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Yeast Phenotype (YP): cellular morphology

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Root: YP Hierarchy (yeast phenotype from Ascomycete phenotype ontology)

Shortest distance to current term (+ for parents, - for children) YP term [YP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   observable [APO:0000017] <7>
+ 1:   morphology [APO:0000049] <2>(23|20) (25|7|2)
0:   cellular morphology [APO:0000050] <6>(18|16) (20|6|1)
- 1:   subcellular morphology [APO:0000226] <6>(12|8) (13|5|0)
- 1:   cell size [APO:0000052] <2>(1|2) (1|0|0)
- 1:   bud morphology [APO:0000212](0|1) (1|0|0)
- 1:   bud neck morphology [APO:0000056](0|0) (0|0|0)
- 1:   cell shape [APO:0000051](0|0) (0|0|0)
- 1:   mating projection morphology [APO:0000223](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
F1F0 ATP synthase subunit C0Direct
Cdc48 domain 2-like0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Cap-Gly domain0Direct
FtsH protease domain-like0Direct
Ribosomal protein L130Direct
S13-like H2TH domain0Direct
Nop domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Prefoldin0.0002052Direct
SAICAR synthase-like0.003178Inherited
Cyclin-like0.02211Inherited
SH3-domain0.03456Inherited
Thiolase-like0.04147Inherited
PP2C-like0.5387Inherited
PH domain-like0.5389Inherited
Nucleotide-diphospho-sugar transferases0.5437Inherited
alpha/beta-Hydrolases0.7208Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
F1F0 ATP synthase subunit C0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Ribosomal protein S130Direct
Cdc48 domain 2-like0Direct
Cap-Gly domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
FtsH protease domain-like0Direct
Ribosomal protein L130Direct
Prefoldin0.002783Inherited
Cyclin0.03327Inherited
SH3-domain0.03504Inherited
GHMP Kinase, N-terminal domain0.0763Inherited
Pepsin-like0.1307Inherited
Actin/HSP700.1738Inherited
Tyrosine-dependent oxidoreductases0.3731Inherited
PP2C-like0.5279Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Ribosomal protein L130Direct
Cdc48 domain 2-like0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
FtsH protease domain-like0Direct
S13-like H2TH domain0Direct
F1F0 ATP synthase subunit C0Direct
Nop domain0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Cap-Gly domain0Direct
Prefoldin0.0001686Direct
SAICAR synthase-like0.002666Inherited
Cyclin-like0.01914Inherited
SH3-domain0.03026Inherited
Thiolase-like0.03649Inherited
Acid proteases0.2635Inherited
PP2C-like0.5228Inherited
PH domain-like0.5231Inherited
Nucleotide-diphospho-sugar transferases0.528Inherited
Sm-like ribonucleoproteins0.648Inherited
alpha/beta-Hydrolases0.7082Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50615,52540
  • 50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    52540,140990
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 140990 - FtsH protease domain-like
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.01761Inherited
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.7338Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50615,52540,47917
  • 50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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