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Xenopus ANatomical entity (XAN): muscular system

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   whole organism [XAO:0003004] <12>(448|575) (454|327|143)
+ + + 3:   anatomical structure [XAO:0003000] <11>(574|728) (574|396|161)
+ + 2:   anatomical group [XAO:0003001] <2>(372|480) (379|295|130)
+ 1:   anatomical system [XAO:0003002] <19>(237|329) (246|189|86)
+ 1:   musculoskeletal system [XAO:0000168] <2>(44|60) (46|26|15)
0:   muscular system [XAO:0004042] <4>(28|41) (30|17|8)
- 1:   cranial muscle primordium [XAO:0004455] <29>(1|1) (1|0|0)
- 1:   muscle [XAO:0000172] <10>(20|27) (22|11|4)
- 1:   somite [XAO:0000058] <5>(10|10) (10|4|2)
- 1:   presomitic mesoderm [XAO:0000057] <2>(5|10) (5|3|2)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Mitochondrial cytochrome c oxidase subunit VIIa0Direct
HSP90 C-terminal domain0Direct
SRF-like0Direct
HLH, helix-loop-helix DNA-binding domain0.000000276Direct
GroEL equatorial domain-like0.00002059Direct
RNA-binding domain, RBD0.00002916Direct
Orange domain-like0.00004085Direct
GroEL-intermediate domain like0.00004085Direct
Translation proteins SH3-like domain0.00004254Direct
GroEL apical domain-like0.0001523Direct
Acyl-CoA dehydrogenase C-terminal domain-like0.0001981Direct
Acyl-CoA dehydrogenase NM domain-like0.0001981Direct
Zn-binding ribosomal proteins0.0005357Direct
HSP20-like chaperones0.001892Inherited
Actin-like ATPase domain0.006341Inherited
Cytokine0.006467Inherited
Frizzled cysteine-rich domain0.007978Inherited
Heat shock protein 70kD (HSP70), peptide-binding domain0.008704Inherited
Thiolase-like0.009367Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.01289Inherited
14-3-3 protein0.02566Inherited
Tropomyosin0.03628Inherited
PYP-like sensor domain (PAS domain)0.0567Inherited
Myosin rod fragments0.06079Inherited
EF-hand0.1991Inherited
Homeodomain-like0.2015Inherited
p53-like transcription factors0.2358Inherited
FnI-like domain0.2876Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Malic enzyme N-domain0Direct
Troponin I0Direct
SRF-like0Direct
Heat shock protein 90, HSP90, N-terminal domain0Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain0Direct
Hsp90 middle domain0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain0Direct
GDI-like N domain0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
HSP90 C-terminal domain0Direct
GABARAP-like0Direct
Mitochondrial cytochrome c oxidase subunit VIIa0Direct
HLH, helix-loop-helix DNA-binding domain0.0000008449Direct
Medium chain acyl-CoA dehydrogenase-like, C-terminal domain0.000001522Direct
Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains0.000001522Direct
Canonical RBD0.000002842Direct
Proteasome subunits0.00002392Direct
Hairy Orange domain0.00004472Direct
Actin/HSP700.00005965Direct
Group II chaperonin (CCT, TRIC), apical domain0.0001565Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.0003204Direct
Parvalbumin0.001873Inherited
Glutathione peroxidase-like0.001975Inherited
Thiolase-related0.003046Inherited
Translational machinery components0.003046Inherited
Heat shock protein 70kD (HSP70), peptide-binding domain0.009103Inherited
Frizzled cysteine-rich domain0.00917Inherited
Tropomyosin0.01279Inherited
Fibroblast growth factors (FGF)0.01614Inherited
Hypoxia-inducible factor Hif2a, C-terminal domain0.01908Inherited
L domain0.02472Inherited
14-3-3 protein0.02472Inherited
T-box0.03733Inherited
Myosin rod fragments0.04421Inherited
28-residue LRR0.07614Inherited
Forkhead DNA-binding domain0.1533Inherited
Erythroid transcription factor GATA-10.173Inherited
Link domain0.2489Inherited
Homeodomain0.333Inherited
Motor proteins0.5393Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SRF-like0Direct
HSP90 C-terminal domain0Direct
Mitochondrial cytochrome c oxidase subunit VIIa0Direct
HLH, helix-loop-helix DNA-binding domain0.0000001938Direct
GroEL equatorial domain-like0.00001487Direct
RNA-binding domain, RBD0.00002113Direct
Orange domain-like0.0000297Direct
GroEL-intermediate domain like0.0000297Direct
Translation proteins SH3-like domain0.00003093Direct
GroEL apical domain-like0.0001123Direct
Acyl-CoA dehydrogenase NM domain-like0.0001466Direct
Acyl-CoA dehydrogenase C-terminal domain-like0.0001466Direct
Zn-binding ribosomal proteins0.0004013Direct
HSP20-like chaperones0.001444Inherited
Actin-like ATPase domain0.004922Inherited
Pentein0.005018Inherited
LDH C-terminal domain-like0.005018Inherited
Cytokine0.005023Inherited
Frizzled cysteine-rich domain0.006212Inherited
Heat shock protein 70kD (HSP70), peptide-binding domain0.006787Inherited
Thiolase-like0.007305Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.01012Inherited
14-3-3 protein0.02044Inherited
Tropomyosin0.02931Inherited
PYP-like sensor domain (PAS domain)0.04669Inherited
Myosin rod fragments0.05016Inherited
EF-hand0.1759Inherited
Homeodomain-like0.1782Inherited
p53-like transcription factors0.2106Inherited
FnI-like domain0.2594Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54631,54631
  • 54631 - CBS-domain pair
  • 54631 - CBS-domain pair
  • 0Direct
    48371,46785
  • 48371 - ARM repeat
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0Direct
    52540,53254
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 53254 - Phosphoglycerate mutase-like
  • 0Direct
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.0000297Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.00003127Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0001095Direct
    56645,47203
  • 56645 - Acyl-CoA dehydrogenase NM domain-like
  • 47203 - Acyl-CoA dehydrogenase C-terminal domain-like
  • 0.0001466Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.001861Inherited
    51735,56327
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 56327 - LDH C-terminal domain-like
  • 0.005018Inherited
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.006787Inherited
    100920,100934
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.007038Inherited
    53901,53901
  • 53901 - Thiolase-like
  • 53901 - Thiolase-like
  • 0.007305Inherited
    52058,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.02044Inherited
    57184,52058
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.02044Inherited
    57184,57184
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.1258Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0Direct
    90257,90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0Direct
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0Direct
    57196,57184,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.005018Inherited
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.006787Inherited
    53067,100920,100934
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.007038Inherited
    48371,48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.0696Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.2083Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)