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Xenopus ANatomical entity (XAN): sensory system

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   anatomical structure [XAO:0003000] <11>(574|729) (574|397|164)
+ + + 3:   whole organism [XAO:0003004] <12>(471|606) (473|338|146)
+ + 2:   anatomical group [XAO:0003001] <2>(425|543) (426|312|134)
+ 1:   nervous system [XAO:0000177] <10>(135|201) (138|112|53)
+ 1:   anatomical system [XAO:0003002] <19>(301|396) (304|208|92)
0:   sensory system [XAO:0003194] <5>(40|54) (44|29|13)
- 1:   olfactory system [XAO:0003196] <10>(3|4) (4|1|0)
- 1:   visual system [XAO:0003198] <5>(27|34) (29|16|8)
- 1:   gustatory system [XAO:0003197] <4>(6|6) (6|2|0)
- 1:   lateral line system [XAO:0000095] <4>(1|1) (1|0|0)
- 1:   vestibuloauditory system [XAO:0003195] <4>(16|22) (17|10|7)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Guanido kinase N-terminal domain0Direct
PLP-binding barrel0Direct
Hedgehog/DD-peptidase0Direct
Homeodomain-like0Direct
PriA/YqbF domain0Direct
14-3-3 protein0Direct
Synuclein0Direct
Cytokine0Direct
Zn-binding ribosomal proteins0Direct
HLH, helix-loop-helix DNA-binding domain0Direct
Nop domain0Direct
Alanine racemase C-terminal domain-like0Direct
"Winged helix" DNA-binding domain0.000000009892Direct
Frizzled cysteine-rich domain0.000001762Direct
Transducin (alpha subunit), insertion domain0.00005211Direct
RNA-binding domain, RBD0.00005329Direct
HMG-box0.00008569Direct
Sema domain0.00008799Direct
Plexin repeat0.0002083Direct
p53-like transcription factors0.0002555Direct
SMAD MH1 domain0.0002938Direct
Orange domain-like0.0004984Direct
PYP-like sensor domain (PAS domain)0.0006111Direct
BRK domain-like0.004238Inherited
Growth factor receptor domain0.004506Inherited
Intermediate filament protein, coiled coil region0.03854Inherited
F-box domain0.05603Inherited
lambda repressor-like DNA-binding domains0.06024Inherited
gamma-Crystallin-like0.07749Inherited
Tubulin C-terminal domain-like0.08116Inherited
Tubulin nucleotide-binding domain-like0.1079Inherited
DNA-binding domain0.1837Inherited
Voltage-gated potassium channels0.317Inherited
Cupredoxins0.365Inherited
Second domain of FERM0.3764Inherited
Galactose-binding domain-like0.4609Inherited
Spectrin repeat0.7454Inherited
E set domains0.8539Inherited
POZ domain1Inherited
Family A G protein-coupled receptor-like1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain0Direct
Alanine racemase-like, N-terminal domain0Direct
Arrestin/Vps26-like0Direct
Guanido kinase N-terminal domain0Direct
Hedgehog (development protein), N-terminal signaling domain0Direct
Synuclein0Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain0Direct
14-3-3 protein0Direct
Eukaryotic ODC-like0Direct
Homeodomain0Direct
Nop domain0Direct
PAS domain of steroid receptor coactivator 1A, NCo-A10Direct
Fibroblast growth factors (FGF)0Direct
Noggin0Direct
Guanido kinase catalytic domain0Direct
HLH, helix-loop-helix DNA-binding domain0.000000000000003189Direct
Forkhead DNA-binding domain0.0000002748Direct
Frizzled cysteine-rich domain0.00000266Direct
Sema domain0.000008368Direct
Transducin (alpha subunit), insertion domain0.00006434Direct
ets domain0.00007453Direct
SMAD domain0.00008262Direct
Canonical RBD0.0001209Direct
T-box0.0001275Direct
Growth factor receptor domain0.0001417Direct
HMG-box0.0001481Direct
SMAD MH1 domain0.0003109Direct
Plexin repeat0.0003124Direct
Hairy Orange domain0.0005456Direct
Extracellular domain of cell surface receptors0.001157Inherited
L domain0.001157Inherited
P4 origin-binding domain-like0.001157Inherited
BRK domain-like0.004181Inherited
Transforming growth factor (TGF)-beta0.007273Inherited
LIM domain0.00851Inherited
Hypoxia-inducible factor Hif2a, C-terminal domain0.01157Inherited
POU-specific domain0.01552Inherited
I set domains0.01674Inherited
Glutathione peroxidase-like0.03632Inherited
Intermediate filament protein, coiled coil region0.04685Inherited
F-box domain0.06995Inherited
Crystallins/Ca-binding development proteins0.07986Inherited
Ephrin ectodomain0.08825Inherited
Tubulin, GTPase domain0.08863Inherited
Tubulin, C-terminal domain0.08863Inherited
Tandem AAA-ATPase domain0.1337Inherited
Higher-molecular-weight phosphotyrosine protein phosphatases0.1495Inherited
Third domain of FERM0.2216Inherited
Second domain of FERM0.4813Inherited
Voltage-gated potassium channels0.5511Inherited
Tetramerization domain of potassium channels0.5564Inherited
G proteins0.5855Inherited
Spectrin repeat0.8099Inherited
Rhodopsin-like1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Synuclein0Direct
14-3-3 protein0Direct
PriA/YqbF domain0Direct
PLP-binding barrel0Direct
Nop domain0Direct
Guanido kinase N-terminal domain0Direct
Zn-binding ribosomal proteins0Direct
Alanine racemase C-terminal domain-like0Direct
Cytokine0Direct
HLH, helix-loop-helix DNA-binding domain0Direct
Hedgehog/DD-peptidase0Direct
Homeodomain-like0Direct
"Winged helix" DNA-binding domain0.000000006982Direct
Frizzled cysteine-rich domain0.000001262Direct
Transducin (alpha subunit), insertion domain0.00003834Direct
RNA-binding domain, RBD0.00003923Direct
HMG-box0.00006336Direct
Sema domain0.00006506Direct
Plexin repeat0.0001558Direct
p53-like transcription factors0.0001917Direct
SMAD MH1 domain0.0002207Direct
Orange domain-like0.0003759Direct
PYP-like sensor domain (PAS domain)0.0004621Direct
BRK domain-like0.003289Inherited
Growth factor receptor domain0.003501Inherited
Cystine-knot cytokines0.01454Inherited
Intermediate filament protein, coiled coil region0.03128Inherited
F-box domain0.04623Inherited
lambda repressor-like DNA-binding domains0.04984Inherited
gamma-Crystallin-like0.06491Inherited
Tubulin C-terminal domain-like0.06812Inherited
Tubulin nucleotide-binding domain-like0.09201Inherited
DNA-binding domain0.1618Inherited
Fibronectin type III0.2549Inherited
Eukaryotic type KH-domain (KH-domain type I)0.2689Inherited
Voltage-gated potassium channels0.2883Inherited
Cupredoxins0.3353Inherited
Second domain of FERM0.3461Inherited
Galactose-binding domain-like0.4279Inherited
Spectrin repeat0.7112Inherited
E set domains0.825Inherited
POZ domain1Inherited
Family A G protein-coupled receptor-like1Inherited
P-loop containing nucleoside triphosphate hydrolases1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52540,53254
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 53254 - Phosphoglycerate mutase-like
  • 0Direct
    56436,57535
  • 56436 - C-type lectin-like
  • 57535 - Complement control module/SCR domain
  • 0Direct
    50044,50156
  • 50044 - SH3-domain
  • 50156 - PDZ domain-like
  • 0Direct
    49899,48726
  • 49899 - Concanavalin A-like lectins/glucanases
  • 48726 - Immunoglobulin
  • 0Direct
    48726,56436
  • 48726 - Immunoglobulin
  • 56436 - C-type lectin-like
  • 0Direct
    51419,50621
  • 51419 - PLP-binding barrel
  • 50621 - Alanine racemase C-terminal domain-like
  • 0Direct
    57184,49265
  • 57184 - Growth factor receptor domain
  • 49265 - Fibronectin type III
  • 0Direct
    48034,55931
  • 48034 - Guanido kinase N-terminal domain
  • 55931 - Glutamine synthetase/guanido kinase
  • 0Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00003834Direct
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.00004673Direct
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.00006506Direct
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.0003759Direct
    57184,52058
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.0008663Direct
    52058,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.0008663Direct
    47459,55785
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.00113Inherited
    55785,55785
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.001404Inherited
    52799,52799
  • 52799 - (Phosphotyrosine protein) phosphatases II
  • 52799 - (Phosphotyrosine protein) phosphatases II
  • 0.005883Inherited
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.03251Inherited
    54160,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.03511Inherited
    57850,49599
  • 57850 - RING/U-box
  • 49599 - TRAF domain-like
  • 0.03511Inherited
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0.05039Inherited
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.06812Inherited
    49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.09844Inherited
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.117Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.1412Inherited
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.2794Inherited
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.3296Inherited
    46689,46689
  • 46689 - Homeodomain-like
  • 46689 - Homeodomain-like
  • 0.3675Inherited
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.6622Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    49899,48726,49265
  • 49899 - Concanavalin A-like lectins/glucanases
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0Direct
    48726,56436,56436
  • 48726 - Immunoglobulin
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0Direct
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0Direct
    50044,55550,56112
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.0001047Direct
    47459,55785,55785
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.0003759Direct
    52058,57184,52058
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.003289Inherited
    49899,57196,57196
  • 49899 - Concanavalin A-like lectins/glucanases
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.01404Inherited
    48726,49265,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.028Inherited
    54160,52540,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.03511Inherited
    54160,54160,52540
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.03511Inherited
    57196,57196,49899
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.04201Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.06537Inherited
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.3502Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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