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Xenopus ANatomical entity (XAN): sensory system

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   anatomical structure [XAO:0003000] <11>(574|728) (574|397|161)
+ + + 3:   whole organism [XAO:0003004] <12>(470|603) (471|338|143)
+ + 2:   anatomical group [XAO:0003001] <2>(425|538) (427|311|132)
+ 1:   anatomical system [XAO:0003002] <19>(300|393) (304|210|91)
+ 1:   nervous system [XAO:0000177] <10>(135|202) (140|114|51)
0:   sensory system [XAO:0003194] <5>(40|53) (46|27|13)
- 1:   olfactory system [XAO:0003196] <10>(4|5) (5|1|0)
- 1:   visual system [XAO:0003198] <5>(27|36) (32|16|8)
- 1:   gustatory system [XAO:0003197] <4>(6|4) (6|1|0)
- 1:   lateral line system [XAO:0000095] <4>(1|1) (1|0|0)
- 1:   vestibuloauditory system [XAO:0003195] <4>(18|23) (18|9|7)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Nop domain0Direct
Synuclein0Direct
Guanido kinase N-terminal domain0Direct
Hedgehog/DD-peptidase0Direct
PLP-binding barrel0Direct
Homeodomain-like0Direct
14-3-3 protein0Direct
Cytokine0Direct
Alanine racemase C-terminal domain-like0Direct
GINS helical bundle-like0Direct
PriA/YqbF domain0Direct
HLH, helix-loop-helix DNA-binding domain7.346e-16Direct
"Winged helix" DNA-binding domain0.0000000008431Direct
Frizzled cysteine-rich domain0.0000001689Direct
RNA-binding domain, RBD0.00002088Direct
Transducin (alpha subunit), insertion domain0.00006013Direct
Sema domain0.0001059Direct
HMG-box0.000109Direct
Plexin repeat0.0002539Direct
p53-like transcription factors0.0003145Direct
Zn-binding ribosomal proteins0.000323Direct
SMAD MH1 domain0.000323Direct
Orange domain-like0.00055Direct
PYP-like sensor domain (PAS domain)0.0007134Direct
BRK domain-like0.004506Inherited
Growth factor receptor domain0.005711Inherited
Cadherin-like0.01048Inherited
Tubulin C-terminal domain-like0.02096Inherited
gamma-Crystallin-like0.02108Inherited
Tubulin nucleotide-binding domain-like0.03238Inherited
Intermediate filament protein, coiled coil region0.04279Inherited
lambda repressor-like DNA-binding domains0.06453Inherited
DNA-binding domain0.1915Inherited
Fibronectin type III0.311Inherited
Voltage-gated potassium channels0.3406Inherited
Second domain of FERM0.3949Inherited
Galactose-binding domain-like0.487Inherited
Spectrin repeat0.7591Inherited
POZ domain0.9865Inherited
Family A G protein-coupled receptor-like1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0Direct
Alanine racemase-like, N-terminal domain0Direct
Fibroblast growth factors (FGF)0Direct
Noggin0Direct
Guanido kinase N-terminal domain0Direct
Nop domain0Direct
Eukaryotic ODC-like0Direct
PAS domain of steroid receptor coactivator 1A, NCo-A10Direct
Arrestin/Vps26-like0Direct
Hedgehog (development protein), N-terminal signaling domain0Direct
Synuclein0Direct
14-3-3 protein0Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain0Direct
Guanido kinase catalytic domain0Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain0Direct
HLH, helix-loop-helix DNA-binding domain0.000000000000007479Direct
Frizzled cysteine-rich domain0.0000002833Direct
Forkhead DNA-binding domain0.0000003964Direct
ets domain0.000009249Direct
Sema domain0.00001067Direct
Transducin (alpha subunit), insertion domain0.00007642Direct
SMAD domain0.00009434Direct
Canonical RBD0.00009703Direct
T-box0.0001507Direct
Growth factor receptor domain0.0001915Direct
HMG-box0.0001968Direct
SMAD MH1 domain0.0003495Direct
Plexin repeat0.0003951Direct
Hairy Orange domain0.0006188Direct
P4 origin-binding domain-like0.001273Inherited
L domain0.001273Inherited
Extracellular domain of cell surface receptors0.001273Inherited
BRK domain-like0.004527Inherited
Transforming growth factor (TGF)-beta0.00856Inherited
LIM domain0.01005Inherited
Hypoxia-inducible factor Hif2a, C-terminal domain0.01285Inherited
POU-specific domain0.01717Inherited
I set domains0.02069Inherited
Crystallins/Ca-binding development proteins0.02246Inherited
Tubulin, C-terminal domain0.02419Inherited
Tubulin, GTPase domain0.02419Inherited
Glutathione peroxidase-like0.03952Inherited
Intermediate filament protein, coiled coil region0.05362Inherited
Ephrin ectodomain0.09286Inherited
Arginine methyltransferase0.1092Inherited
Tandem AAA-ATPase domain0.1534Inherited
Higher-molecular-weight phosphotyrosine protein phosphatases0.2372Inherited
Fibronectin type III0.3803Inherited
Tetramerization domain of potassium channels0.5764Inherited
Voltage-gated potassium channels0.5784Inherited
G proteins0.6428Inherited
Spectrin repeat0.8239Inherited
Rhodopsin-like1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0Direct
Synuclein0Direct
PriA/YqbF domain0Direct
GINS helical bundle-like0Direct
Hedgehog/DD-peptidase0Direct
Cytokine0Direct
PLP-binding barrel0Direct
Alanine racemase C-terminal domain-like0Direct
Nop domain0Direct
Guanido kinase N-terminal domain0Direct
14-3-3 protein0Direct
HLH, helix-loop-helix DNA-binding domain5.145e-16Direct
"Winged helix" DNA-binding domain0.000000000596Direct
Frizzled cysteine-rich domain0.0000001206Direct
RNA-binding domain, RBD0.00001536Direct
Transducin (alpha subunit), insertion domain0.00004466Direct
Sema domain0.00007911Direct
HMG-box0.00008142Direct
Plexin repeat0.0001916Direct
p53-like transcription factors0.000238Direct
Zn-binding ribosomal proteins0.0002445Direct
SMAD MH1 domain0.0002445Direct
Orange domain-like0.0004191Direct
PYP-like sensor domain (PAS domain)0.0005454Direct
BRK domain-like0.003528Inherited
Glutamine synthetase/guanido kinase0.003528Inherited
Growth factor receptor domain0.00449Inherited
Cadherin-like0.008325Inherited
Tubulin C-terminal domain-like0.01689Inherited
gamma-Crystallin-like0.01699Inherited
Tubulin nucleotide-binding domain-like0.02639Inherited
Intermediate filament protein, coiled coil region0.03514Inherited
F-box domain0.05221Inherited
lambda repressor-like DNA-binding domains0.05397Inherited
DNA-binding domain0.1696Inherited
Fibronectin type III0.2834Inherited
Eukaryotic type KH-domain (KH-domain type I)0.2854Inherited
Voltage-gated potassium channels0.3118Inherited
Cupredoxins0.3446Inherited
Second domain of FERM0.3646Inherited
Galactose-binding domain-like0.4539Inherited
Spectrin repeat0.7245Inherited
E set domains0.847Inherited
POZ domain0.9607Inherited
P-loop containing nucleoside triphosphate hydrolases1Inherited
Family A G protein-coupled receptor-like1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
56436,57535
  • 56436 - C-type lectin-like
  • 57535 - Complement control module/SCR domain
  • 0Direct
    52540,53254
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 53254 - Phosphoglycerate mutase-like
  • 0Direct
    57184,49265
  • 57184 - Growth factor receptor domain
  • 49265 - Fibronectin type III
  • 0Direct
    48726,56436
  • 48726 - Immunoglobulin
  • 56436 - C-type lectin-like
  • 0Direct
    48034,55931
  • 48034 - Guanido kinase N-terminal domain
  • 55931 - Glutamine synthetase/guanido kinase
  • 0Direct
    51419,50621
  • 51419 - PLP-binding barrel
  • 50621 - Alanine racemase C-terminal domain-like
  • 0Direct
    50044,50156
  • 50044 - SH3-domain
  • 50156 - PDZ domain-like
  • 0Direct
    49899,48726
  • 49899 - Concanavalin A-like lectins/glucanases
  • 48726 - Immunoglobulin
  • 0Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00004466Direct
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.00006076Direct
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.00007911Direct
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.0004191Direct
    57184,52058
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.000943Direct
    52058,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.000943Direct
    47459,55785
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.001281Inherited
    55785,55785
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.00156Inherited
    52799,52799
  • 52799 - (Phosphotyrosine protein) phosphatases II
  • 52799 - (Phosphotyrosine protein) phosphatases II
  • 0.006457Inherited
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.01689Inherited
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.03511Inherited
    54160,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.03712Inherited
    57850,49599
  • 57850 - RING/U-box
  • 49599 - TRAF domain-like
  • 0.03712Inherited
    49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.1081Inherited
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.1266Inherited
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.2392Inherited
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.3016Inherited
    46689,46689
  • 46689 - Homeodomain-like
  • 46689 - Homeodomain-like
  • 0.3777Inherited
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.6774Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    49899,48726,49265
  • 49899 - Concanavalin A-like lectins/glucanases
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0Direct
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0Direct
    48726,56436,56436
  • 48726 - Immunoglobulin
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0Direct
    50044,55550,56112
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.0001188Direct
    47459,55785,55785
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.0004191Direct
    52058,57184,52058
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.003528Inherited
    49899,57196,57196
  • 49899 - Concanavalin A-like lectins/glucanases
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.01494Inherited
    48726,49265,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.02974Inherited
    54160,52540,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.03712Inherited
    54160,54160,52540
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.03712Inherited
    57196,57196,49899
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.04409Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.07035Inherited
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.3621Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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