SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Xenopus ANatomical entity (XAN): splanchnocranium

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + 4:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ + + + 4:   multicellular anatomical structure [XAO:0005002] <4>(436|565) (440|325|142)
+ + + + 4:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + + + 4:   anatomical region [XAO:0003186] <51>(370|484) (374|284|123)
+ + + 3:   anatomical system [XAO:0003002] <19>(283|382) (289|204|93)
+ + + 3:   anatomical group [XAO:0003001] <2>(414|530) (418|309|134)
+ + + 3:   head region [XAO:0000040] <4>(178|245) (183|137|58)
+ + + 3:   musculoskeletal system [XAO:0000168] <2>(44|60) (47|28|16)
+ + + 3:   organism subdivision [XAO:0003013] <11>(375|498) (381|292|126)
+ + 2:   skeletal system [XAO:0003060] <3>(17|17) (17|7|4)
+ + 2:   head [XAO:0003024] <22>(178|244) (183|137|58)
+ + 2:   anatomical cluster [XAO:0003160] <43>(92|141) (95|75|38)
+ 1:   cranium [XAO:0003075] <14>(5|9) (5|3|1)
0:   splanchnocranium [XAO:0003176] <5>(3|6) (3|0|0)
- 1:   branchial arch skeleton [XAO:0003180] <4>(1|1) (1|0|0)
- 1:   hyoid arch skeleton [XAO:0003177] <2>(0|0) (0|0|0)
- 1:   mandibular arch [XAO:0000097] <2>(1|2) (1|0|0)
- 1:   mandibular arch skeleton [XAO:0005162](0|0) (0|0|0)
- 1:   suspensorium [XAO:0003086](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Cytokine0.00005844Direct
HMG-box0.0007448Direct
p53-like transcription factors0.3913Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
RUNT domain0Direct
Glutathione peroxidase-like0.00001302Direct
Fibroblast growth factors (FGF)0.00003873Direct
Extracellular domain of cell surface receptors0.0001499Direct
HMG-box0.0008625Direct
Homeodomain0.8974Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Cytokine0.00004286Direct
HMG-box0.000563Direct
p53-like transcription factors0.3601Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)