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Xenopus ANatomical entity (XAN): muscular system

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + + 3:   whole organism [XAO:0003004] <12>(462|598) (466|335|145)
+ + 2:   anatomical group [XAO:0003001] <2>(415|530) (419|309|134)
+ 1:   anatomical system [XAO:0003002] <19>(284|382) (290|204|93)
+ 1:   musculoskeletal system [XAO:0000168] <2>(44|60) (47|28|16)
0:   muscular system [XAO:0004042] <4>(28|40) (31|19|9)
- 1:   cranial muscle primordium [XAO:0004455] <30>(1|1) (1|0|0)
- 1:   muscle [XAO:0000172] <10>(20|26) (23|11|4)
- 1:   somite [XAO:0000058] <5>(8|11) (10|6|3)
- 1:   presomitic mesoderm [XAO:0000057] <2>(5|9) (5|3|2)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
HSP90 C-terminal domain0Direct
SRF-like0Direct
Mitochondrial cytochrome c oxidase subunit VIIa0Direct
HLH, helix-loop-helix DNA-binding domain0.0000002039Direct
RNA-binding domain, RBD0.000007621Direct
GroEL equatorial domain-like0.00002088Direct
GroEL-intermediate domain like0.00003519Direct
Orange domain-like0.00003519Direct
Translation proteins SH3-like domain0.00004317Direct
GroEL apical domain-like0.0001542Direct
Acyl-CoA dehydrogenase C-terminal domain-like0.0002014Direct
Acyl-CoA dehydrogenase NM domain-like0.0002014Direct
HSP20-like chaperones0.001601Inherited
Zn-binding ribosomal proteins0.001714Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.00334Inherited
Actin-like ATPase domain0.005183Inherited
Cytokine0.005688Inherited
Frizzled cysteine-rich domain0.006898Inherited
Heat shock protein 70kD (HSP70), peptide-binding domain0.007799Inherited
Thiolase-like0.008482Inherited
14-3-3 protein0.02401Inherited
Tropomyosin0.05038Inherited
PYP-like sensor domain (PAS domain)0.05136Inherited
Myosin rod fragments0.06192Inherited
EF-hand0.2113Inherited
Homeodomain-like0.2223Inherited
p53-like transcription factors0.2405Inherited
FnI-like domain0.2736Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
GDI-like N domain0Direct
Heat shock protein 90, HSP90, N-terminal domain0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
A20-like zinc finger0Direct
Mitochondrial cytochrome c oxidase subunit VIIa0Direct
HSP90 C-terminal domain0Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
GABARAP-like0Direct
Hsp90 middle domain0Direct
SRF-like0Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain0Direct
Malic enzyme N-domain0Direct
Canonical RBD0.0000004706Direct
HLH, helix-loop-helix DNA-binding domain0.0000006229Direct
Proteasome subunits0.000001824Direct
Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains0.000002969Direct
Medium chain acyl-CoA dehydrogenase-like, C-terminal domain0.000002969Direct
Hairy Orange domain0.00003834Direct
Actin/HSP700.00004616Direct
Group II chaperonin (CCT, TRIC), apical domain0.0001368Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.0003246Direct
Parvalbumin0.0017Inherited
Glutathione peroxidase-like0.002011Inherited
Thiolase-related0.002748Inherited
Translational machinery components0.002748Inherited
Frizzled cysteine-rich domain0.007953Inherited
Heat shock protein 70kD (HSP70), peptide-binding domain0.008168Inherited
Fibroblast growth factors (FGF)0.01449Inherited
Hypoxia-inducible factor Hif2a, C-terminal domain0.01728Inherited
Tropomyosin0.02Inherited
L domain0.02321Inherited
14-3-3 protein0.02321Inherited
T-box0.03798Inherited
Myosin rod fragments0.04498Inherited
28-residue LRR0.07722Inherited
Forkhead DNA-binding domain0.157Inherited
Erythroid transcription factor GATA-10.1757Inherited
Homeodomain0.3586Inherited
Motor proteins0.5774Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
HSP90 C-terminal domain0Direct
Mitochondrial cytochrome c oxidase subunit VIIa0Direct
SRF-like0Direct
HLH, helix-loop-helix DNA-binding domain0.0000001442Direct
RNA-binding domain, RBD0.00000549Direct
GroEL equatorial domain-like0.00001518Direct
Orange domain-like0.00002572Direct
GroEL-intermediate domain like0.00002572Direct
Translation proteins SH3-like domain0.0000316Direct
GroEL apical domain-like0.0001145Direct
Acyl-CoA dehydrogenase NM domain-like0.0001501Direct
Acyl-CoA dehydrogenase C-terminal domain-like0.0001501Direct
HSP20-like chaperones0.001224Inherited
Zn-binding ribosomal proteins0.001312Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.002573Inherited
Actin-like ATPase domain0.004025Inherited
Cytokine0.004424Inherited
Pentein0.004647Inherited
LDH C-terminal domain-like0.004647Inherited
Frizzled cysteine-rich domain0.005385Inherited
Heat shock protein 70kD (HSP70), peptide-binding domain0.006097Inherited
Thiolase-like0.006643Inherited
Translation proteins0.007128Inherited
14-3-3 protein0.01917Inherited
Tropomyosin0.04143Inherited
PYP-like sensor domain (PAS domain)0.04225Inherited
Myosin rod fragments0.05118Inherited
EF-hand0.1871Inherited
Homeodomain-like0.1977Inherited
p53-like transcription factors0.2149Inherited
FnI-like domain0.2459Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48371,46785
  • 48371 - ARM repeat
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0Direct
    52540,53254
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 53254 - Phosphoglycerate mutase-like
  • 0Direct
    54631,54631
  • 54631 - CBS-domain pair
  • 54631 - CBS-domain pair
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0Direct
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.00002572Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.00004111Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00009639Direct
    56645,47203
  • 56645 - Acyl-CoA dehydrogenase NM domain-like
  • 47203 - Acyl-CoA dehydrogenase C-terminal domain-like
  • 0.0001501Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.00151Inherited
    51735,56327
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 56327 - LDH C-terminal domain-like
  • 0.004647Inherited
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.006097Inherited
    100920,100934
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.006454Inherited
    53901,53901
  • 53901 - Thiolase-like
  • 53901 - Thiolase-like
  • 0.006643Inherited
    52058,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.01917Inherited
    57184,52058
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.01917Inherited
    47459,55785
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.04121Inherited
    55785,55785
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.0681Inherited
    57184,57184
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.1189Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    90257,90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0Direct
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0Direct
    57196,57184,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.004647Inherited
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.006097Inherited
    53067,100920,100934
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.006454Inherited
    47459,55785,55785
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.03848Inherited
    48371,48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.07083Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.2005Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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