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Xenopus ANatomical entity (XAN): blastema

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + 4:   anatomical structure [XAO:0003000] <11>(576|729) (576|397|162)
+ + + + 4:   whole organism [XAO:0003004] <12>(464|596) (467|333|144)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(438|563) (440|323|141)
+ + 2:   tissue [XAO:0003040] <186>(182|249) (188|129|56)
+ 1:   regenerating tissue [XAO:0004059] <16>(7|8) (7|1|1)
0:   blastema [XAO:0004060] <12>(7|8) (7|1|1)
- 1:   regenerating limb [XAO:0004311] <4>(3|4) (3|0|0)
- 1:   wound epidermis [XAO:0004397] <2>(0|1) (0|1|1)
- 1:   regenerating eye [XAO:0004109] <1>(0|0) (0|0|0)
- 1:   Leydig cell [XAO:0004405](0|0) (0|0|0)
- 1:   apical epithelial cap [XAO:0004401](0|0) (0|0|0)
- 1:   apical mesenchyme [XAO:0004396](0|0) (0|0|0)
- 1:   fibrocellular pad [XAO:0004403](0|0) (0|0|0)
- 1:   keratinocyte [XAO:0004404](0|0) (0|0|0)
- 1:   regenerating fin [XAO:0004312](0|0) (0|0|0)
- 1:   regenerating pelvic girdle [XAO:0005269](0|0) (0|0|0)
- 1:   regenerating tail [XAO:0004108](0|0) (0|0|0)
- 1:   regenerating zeugopod skeleton [XAO:0004400](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Cystine-knot cytokines0.0000009982Direct
Homeodomain-like0.000003837Direct
HLH, helix-loop-helix DNA-binding domain0.000007532Direct
Cytokine0.0001541Direct
p53-like transcription factors0.0004606Direct
Intermediate filament protein, coiled coil region0.0004606Direct
Protein kinase-like (PK-like)0.1493Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.000001179Direct
HLH, helix-loop-helix DNA-binding domain0.0000146Direct
Transforming growth factor (TGF)-beta0.00001614Direct
T-box0.0001366Direct
Fibroblast growth factors (FGF)0.0001366Direct
Intermediate filament protein, coiled coil region0.0006045Direct
I set domains0.03221Inherited
Protein kinases, catalytic subunit0.1529Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Cystine-knot cytokines0.0000007116Direct
Homeodomain-like0.000002758Direct
HLH, helix-loop-helix DNA-binding domain0.000005436Direct
Cytokine0.0001145Direct
p53-like transcription factors0.000347Direct
Intermediate filament protein, coiled coil region0.000347Direct
Protein kinase-like (PK-like)0.1298Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.1392Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.05662Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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