SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Yeast Phenotype (YP): development

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: YP Hierarchy (yeast phenotype from Ascomycete phenotype ontology)

Shortest distance to current term (+ for parents, - for children) YP term [YP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ 1:   observable [APO:0000017] <7>
0:   development [APO:0000023] <8>(16|20) (16|6|1)
- 1:   sexual cycle [APO:0000031] <5>(2|5) (2|0|0)
- 1:   filamentous growth [APO:0000027] <4>(0|0) (0|0|0)
- 1:   budding [APO:0000024] <2>(3|2) (3|1|0)
- 1:   formation of anatomical structure [APO:0000291] <2>(0|0) (0|0|0)
- 1:   lifespan [APO:0000030] <2>(9|11) (9|4|1)
- 1:   conidiation [APO:0000295] <1>(0|0) (0|0|0)
- 1:   chlamydospore formation [APO:0000319](0|0) (0|0|0)
- 1:   phenotypic switching [APO:0000321](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Ribosomal protein S80Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
DNA-binding domain of Mlu1-box binding protein MBP10Direct
F1F0 ATP synthase subunit C0Direct
AMPKBI-like0Direct
GYF domain0Direct
Regulator of G-protein signaling, RGS0Direct
SAM/Pointed domain0Direct
FtsH protease domain-like0Direct
Bromodomain0.002652Inherited
Isocitrate/Isopropylmalate dehydrogenase-like0.003018Inherited
Cyclin-like0.01381Inherited
Ubiquitin-like0.02225Inherited
Histone-fold0.1751Inherited
P-loop containing nucleoside triphosphate hydrolases0.9527Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
DNA-binding domain of Mlu1-box binding protein MBP10Direct
RecA protein-like (ATPase-domain)0Direct
DJ-1/PfpI0Direct
GYF domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Regulator of G-protein signaling, RGS0Direct
Ribosomal protein S80Direct
Trehalose-6-phosphate synthase, OtsA0Direct
AMPKBI-like0Direct
FtsH protease domain-like0Direct
SAM (sterile alpha motif) domain0Direct
Vacuolar sorting protein domain0Direct
F1F0 ATP synthase subunit C0Direct
BCR-homology GTPase activation domain (BH-domain)0.0004643Direct
Bromodomain0.002858Inherited
Dimeric isocitrate & isopropylmalate dehydrogenases0.003019Inherited
Cyclin0.004554Inherited
Nucleosome core histones0.01979Inherited
Inositol polyphosphate 5-phosphatase (IPP5)0.04424Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
FtsH protease domain-like0Direct
AMPKBI-like0Direct
Ribosomal protein S80Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
SAM/Pointed domain0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
DNA-binding domain of Mlu1-box binding protein MBP10Direct
F1F0 ATP synthase subunit C0Direct
GYF domain0Direct
Regulator of G-protein signaling, RGS0Direct
Bromodomain0.002219Inherited
Isocitrate/Isopropylmalate dehydrogenase-like0.002528Inherited
Cyclin-like0.01184Inherited
Ubiquitin-like0.01927Inherited
Histone-fold0.1618Inherited
P-loop containing nucleoside triphosphate hydrolases0.9472Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
53756,56784
  • 53756 - UDP-Glycosyltransferase/glycogen phosphorylase
  • 56784 - HAD-like
  • 0Direct
    52540,140990
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 140990 - FtsH protease domain-like
  • 0Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0Direct
    50615,52540
  • 50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.03839Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50615,52540,47917
  • 50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)