-like aldolase/epimerase0Direct
Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Succinyl-CoA synthetase domains0Direct
Hypoxia-inducible factor HIF ihhibitor (FIH1)0Direct
Malic enzyme N-domain0Direct
Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain0Direct
Fibronectin type II module0Direct
MSP-like0Direct
Glyoxalase II (hydroxyacylglutathione hydrolase)0Direct
NAP-like0Direct
Phosphoribosylpyrophosphate synthetase-like0Direct
Neurolysin-like0Direct
Sterol carrier protein, SCP0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
Fibrinogen coiled-coil and central regions0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Surp module (SWAP domain)0Direct
Eukaryotic ODC-like0Direct
HCDH C-domain-like0Direct
Mannose 6-phosphate receptor domain0Direct
Delta-sleep-inducing peptide immunoreactive peptide0Direct
F1F0 ATP synthase subunit C0Direct
IP3 receptor type 1 binding core, domain 20Direct
Guanido kinase catalytic domain0Direct
Ferritin0Direct
Dimeric isocitrate & isopropylmalate dehydrogenases0Direct
gamma-adaptin C-terminal appendage domain-like0Direct
Amidase signature (AS) enzymes0Direct
eIF1-like0Direct
Apolipoprotein A-I0Direct
DNA ligase0Direct
Pumilio repeat0Direct
PAH2 domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
ALDH-like0.001555Inherited
Canonical RBD0.002098Inherited
GABA-aminotransferase-like0.002218Inherited
Leukotriene A4 hydrolase N-terminal domain0.01266Inherited
Eukaryotic proteases0.01924Inherited
Class I aldolase0.03843Inherited
Actin/HSP700.08912Inherited
SMAD domain0.09816Inherited
Leukotriene A4 hydrolase catalytic domain0.09816Inherited
Complement components0.137Inherited
SMAD MH1 domain0.137Inherited
Erythroid transcription factor GATA-10.1952Inherited
MHC antigen-recognition domain0.2601Inherited
WD40-repeat0.2755Inherited
HMG-box0.3346Inherited
LIM domain0.3484Inherited
Lectin leg-like0.3535Inherited
Translational machinery components0.6612Inherited
Calmodulin-like0.815Inherited
T-box0.8842Inherited
Forkhead DNA-binding domain0.9774Inherited
Frizzled cysteine-rich domain0.9911Inherited
Tropomyosin1Inherited
Growth factor receptor domain1Inherited
HLH, helix-loop-helix DNA-binding domain1Inherited
Homeodomain1Inherited
Transforming growth factor (TGF)-beta1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
N-acetylmuramoyl-L-alanine amidase-like0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
Isocitrate/Isopropylmalate dehydrogenase-like0Direct
Thiolase-like0Direct
Mannose 6-phosphate receptor domain0Direct
ACP-like0Direct
Moesin tail domain0Direct
AraD/HMP-PK domain-like0Direct
Delta-sleep-inducing peptide immunoreactive peptide0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
4Fe-4S ferredoxins0Direct
eIF1-like0Direct
TGS-like0Direct
SCP-like0Direct
NAP-like0Direct
Hedgehog/DD-peptidase0Direct
PAH2 domain0Direct
F1F0 ATP synthase subunit C0Direct
BSD domain-like0Direct
Amidase signature (AS) enzymes0Direct
Alanine racemase C-terminal domain-like0Direct
Aminomethyltransferase beta-barrel domain0Direct
Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
MAPEG domain-like0Direct
Glutamine synthetase/guanido kinase0Direct
TK C-terminal domain-like0Direct
Apolipoprotein A-I0Direct
Surp module (SWAP domain)0Direct
PLP-binding barrel0Direct
Succinyl-CoA synthetase domains0Direct
Guanido kinase N-terminal domain0Direct
Fibrinogen coiled-coil and central regions0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
NAD(P)-binding Rossmann-fold domains0.00118Inherited
ALDH-like0.001299Inherited
PLP-dependent transferases0.005805Inherited
RNA-binding domain, RBD0.01662Inherited
Trypsin-like serine proteases0.01786Inherited
Thiamin diphosphate-binding fold (THDP-binding)0.0296Inherited
Translation proteins SH3-like domain0.04285Inherited
Translational machinery components0.06152Inherited
Leukotriene A4 hydrolase N-terminal domain0.06165Inherited
Orange domain-like0.08836Inherited
SMAD MH1 domain0.1254Inherited
SMAD/FHA domain0.1276Inherited
WD40 repeat-like0.1289Inherited
Actin-like ATPase domain0.1623Inherited
Alpha-macroglobulin receptor domain0.1754Inherited
MHC antigen-recognition domain0.2441Inherited
Zn-binding ribosomal proteins0.2734Inherited
HMG-box0.2893Inherited
EGF/Laminin0.4365Inherited
"Winged helix" DNA-binding domain0.4397Inherited
p53-like transcription factors0.7108Inherited
Troponin coil-coiled subunits0.7394Inherited
Snake toxin-like0.7906Inherited
Frizzled cysteine-rich domain0.978Inherited
Growth factor receptor domain0.9877Inherited
EF-hand0.9987Inherited
HLH, helix-loop-helix DNA-binding domain1Inherited
Cystine-knot cytokines1Inherited
Homeodomain-like1Inherited
Tropomyosin1Inherited
Immunoglobulin1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
81995,81811
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct
    57630,57196
  • 57630 - GLA-domain
  • 57196 - EGF/Laminin
  • 0Direct
    57196,50494
  • 57196 - EGF/Laminin
  • 50494 - Trypsin-like serine proteases
  • 0Direct
    103025,101790
  • 103025 - Folate-binding domain
  • 101790 - Aminomethyltransferase beta-barrel domain
  • 0Direct
    82895,57424
  • 82895 - TSP-1 type 1 repeat
  • 57424 - LDL receptor-like module
  • 0Direct
    57424,57184
  • 57424 - LDL receptor-like module
  • 57184 - Growth factor receptor domain
  • 0Direct
    56059,52210
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 52210 - Succinyl-CoA synthetase domains
  • 0Direct
    57924,57924
  • 57924 - Inhibitor of apoptosis (IAP) repeat
  • 57924 - Inhibitor of apoptosis (IAP) repeat
  • 0Direct
    54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0Direct
    55486,48371
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 48371 - ARM repeat
  • 0Direct
    47095,47095
  • 47095 - HMG-box
  • 47095 - HMG-box
  • 0Direct
    57184,49899
  • 57184 - Growth factor receptor domain
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    52518,52922
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52922 - TK C-terminal domain-like
  • 0Direct
    57603,57440
  • 57603 - FnI-like domain
  • 57440 - Kringle-like
  • 0Direct
    54236,50729
  • 54236 - Ubiquitin-like
  • 50729 - PH domain-like
  • 0Direct
    49899,52540
  • 49899 - Concanavalin A-like lectins/glucanases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    53850,53850
  • 53850 - Periplasmic binding protein-like II
  • 53850 - Periplasmic binding protein-like II
  • 0Direct
    81271,55186
  • 81271 - TGS-like
  • 55186 - ThrRS/AlaRS common domain
  • 0Direct
    54534,47473
  • 54534 - FKBP-like
  • 47473 - EF-hand
  • 0Direct
    56968,48431
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    55550,50729
  • 55550 - SH2 domain
  • 50729 - PH domain-like
  • 0Direct
    51230,47005
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 0Direct
    51419,50621
  • 51419 - PLP-binding barrel
  • 50621 - Alanine racemase C-terminal domain-like
  • 0Direct
    47005,52777
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    54160,57850
  • 54160 - Chromo domain-like
  • 57850 - RING/U-box
  • 0Direct
    54403,54403
  • 54403 - Cystatin/monellin
  • 54403 - Cystatin/monellin
  • 0Direct
    53300,81995
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 0Direct
    48034,55931
  • 48034 - Guanido kinase N-terminal domain
  • 55931 - Glutamine synthetase/guanido kinase
  • 0Direct
    50494,50494
  • 50494 - Trypsin-like serine proteases
  • 50494 - Trypsin-like serine proteases
  • 0Direct
    53901,53901
  • 53901 - Thiolase-like
  • 53901 - Thiolase-like
  • 0Direct
    50729,55550
  • 50729 - PH domain-like
  • 55550 - SH2 domain
  • 0Direct
    48371,46785
  • 48371 - ARM repeat
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.0002599Direct
    63737,55486
  • 63737 - Leukotriene A4 hydrolase N-terminal domain
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.06165Inherited
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.08836Inherited
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.1151Inherited
    54791,54791
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 0.1452Inherited
    103657,50729
  • 103657 - BAR/IMD domain-like
  • 50729 - PH domain-like
  • 0.1964Inherited
    52518,52518
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 0.2441Inherited
    57196,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.3352Inherited
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.3864Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.4437Inherited
    57184,57184
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.8421Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52058,52058,52058
  • 52058 - L domain-like
  • 52058 - L domain-like
  • 52058 - L domain-like
  • 0Direct
    57630,57196,57196
  • 57630 - GLA-domain
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0Direct
    63737,55486,48371
  • 63737 - Leukotriene A4 hydrolase N-terminal domain
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 48371 - ARM repeat
  • 0Direct
    57424,57184,63825
  • 57424 - LDL receptor-like module
  • 57184 - Growth factor receptor domain
  • 63825 - YWTD domain
  • 0Direct
    56436,56436,56436
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0Direct
    81995,81811,82754
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0Direct
    55550,56112,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    54791,54791,54791
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 0Direct
    57424,57424,57184
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57184 - Growth factor receptor domain
  • 0Direct
    50729,55550,56112
  • 50729 - PH domain-like
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    53300,81995,81811
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct
    57196,49854,57535
  • 57196 - EGF/Laminin
  • 49854 - Spermadhesin, CUB domain
  • 57535 - Complement control module/SCR domain
  • 0Direct
    51230,47005,52777
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    50249,50249,50249
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0Direct
    54160,57850,57845
  • 54160 - Chromo domain-like
  • 57850 - RING/U-box
  • 57845 - B-box zinc-binding domain
  • 0Direct
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0Direct
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.2282Inherited
    57196,57184,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.2441Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.5403Inherited
    57184,57196,57196
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.9657Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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