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Xenopus ANatomical entity (XAN): egg

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + 4:   whole organism [XAO:0003004] <12>(448|575) (454|327|143)
+ + + + 4:   anatomical structure [XAO:0003000] <11>(574|728) (574|396|161)
+ + + 3:   cell [XAO:0003012] <70>(92|102) (94|35|16)
+ + 2:   germ cell [XAO:0000111] <9>(55|62) (57|22|10)
+ 1:   gamete [XAO:0003150] <2>(38|47) (39|14|5)
0:   egg [XAO:0003048](38|47) (39|14|5)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
DLC0Direct
Mediator hinge subcomplex-like0Direct
TK C-terminal domain-like0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Translational machinery components0Direct
Alanine racemase C-terminal domain-like0Direct
Zn-finger domain of Sec23/240Direct
PAH2 domain0Direct
LuxS/MPP-like metallohydrolase0Direct
Nop domain0Direct
Transcription factor IIA (TFIIA), beta-barrel domain0Direct
USP8 N-terminal domain-like0Direct
Surp module (SWAP domain)0Direct
RBP11-like subunits of RNA polymerase0Direct
Nucleoporin domain0Direct
LysM domain0Direct
Restriction endonuclease-like0Direct
Nucleoplasmin-like core domain0Direct
Myosin phosphatase inhibitor 17kDa protein, CPI-170Direct
SIS domain0Direct
Transcription factor IIA (TFIIA), alpha-helical domain0Direct
Cysteine alpha-hairpin motif0Direct
FAD-dependent thiol oxidase0Direct
PABC (PABP) domain0Direct
Tim10-like0Direct
PLP-binding barrel0Direct
The spindle assembly checkpoint protein mad20Direct
LexA/Signal peptidase0Direct
Ribosomal protein L10-like0Direct
PriA/YqbF domain0Direct
BSD domain-like0Direct
GINS helical bundle-like0Direct
RNA-binding domain, RBD0.0000000000000219Direct
Nucleic acid-binding proteins0.000003347Direct
Sm-like ribonucleoproteins0.000004086Direct
ARM repeat0.0001057Direct
UBC-like0.0001481Direct
S-adenosyl-L-methionine-dependent methyltransferases0.0002187Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
A20-like zinc finger0Direct
Steroid-binding domain0Direct
Translation initiation factor eIF4e0Direct
CAT-like0Direct
Zn-finger domain of Sec23/240Direct
Protein prenyltransferases0Direct
PABC (PABP) domain0Direct
PAH2 domain0Direct
TATA-box binding protein (TBP), C-terminal domain0Direct
Myosin phosphatase inhibitor 17kDa protein, CPI-170Direct
Pseudouridine synthase I TruA0Direct
DLC0Direct
Transcription factor IIA (TFIIA), beta-barrel domain0Direct
NTF2-like0Direct
E2F dimerization segment0Direct
S-adenosylhomocystein hydrolase0Direct
Nucleoplasmin-like core domain0Direct
Ubiquitin carboxyl-terminal hydrolase UCH-L0Direct
BSD domain0Direct
Alanine racemase-like, N-terminal domain0Direct
Eukaryotic ODC-like0Direct
Surp module (SWAP domain)0Direct
Tim10/DDP0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Nop domain0Direct
Ran-binding domain0Direct
Clathrin adaptor appendage, alpha and beta chain-specific domain0Direct
FAD-dependent thiol oxidase0Direct
Transcription factor IIA (TFIIA), alpha-helical domain0Direct
Variant RING domain0Direct
USP8 N-terminal domain-like0Direct
MPP-like0Direct
Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain0Direct
Ribosomal protein L18 and S110Direct
TRASH domain0Direct
Sedlin (SEDL)0Direct
LysM domain0Direct
Alpha-adaptin ear subdomain-like0Direct
XPF/Rad1/Mus81 nuclease0Direct
Canonical RBD0.00000000000007388Direct
UBC-related0.0000007079Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.000007302Direct
Protein serine/threonine phosphatase0.0001011Direct
Cyclin0.0001324Direct
WD40-repeat0.0001506Direct
Cold shock DNA-binding domain-like0.0001802Direct
Tudor domain0.0007721Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nop domain0Direct
TK C-terminal domain-like0Direct
BSD domain-like0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Myosin phosphatase inhibitor 17kDa protein, CPI-170Direct
DLC0Direct
GINS helical bundle-like0Direct
PLP-binding barrel0Direct
PriA/YqbF domain0Direct
Surp module (SWAP domain)0Direct
Ribosomal protein L10-like0Direct
Translational machinery components0Direct
Transcription factor IIA (TFIIA), beta-barrel domain0Direct
Cysteine alpha-hairpin motif0Direct
Zn-finger domain of Sec23/240Direct
PABC (PABP) domain0Direct
USP8 N-terminal domain-like0Direct
LysM domain0Direct
Nucleoplasmin-like core domain0Direct
Alanine racemase C-terminal domain-like0Direct
LexA/Signal peptidase0Direct
Transcription factor IIA (TFIIA), alpha-helical domain0Direct
PAH2 domain0Direct
Mediator hinge subcomplex-like0Direct
Restriction endonuclease-like0Direct
Nucleoporin domain0Direct
The spindle assembly checkpoint protein mad20Direct
FAD-dependent thiol oxidase0Direct
RBP11-like subunits of RNA polymerase0Direct
SIS domain0Direct
Tim10-like0Direct
LuxS/MPP-like metallohydrolase0Direct
RNA-binding domain, RBD0.00000000000001505Direct
Nucleic acid-binding proteins0.000002379Direct
Sm-like ribonucleoproteins0.000002906Direct
ARM repeat0.00007762Direct
UBC-like0.0001091Direct
S-adenosyl-L-methionine-dependent methyltransferases0.0001619Direct
Metallo-dependent phosphatases0.0007704Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55945,55945
  • 55945 - TATA-box binding protein-like
  • 55945 - TATA-box binding protein-like
  • 0Direct
    51206,51206
  • 51206 - cAMP-binding domain-like
  • 51206 - cAMP-binding domain-like
  • 0Direct
    47005,52777
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    51419,50621
  • 51419 - PLP-binding barrel
  • 50621 - Alanine racemase C-terminal domain-like
  • 0Direct
    63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0Direct
    48371,46785
  • 48371 - ARM repeat
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    54236,57889
  • 54236 - Ubiquitin-like
  • 57889 - Cysteine-rich domain
  • 0Direct
    52540,46785
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    47095,47095
  • 47095 - HMG-box
  • 47095 - HMG-box
  • 0Direct
    82919,53300
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 0Direct
    51230,47005
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 0Direct
    52518,52922
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52922 - TK C-terminal domain-like
  • 0Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.000001227Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.000001711Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    90229,90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0Direct
    50249,50249,50249
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    54768,54768,54768
  • 54768 - dsRNA-binding domain-like
  • 54768 - dsRNA-binding domain-like
  • 54768 - dsRNA-binding domain-like
  • 0Direct
    54791,54791,54791
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 0Direct
    51230,47005,52777
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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