SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Xenopus ANatomical entity (XAN): trunk musculature

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   whole organism [XAO:0003004] <12>(448|575) (454|327|143)
+ + + 3:   anatomical structure [XAO:0003000] <11>(574|728) (574|396|161)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(435|562) (438|323|141)
+ + + 3:   anatomical region [XAO:0003186] <43>(371|485) (375|286|122)
+ + 2:   anatomical group [XAO:0003001] <2>(372|480) (379|295|130)
+ + 2:   trunk region [XAO:0000054] <1>(215|301) (217|157|81)
+ + 2:   organism subdivision [XAO:0003013] <11>(375|497) (382|292|125)
+ 1:   anatomical cluster [XAO:0003160] <43>(95|144) (99|77|38)
+ 1:   trunk [XAO:0003025] <10>(214|300) (216|157|81)
0:   trunk musculature [XAO:0003230] <2>(3|5) (3|2|1)
- 1:   epaxial muscle [XAO:0003229](1|2) (1|0|0)
- 1:   hypaxial muscle [XAO:0003228](2|2) (2|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
SRF-like0.000001597Direct
HLH, helix-loop-helix DNA-binding domain0.00002172Direct
PYP-like sensor domain (PAS domain)0.00003023Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
SRF-like0.000001442Direct
Parvalbumin0.000008646Direct
Hypoxia-inducible factor Hif2a, C-terminal domain0.00001346Direct
HLH, helix-loop-helix DNA-binding domain0.00002498Direct
28-residue LRR0.0003776Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SRF-like0.00000113Direct
HLH, helix-loop-helix DNA-binding domain0.0000157Direct
PYP-like sensor domain (PAS domain)0.00002192Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55785,55785
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.0001995Direct
    47459,55785
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.0006236Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    47459,55785,55785
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.000123Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)