SUPERFAMILY 1.75 HMM library and genome assignments server

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ARM repeat superfamily

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All alpha proteins [ 46456] (284)
Fold:   alpha-alpha superhelix [ 48370] (24)
Superfamily:   ARM repeat [ 48371] (23)
Families:   Armadillo repeat [ 48372] (6)
  Clathrin adaptor core protein [ 74771] (2)
  HEAT repeat [ 48385] (2)
  MIF4G domain-like [ 100908] (5)
  PHAT domain [ 89129]
  Mo25 protein [ 101407]
  Leukotriene A4 hydrolase C-terminal domain [ 63608]
  Clathrin heavy chain proximal leg segment [ 48390]
  Clathrin heavy-chain linker domain [ 48393]
  Leucine-rich repeat variant [ 48396]
  Phoshoinositide 3-kinase (PI3K) helical domain [ 48399]
  Pumilio repeat [ 63611]
  Regulatory subunit H of the V-type ATPase [ 63614]
  PBS lyase HEAT-like repeat [ 101410] (2)
  BC3264-like [ 109965] (2)
  Eukaryotic translation initiation factor 3 subunit 12, eIF3k, N-terminal domain [ 109968]
  Exportin HEAT-like repeat [ 117002]
  B56-like [ 140819]
  HspBP1 domain [ 140822]
  GUN4-associated domain [ 140825] (2)
  Diap1 N-terninal region-like [ 140830]
  Plakophilin 1 helical region [ 140833]
  RPA1889-like [ 158764]


Superfamily statistics
Genomes (2,503) Uniprot 2017_06 genome PDB chains (SCOP 1.75)
Domains 147,501 393,346 107
Proteins 123,570 332,307 92


Functional annotation
General category General
Detailed category General

Document:
Function annotation of SCOP domain superfamilies

Gene Ontology (high-quality)

(show details)
GO termFDR (singleton)FDR (all)SDFO levelAnnotation (direct or inherited)
Biological Process (BP)biological regulation0.00030960.00000006075Least InformativeDirect
Biological Process (BP)cellular component organization or biogenesis0.006120Least InformativeInherited
Biological Process (BP)multicellular organismal process0.0010020.0000001345Least InformativeInherited
Biological Process (BP)macromolecule metabolic process0.680.008116Least InformativeInherited
Biological Process (BP)organonitrogen compound metabolic process11Least InformativeInherited
Biological Process (BP)biosynthetic process11Least InformativeInherited
Biological Process (BP)single-organism cellular process10.03637Least InformativeInherited
Biological Process (BP)primary metabolic process11Least InformativeInherited
Biological Process (BP)organic cyclic compound metabolic process11Least InformativeInherited
Biological Process (BP)cellular aromatic compound metabolic process11Least InformativeInherited
Biological Process (BP)heterocycle metabolic process11Least InformativeInherited
Biological Process (BP)cellular nitrogen compound metabolic process11Least InformativeInherited
Biological Process (BP)cellular localization0.00000000056950Moderately InformativeDirect
Biological Process (BP)macromolecule localization0.0000000060580Moderately InformativeDirect
Biological Process (BP)nitrogen compound transport0.000027260.000000000006065Moderately InformativeDirect
Biological Process (BP)reproduction0.00004280.000000001023Moderately InformativeDirect
Biological Process (BP)single-organism transport0.10261Moderately InformativeInherited
Biological Process (BP)multi-organism process0.017510.02308Moderately InformativeInherited
Biological Process (BP)regulation of biological quality10.09773Moderately InformativeInherited
Biological Process (BP)organelle organization0.80840.0000000000006581Moderately InformativeInherited
Biological Process (BP)regulation of macromolecule biosynthetic process0.093121Moderately InformativeInherited
Biological Process (BP)regulation of protein metabolic process0.34540.0000000000006409Moderately InformativeInherited
Biological Process (BP)regulation of cellular biosynthetic process0.84611Moderately InformativeInherited
Biological Process (BP)organic substance transport0.0012330.0006831Moderately InformativeInherited
Biological Process (BP)gene expression0.0017780.0009699Moderately InformativeInherited
Biological Process (BP)cellular protein modification process0.080861Moderately InformativeInherited
Biological Process (BP)cell differentiation0.00015041Moderately InformativeInherited
Biological Process (BP)negative regulation of metabolic process10.336Moderately InformativeInherited
Biological Process (BP)regulation of gene expression11Moderately InformativeInherited
Biological Process (BP)RNA metabolic process0.047370.3318Moderately InformativeInherited
Biological Process (BP)cellular catabolic process0.66370.0000000001149Moderately InformativeInherited
Biological Process (BP)organic substance catabolic process10.005342Moderately InformativeInherited
Biological Process (BP)negative regulation of cellular process0.026360.0005556Moderately InformativeInherited
Biological Process (BP)protein transport0.00000000012940.000000001074InformativeDirect
Biological Process (BP)single-organism cellular localization0.00000000031310.0000000001131InformativeDirect
Biological Process (BP)cell cycle process0.0000000008090InformativeDirect
Biological Process (BP)single organism reproductive process0.0000033290.00000000006274InformativeDirect
Biological Process (BP)intracellular transport0.00001040InformativeDirect
Biological Process (BP)posttranscriptional regulation of gene expression0.00015710InformativeDirect
Biological Process (BP)microtubule-based process0.00063860InformativeDirect
Biological Process (BP)interspecies interaction between organisms0.69671InformativeInherited
Biological Process (BP)organelle localization0.24030.143InformativeInherited
Biological Process (BP)mitotic cell cycle0.54450.007073InformativeInherited
Biological Process (BP)protein localization to organelle0.0013560.5358InformativeInherited
Biological Process (BP)regulation of cellular amide metabolic process0.029640.00000000000007466InformativeInherited
Biological Process (BP)multicellular organism reproduction0.00017060.05013InformativeInherited
Biological Process (BP)negative regulation of gene expression0.29941InformativeInherited
Biological Process (BP)negative regulation of cellular protein metabolic process0.14970.000442InformativeInherited
Biological Process (BP)negative regulation of macromolecule biosynthetic process0.75150.8467InformativeInherited
Biological Process (BP)negative regulation of cellular biosynthetic process0.77621InformativeInherited
Biological Process (BP)peptidyl-amino acid modification0.000053630.5485InformativeInherited
Biological Process (BP)generation of neurons0.0018290.9878InformativeInherited
Biological Process (BP)cellular macromolecule catabolic process0.0021430.000000000001368InformativeInherited
Biological Process (BP)nucleobase-containing compound catabolic process0.0065240.000009539InformativeInherited
Biological Process (BP)regulation of cell cycle0.0019710.00000000000003269InformativeInherited
Biological Process (BP)protein import00Highly InformativeDirect
Biological Process (BP)single-organism nuclear import00.000000000000003734Highly InformativeDirect
Biological Process (BP)protein localization to nucleus0.0000000025630.0000000000005283Highly InformativeDirect
Biological Process (BP)cell cycle checkpoint0.00013710.0001967Highly InformativeDirect
Biological Process (BP)RNA catabolic process0.000160.0000001131Highly InformativeDirect
Biological Process (BP)microtubule cytoskeleton organization0.00017170.000001621Highly InformativeDirect
Biological Process (BP)regulation of RNA stability0.0002350.00000155Highly InformativeDirect
Biological Process (BP)negative regulation of translation0.00065590.000002163Highly InformativeDirect
Biological Process (BP)pigmentation0.00072150.0002228Highly InformativeDirect
Biological Process (BP)cell proliferation0.048840.009887Highly InformativeInherited
Biological Process (BP)viral process0.00036780.003872Highly InformativeInherited
Biological Process (BP)establishment of organelle localization0.086060.00000007324Highly InformativeInherited
Biological Process (BP)protein maturation0.000000000019240.004458Highly InformativeInherited
Biological Process (BP)peptidyl-lysine modification0.00045250.2107Highly InformativeInherited
Molecular Function (MF)binding0.00000022280Least InformativeDirect
Molecular Function (MF)molecular function regulator0.000018110.00000000000107Moderately InformativeDirect
Molecular Function (MF)oxidoreductase activity11Moderately InformativeInherited
Molecular Function (MF)transporter activity0.96511Moderately InformativeInherited
Molecular Function (MF)nucleic acid binding0.019940.6631Moderately InformativeInherited
Molecular Function (MF)RNA binding0.00023140.0000000000000123InformativeDirect
Molecular Function (MF)amide binding0.042850.4949InformativeInherited
Molecular Function (MF)phosphatase regulator activity0.0000000002890.00000000982Highly InformativeDirect
Molecular Function (MF)protein transporter activity0.00000029460Highly InformativeDirect
Molecular Function (MF)cell adhesion molecule binding0.029480.001488Highly InformativeInherited
Molecular Function (MF)monooxygenase activity0.00000000014530.36Highly InformativeInherited
Molecular Function (MF)oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxyge0.000000024160.7353Highly InformativeInherited
Molecular Function (MF)peptide binding0.0040320.02597Highly InformativeInherited
Cellular Component (CC)intracellular organelle part0.16310.00000007484Least InformativeInherited
Cellular Component (CC)protein complex0.67840.0000000000002384Least InformativeInherited
Cellular Component (CC)non-membrane-bounded organelle0.0092520.00000000000001166Least InformativeInherited
Cellular Component (CC)cytoplasmic part11Least InformativeInherited
Cellular Component (CC)intracellular membrane-bounded organelle0.22070.7407Least InformativeInherited
Cellular Component (CC)nuclear part0.000042550.00000000002171Moderately InformativeDirect
Cellular Component (CC)cytoskeleton0.082960.0007004Moderately InformativeInherited
Cellular Component (CC)endomembrane system0.84660.000000000518Moderately InformativeInherited
Cellular Component (CC)microtubule cytoskeleton0.00034830.000000003407InformativeDirect
Cellular Component (CC)nuclear envelope0.00076620.000000000002044InformativeDirect
Cellular Component (CC)chromosome0.51230.003514InformativeInherited
Cellular Component (CC)protein serine/threonine phosphatase complex00Highly InformativeDirect
Cellular Component (CC)CCR4-NOT complex0.0000000020870.0004348Highly InformativeDirect
Cellular Component (CC)nuclear pore0.000009780Highly InformativeDirect
Cellular Component (CC)peptidase complex10.0002101Highly InformativeInherited

Document: GO annotation of SCOP domains

Gene Ontology (high-coverage)

(show details)
GO term FDR (all) SDFO level Annotation (direct or inherited)
Biological Process (BP) biological regulation 0.00000006075 Least Informative Direct
Biological Process (BP) multicellular organismal process 0.0000001345 Least Informative Direct
Biological Process (BP) cellular component organization or biogenesis 0 Least Informative Direct
Biological Process (BP) cellular aromatic compound metabolic process 1 Least Informative Inherited
Biological Process (BP) heterocycle metabolic process 1 Least Informative Inherited
Biological Process (BP) single-organism metabolic process 1 Least Informative Inherited
Biological Process (BP) organonitrogen compound metabolic process 1 Least Informative Inherited
Biological Process (BP) response to stimulus 1 Least Informative Inherited
Biological Process (BP) organic cyclic compound metabolic process 1 Least Informative Inherited
Biological Process (BP) primary metabolic process 1 Least Informative Inherited
Biological Process (BP) macromolecule metabolic process 0.008116 Least Informative Inherited
Biological Process (BP) biosynthetic process 1 Least Informative Inherited
Biological Process (BP) single-organism cellular process 0.03637 Least Informative Inherited
Biological Process (BP) cellular nitrogen compound metabolic process 1 Least Informative Inherited
Biological Process (BP) cellular localization 0 Moderately Informative Direct
Biological Process (BP) macromolecule localization 0 Moderately Informative Direct
Biological Process (BP) nitrogen compound transport 0.000000000006065 Moderately Informative Direct
Biological Process (BP) reproduction 0.000000001023 Moderately Informative Direct
Biological Process (BP) organic substance transport 0.0006831 Moderately Informative Direct
Biological Process (BP) gene expression 0.0009699 Moderately Informative Direct
Biological Process (BP) negative regulation of cellular process 0.0005556 Moderately Informative Direct
Biological Process (BP) regulation of protein metabolic process 0.0000000000006409 Moderately Informative Direct
Biological Process (BP) cellular response to stress 0.00000000686 Moderately Informative Direct
Biological Process (BP) regulation of molecular function 0.0001375 Moderately Informative Direct
Biological Process (BP) cellular catabolic process 0.0000000001149 Moderately Informative Direct
Biological Process (BP) organelle organization 0.0000000000006581 Moderately Informative Direct
Biological Process (BP) regulation of cellular component organization 0 Moderately Informative Direct
Biological Process (BP) peptide metabolic process 0.000000079 Moderately Informative Direct
Biological Process (BP) cellular response to chemical stimulus 1 Moderately Informative Inherited
Biological Process (BP) response to organic substance 1 Moderately Informative Inherited
Biological Process (BP) regulation of localization 0.5637 Moderately Informative Inherited
Biological Process (BP) regulation of biological quality 0.09773 Moderately Informative Inherited
Biological Process (BP) single-organism transport 1 Moderately Informative Inherited
Biological Process (BP) organic substance catabolic process 0.005342 Moderately Informative Inherited
Biological Process (BP) regulation of developmental process 0.3864 Moderately Informative Inherited
Biological Process (BP) RNA metabolic process 0.3318 Moderately Informative Inherited
Biological Process (BP) aromatic compound biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) heterocycle biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) response to oxygen-containing compound 1 Moderately Informative Inherited
Biological Process (BP) response to endogenous stimulus 1 Moderately Informative Inherited
Biological Process (BP) anatomical structure morphogenesis 1 Moderately Informative Inherited
Biological Process (BP) regulation of macromolecule biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) regulation of multicellular organismal process 1 Moderately Informative Inherited
Biological Process (BP) protein complex biogenesis 0.9608 Moderately Informative Inherited
Biological Process (BP) multi-organism process 0.02308 Moderately Informative Inherited
Biological Process (BP) response to external stimulus 0.8189 Moderately Informative Inherited
Biological Process (BP) cell differentiation 1 Moderately Informative Inherited
Biological Process (BP) organophosphate biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) regulation of nucleobase-containing compound metabolic process 1 Moderately Informative Inherited
Biological Process (BP) regulation of response to stimulus 1 Moderately Informative Inherited
Biological Process (BP) regulation of signaling 1 Moderately Informative Inherited
Biological Process (BP) small molecule biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) cellular protein modification process 1 Moderately Informative Inherited
Biological Process (BP) regulation of cellular biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) regulation of cell communication 1 Moderately Informative Inherited
Biological Process (BP) positive regulation of metabolic process 1 Moderately Informative Inherited
Biological Process (BP) negative regulation of metabolic process 0.336 Moderately Informative Inherited
Biological Process (BP) cellular component assembly 0.5974 Moderately Informative Inherited
Biological Process (BP) single organism signaling 0.9908 Moderately Informative Inherited
Biological Process (BP) macromolecular complex subunit organization 1 Moderately Informative Inherited
Biological Process (BP) organic cyclic compound biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) lipid metabolic process 1 Moderately Informative Inherited
Biological Process (BP) cellular macromolecule biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) amide biosynthetic process 0.3273 Moderately Informative Inherited
Biological Process (BP) cell communication 0.3157 Moderately Informative Inherited
Biological Process (BP) animal organ development 1 Moderately Informative Inherited
Biological Process (BP) positive regulation of cellular process 0.3594 Moderately Informative Inherited
Biological Process (BP) tissue development 1 Moderately Informative Inherited
Biological Process (BP) regulation of gene expression 1 Moderately Informative Inherited
Biological Process (BP) protein transport 0.000000001074 Informative Direct
Biological Process (BP) single-organism cellular localization 0.0000000001131 Informative Direct
Biological Process (BP) cell cycle process 0 Informative Direct
Biological Process (BP) single organism reproductive process 0.00000000006274 Informative Direct
Biological Process (BP) intracellular transport 0 Informative Direct
Biological Process (BP) posttranscriptional regulation of gene expression 0 Informative Direct
Biological Process (BP) microtubule-based process 0 Informative Direct
Biological Process (BP) regulation of cell cycle 0.00000000000003269 Informative Direct
Biological Process (BP) cellular macromolecule catabolic process 0.000000000001368 Informative Direct
Biological Process (BP) nucleobase-containing compound catabolic process 0.000009539 Informative Direct
Biological Process (BP) regulation of cellular amide metabolic process 0.00000000000007466 Informative Direct
Biological Process (BP) negative regulation of cellular protein metabolic process 0.000442 Informative Direct
Biological Process (BP) cellular protein complex assembly 0.0000003207 Informative Direct
Biological Process (BP) regulation of cellular component biogenesis 0 Informative Direct
Biological Process (BP) regulation of nervous system development 0.0002417 Informative Direct
Biological Process (BP) negative regulation of cellular component organization 0.00006433 Informative Direct
Biological Process (BP) intracellular signal transduction 0.0001364 Informative Direct
Biological Process (BP) post-embryonic development 0.0009884 Informative Direct
Biological Process (BP) response to extracellular stimulus 0.0001414 Informative Direct
Biological Process (BP) regulation of catabolic process 0.00000001827 Informative Direct
Biological Process (BP) positive regulation of cellular component organization 0.0001605 Informative Direct
Biological Process (BP) regulation of organelle organization 0.0001324 Informative Direct
Biological Process (BP) vesicle-mediated transport 0.00000000000001422 Informative Direct
Biological Process (BP) glycerolipid metabolic process 0.0000000004465 Informative Direct
Biological Process (BP) phospholipid metabolic process 0.000000001721 Informative Direct
Biological Process (BP) supramolecular fiber organization 0.00000376 Informative Direct
Biological Process (BP) regulation of anatomical structure size 0.00003104 Informative Direct
Biological Process (BP) regulation of locomotion 0.3679 Informative Inherited
Biological Process (BP) regulation of protein localization 0.08033 Informative Inherited
Biological Process (BP) regulation of cellular localization 0.05989 Informative Inherited
Biological Process (BP) cell surface receptor signaling pathway 0.3271 Informative Inherited
Biological Process (BP) positive regulation of nucleobase-containing compound metabolic process 0.9568 Informative Inherited
Biological Process (BP) regulation of protein modification process 1 Informative Inherited
Biological Process (BP) regulation of cell proliferation 1 Informative Inherited
Biological Process (BP) negative regulation of response to stimulus 0.01947 Informative Inherited
Biological Process (BP) regulation of defense response 1 Informative Inherited
Biological Process (BP) regulation of anatomical structure morphogenesis 0.00224 Informative Inherited
Biological Process (BP) regulation of cell differentiation 0.8915 Informative Inherited
Biological Process (BP) transcription, DNA-templated 0.7023 Informative Inherited
Biological Process (BP) positive regulation of immune system process 1 Informative Inherited
Biological Process (BP) cellular response to DNA damage stimulus 0.00476 Informative Inherited
Biological Process (BP) mitotic cell cycle 0.007073 Informative Inherited
Biological Process (BP) negative regulation of molecular function 0.7989 Informative Inherited
Biological Process (BP) regulation of transferase activity 1 Informative Inherited
Biological Process (BP) regulation of phosphorylation 1 Informative Inherited
Biological Process (BP) actin cytoskeleton organization 1 Informative Inherited
Biological Process (BP) cell development 0.3089 Informative Inherited
Biological Process (BP) cellular component morphogenesis 1 Informative Inherited
Biological Process (BP) cellular response to oxygen-containing compound 1 Informative Inherited
Biological Process (BP) response to organic cyclic compound 1 Informative Inherited
Biological Process (BP) response to nitrogen compound 0.5243 Informative Inherited
Biological Process (BP) interspecies interaction between organisms 1 Informative Inherited
Biological Process (BP) organelle localization 0.143 Informative Inherited
Biological Process (BP) multi-organism reproductive process 0.004391 Informative Inherited
Biological Process (BP) phosphorylation 0.03287 Informative Inherited
Biological Process (BP) secondary metabolic process 1 Informative Inherited
Biological Process (BP) negative regulation of multicellular organismal process 1 Informative Inherited
Biological Process (BP) regulation of growth 0.6101 Informative Inherited
Biological Process (BP) negative regulation of signaling 0.0372 Informative Inherited
Biological Process (BP) negative regulation of cell communication 0.04361 Informative Inherited
Biological Process (BP) generation of neurons 0.9878 Informative Inherited
Biological Process (BP) positive regulation of developmental process 0.1957 Informative Inherited
Biological Process (BP) positive regulation of multicellular organismal process 1 Informative Inherited
Biological Process (BP) positive regulation of catalytic activity 0.4929 Informative Inherited
Biological Process (BP) locomotion 0.003573 Informative Inherited
Biological Process (BP) regulation of hydrolase activity 0.1799 Informative Inherited
Biological Process (BP) animal organ morphogenesis 1 Informative Inherited
Biological Process (BP) growth 0.02081 Informative Inherited
Biological Process (BP) regulation of immune response 1 Informative Inherited
Biological Process (BP) developmental process involved in reproduction 0.1431 Informative Inherited
Biological Process (BP) chromosome organization 0.5998 Informative Inherited
Biological Process (BP) regulation of intracellular signal transduction 0.8329 Informative Inherited
Biological Process (BP) ncRNA processing 0.08273 Informative Inherited
Biological Process (BP) organelle assembly 0.7641 Informative Inherited
Biological Process (BP) ribonucleoprotein complex subunit organization 0.8316 Informative Inherited
Biological Process (BP) positive regulation of macromolecule biosynthetic process 1 Informative Inherited
Biological Process (BP) positive regulation of gene expression 1 Informative Inherited
Biological Process (BP) localization of cell 1 Informative Inherited
Biological Process (BP) regulation of cellular component movement 0.768 Informative Inherited
Biological Process (BP) anatomical structure formation involved in morphogenesis 1 Informative Inherited
Biological Process (BP) peptidyl-amino acid modification 0.5485 Informative Inherited
Biological Process (BP) negative regulation of macromolecule biosynthetic process 0.8467 Informative Inherited
Biological Process (BP) negative regulation of gene expression 1 Informative Inherited
Biological Process (BP) central nervous system development 0.4862 Informative Inherited
Biological Process (BP) positive regulation of cellular biosynthetic process 1 Informative Inherited
Biological Process (BP) cell death 0.001077 Informative Inherited
Biological Process (BP) proteolysis 0.05094 Informative Inherited
Biological Process (BP) behavior 0.2731 Informative Inherited
Biological Process (BP) negative regulation of cellular biosynthetic process 1 Informative Inherited
Biological Process (BP) movement of cell or subcellular component 0.002789 Informative Inherited
Biological Process (BP) system process 1 Informative Inherited
Biological Process (BP) multicellular organism reproduction 0.05013 Informative Inherited
Biological Process (BP) pigment metabolic process 0.9501 Informative Inherited
Biological Process (BP) protein localization to organelle 0.5358 Informative Inherited
Biological Process (BP) circulatory system development 0.7423 Informative Inherited
Biological Process (BP) regulation of response to external stimulus 1 Informative Inherited
Biological Process (BP) embryo development 0.6986 Informative Inherited
Biological Process (BP) epithelium development 0.03465 Informative Inherited
Biological Process (BP) protein import 0 Highly Informative Direct
Biological Process (BP) single-organism nuclear import 0.000000000000003734 Highly Informative Direct
Biological Process (BP) protein localization to nucleus 0.0000000000005283 Highly Informative Direct
Biological Process (BP) cell cycle checkpoint 0.0001967 Highly Informative Direct
Biological Process (BP) RNA catabolic process 0.0000001131 Highly Informative Direct
Biological Process (BP) microtubule cytoskeleton organization 0.000001621 Highly Informative Direct
Biological Process (BP) regulation of RNA stability 0.00000155 Highly Informative Direct
Biological Process (BP) negative regulation of translation 0.000002163 Highly Informative Direct
Biological Process (BP) pigmentation 0.0002228 Highly Informative Direct
Biological Process (BP) autophagy 0.0000000844 Highly Informative Direct
Biological Process (BP) cell-cell signaling 0.000000002223 Highly Informative Direct
Biological Process (BP) establishment or maintenance of cell polarity 0 Highly Informative Direct
Biological Process (BP) cell projection assembly 0.0005166 Highly Informative Direct
Biological Process (BP) regulation of cell division 0.0000000009684 Highly Informative Direct
Biological Process (BP) establishment of organelle localization 0.00000007324 Highly Informative Direct
Biological Process (BP) regulation of DNA metabolic process 0.00004635 Highly Informative Direct
Biological Process (BP) rRNA metabolic process 0.0003277 Highly Informative Direct
Biological Process (BP) cell growth 0.00006669 Highly Informative Direct
Biological Process (BP) positive regulation of cellular component biogenesis 0.00000000006985 Highly Informative Direct
Biological Process (BP) endomembrane system organization 0.000001947 Highly Informative Direct
Biological Process (BP) nuclear division 0 Highly Informative Direct
Biological Process (BP) regulation of GTPase activity 0 Highly Informative Direct
Biological Process (BP) establishment of RNA localization 0 Highly Informative Direct
Biological Process (BP) translational initiation 0.00000000000002436 Highly Informative Direct
Biological Process (BP) phosphatidylinositol metabolic process 0.000000000007515 Highly Informative Direct
Biological Process (BP) regulation of microtubule-based process 0.00000000005952 Highly Informative Direct
Biological Process (BP) nuclear chromosome segregation 0.0000000001168 Highly Informative Direct
Biological Process (BP) regulation of chromosome segregation 0.00000000315 Highly Informative Direct
Biological Process (BP) programmed cell death involved in cell development 0.00000000369 Highly Informative Direct
Biological Process (BP) nucleobase-containing compound transport 0.00000001655 Highly Informative Direct
Biological Process (BP) cellular response to extracellular stimulus 0.0000001077 Highly Informative Direct
Biological Process (BP) lipid modification 0.0000002825 Highly Informative Direct
Biological Process (BP) positive regulation of supramolecular fiber organization 0.000002137 Highly Informative Direct
Biological Process (BP) protein polymerization 0.00002911 Highly Informative Direct
Biological Process (BP) post-translational protein modification 0.00006358 Highly Informative Direct
Biological Process (BP) microtubule-based movement 0.0001746 Highly Informative Direct
Biological Process (BP) ribonucleoprotein complex localization 0.0001759 Highly Informative Direct
Biological Process (BP) positive regulation of cell migration 0.0006969 Highly Informative Direct
Biological Process (BP) regulation of protein polymerization 0.000859 Highly Informative Direct
Biological Process (BP) post-embryonic animal morphogenesis 0.000931 Highly Informative Direct
Biological Process (BP) regulation of protein modification by small protein conjugation or removal 0.0009392 Highly Informative Direct
Biological Process (BP) negative regulation of cellular component movement 0.9171 Highly Informative Inherited
Biological Process (BP) negative regulation of locomotion 0.9587 Highly Informative Inherited
Biological Process (BP) regulation of chromosome organization 0.9322 Highly Informative Inherited
Biological Process (BP) negative regulation of immune system process 1 Highly Informative Inherited
Biological Process (BP) regulation of T cell activation 0.5426 Highly Informative Inherited
Biological Process (BP) negative regulation of cell cycle phase transition 0.4322 Highly Informative Inherited
Biological Process (BP) negative regulation of defense response 0.226 Highly Informative Inherited
Biological Process (BP) negative regulation of multi-organism process 1 Highly Informative Inherited
Biological Process (BP) negative regulation of response to external stimulus 1 Highly Informative Inherited
Biological Process (BP) negative regulation of protein modification process 0.125 Highly Informative Inherited
Biological Process (BP) positive regulation of cell adhesion 0.4936 Highly Informative Inherited
Biological Process (BP) regulation of cell morphogenesis involved in differentiation 0.007749 Highly Informative Inherited
Biological Process (BP) nucleic acid phosphodiester bond hydrolysis 0.1724 Highly Informative Inherited
Biological Process (BP) mRNA processing 1 Highly Informative Inherited
Biological Process (BP) meiotic cell cycle 0.01053 Highly Informative Inherited
Biological Process (BP) regulation of leukocyte migration 0.5364 Highly Informative Inherited
Biological Process (BP) regulation of mitotic cell cycle phase transition 0.1458 Highly Informative Inherited
Biological Process (BP) negative regulation of mitotic cell cycle 0.1217 Highly Informative Inherited
Biological Process (BP) regulation of binding 0.268 Highly Informative Inherited
Biological Process (BP) negative regulation of transferase activity 0.03688 Highly Informative Inherited
Biological Process (BP) negative regulation of phosphate metabolic process 0.3718 Highly Informative Inherited
Biological Process (BP) actin filament organization 0.5014 Highly Informative Inherited
Biological Process (BP) striated muscle cell development 1 Highly Informative Inherited
Biological Process (BP) cellular component assembly involved in morphogenesis 1 Highly Informative Inherited
Biological Process (BP) actomyosin structure organization 1 Highly Informative Inherited
Biological Process (BP) cellular response to organonitrogen compound 0.05699 Highly Informative Inherited
Biological Process (BP) response to alcohol 0.7 Highly Informative Inherited
Biological Process (BP) positive regulation of response to external stimulus 0.7461 Highly Informative Inherited
Biological Process (BP) cell proliferation 0.009887 Highly Informative Inherited
Biological Process (BP) neuron development 1 Highly Informative Inherited
Biological Process (BP) plasma membrane bounded cell projection organization 0.5469 Highly Informative Inherited
Biological Process (BP) positive regulation of cell development 0.001577 Highly Informative Inherited
Biological Process (BP) negative regulation of nervous system development 0.2014 Highly Informative Inherited
Biological Process (BP) viral process 0.003872 Highly Informative Inherited
Biological Process (BP) gliogenesis 0.1209 Highly Informative Inherited
Biological Process (BP) anatomical structure homeostasis 0.02023 Highly Informative Inherited
Biological Process (BP) negative regulation of growth 1 Highly Informative Inherited
Biological Process (BP) regulation of cellular response to stress 0.2509 Highly Informative Inherited
Biological Process (BP) regulation of protein catabolic process 0.1411 Highly Informative Inherited
Biological Process (BP) positive regulation of hydrolase activity 0.01519 Highly Informative Inherited
Biological Process (BP) regulation of circadian rhythm 0.6391 Highly Informative Inherited
Biological Process (BP) sensory organ morphogenesis 0.1503 Highly Informative Inherited
Biological Process (BP) response to nutrient levels 0.003234 Highly Informative Inherited
Biological Process (BP) regulation of developmental growth 0.4876 Highly Informative Inherited
Biological Process (BP) positive regulation of growth 0.07325 Highly Informative Inherited
Biological Process (BP) glycerophospholipid biosynthetic process 0.2163 Highly Informative Inherited
Biological Process (BP) appendage development 0.3125 Highly Informative Inherited
Biological Process (BP) spermatogenesis 1 Highly Informative Inherited
Biological Process (BP) protein-DNA complex subunit organization 0.3878 Highly Informative Inherited
Biological Process (BP) nucleus organization 0.1442 Highly Informative Inherited
Biological Process (BP) negative regulation of intracellular signal transduction 0.006142 Highly Informative Inherited
Biological Process (BP) positive regulation of cell cycle process 0.7307 Highly Informative Inherited
Biological Process (BP) positive regulation of organelle organization 0.3416 Highly Informative Inherited
Biological Process (BP) positive regulation of homeostatic process 0.6595 Highly Informative Inherited
Biological Process (BP) germ cell development 0.002365 Highly Informative Inherited
Biological Process (BP) forebrain development 0.907 Highly Informative Inherited
Biological Process (BP) icosanoid metabolic process 0.2184 Highly Informative Inherited
Biological Process (BP) fatty acid derivative biosynthetic process 0.1058 Highly Informative Inherited
Biological Process (BP) protein modification by small protein conjugation 0.1025 Highly Informative Inherited
Biological Process (BP) anatomical structure maturation 0.439 Highly Informative Inherited
Biological Process (BP) cell maturation 0.6705 Highly Informative Inherited
Biological Process (BP) negative regulation of catabolic process 0.004493 Highly Informative Inherited
Biological Process (BP) regulation of autophagy 0.009665 Highly Informative Inherited
Biological Process (BP) cellular protein catabolic process 0.001082 Highly Informative Inherited
Biological Process (BP) aging 0.001243 Highly Informative Inherited
Biological Process (BP) protein maturation 0.004458 Highly Informative Inherited
Biological Process (BP) peptidyl-lysine modification 0.2107 Highly Informative Inherited
Biological Process (BP) locomotory behavior 0.02845 Highly Informative Inherited
Biological Process (BP) secondary metabolite biosynthetic process 1 Highly Informative Inherited
Biological Process (BP) single-organism behavior 0.003494 Highly Informative Inherited
Biological Process (BP) nervous system process 0.0139 Highly Informative Inherited
Biological Process (BP) female gamete generation 0.9344 Highly Informative Inherited
Biological Process (BP) modification-dependent macromolecule catabolic process 1 Highly Informative Inherited
Biological Process (BP) nuclear export 1 Highly Informative Inherited
Biological Process (BP) heart development 0.455 Highly Informative Inherited
Biological Process (BP) regulation of production of molecular mediator of immune response 0.01502 Highly Informative Inherited
Biological Process (BP) regulation of humoral immune response 0.003531 Highly Informative Inherited
Molecular Function (MF) binding 0 Least Informative Direct
Molecular Function (MF) hydrolase activity 1 Least Informative Inherited
Molecular Function (MF) transferase activity 1 Least Informative Inherited
Molecular Function (MF) molecular function regulator 0.00000000000107 Moderately Informative Direct
Molecular Function (MF) transporter activity 1 Moderately Informative Inherited
Molecular Function (MF) transferase activity, transferring phosphorus-containing groups 0.4048 Moderately Informative Inherited
Molecular Function (MF) oxidoreductase activity 1 Moderately Informative Inherited
Molecular Function (MF) metal ion binding 1 Moderately Informative Inherited
Molecular Function (MF) nucleic acid binding 0.6631 Moderately Informative Inherited
Molecular Function (MF) RNA binding 0.0000000000000123 Informative Direct
Molecular Function (MF) cytoskeletal protein binding 0.0001637 Informative Direct
Molecular Function (MF) peptidase activity, acting on L-amino acid peptides 0.0003229 Informative Direct
Molecular Function (MF) zinc ion binding 0.0003843 Informative Direct
Molecular Function (MF) receptor binding 1 Informative Inherited
Molecular Function (MF) kinase activity 0.00842 Informative Inherited
Molecular Function (MF) phosphotransferase activity, alcohol group as acceptor 0.002739 Informative Inherited
Molecular Function (MF) passive transmembrane transporter activity 1 Informative Inherited
Molecular Function (MF) metal ion transmembrane transporter activity 1 Informative Inherited
Molecular Function (MF) signal transducer activity 1 Informative Inherited
Molecular Function (MF) enzyme binding 0.407 Informative Inherited
Molecular Function (MF) molecular transducer activity 1 Informative Inherited
Molecular Function (MF) amide binding 0.4949 Informative Inherited
Molecular Function (MF) phosphatase regulator activity 0.00000000982 Highly Informative Direct
Molecular Function (MF) protein transporter activity 0 Highly Informative Direct
Molecular Function (MF) exopeptidase activity 0 Highly Informative Direct
Molecular Function (MF) ubiquitin-like protein transferase activity 0.0000000002049 Highly Informative Direct
Molecular Function (MF) small GTPase binding 0.000000002961 Highly Informative Direct
Molecular Function (MF) translation factor activity, RNA binding 0.00000005165 Highly Informative Direct
Molecular Function (MF) tubulin binding 0.0001918 Highly Informative Direct
Molecular Function (MF) protein domain specific binding 1 Highly Informative Inherited
Molecular Function (MF) cell adhesion molecule binding 0.001488 Highly Informative Inherited
Molecular Function (MF) monooxygenase activity 0.36 Highly Informative Inherited
Molecular Function (MF) oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxyge 0.7353 Highly Informative Inherited
Molecular Function (MF) transmembrane signaling receptor activity 1 Highly Informative Inherited
Molecular Function (MF) gated channel activity 1 Highly Informative Inherited
Molecular Function (MF) ion channel activity 1 Highly Informative Inherited
Molecular Function (MF) peptide binding 0.02597 Highly Informative Inherited
Cellular Component (CC) non-membrane-bounded organelle 0.00000000000001166 Least Informative Direct
Cellular Component (CC) intracellular organelle part 0.00000007484 Least Informative Direct
Cellular Component (CC) protein complex 0.0000000000002384 Least Informative Direct
Cellular Component (CC) cytoplasmic part 1 Least Informative Inherited
Cellular Component (CC) intracellular membrane-bounded organelle 0.7407 Least Informative Inherited
Cellular Component (CC) membrane 0.6105 Least Informative Inherited
Cellular Component (CC) nuclear part 0.00000000002171 Moderately Informative Direct
Cellular Component (CC) whole membrane 0.0000000000002028 Moderately Informative Direct
Cellular Component (CC) cytoskeleton 0.0007004 Moderately Informative Direct
Cellular Component (CC) bounding membrane of organelle 0.000000005944 Moderately Informative Direct
Cellular Component (CC) endomembrane system 0.000000000518 Moderately Informative Direct
Cellular Component (CC) cell projection 0.2495 Moderately Informative Inherited
Cellular Component (CC) transferase complex 0.08704 Moderately Informative Inherited
Cellular Component (CC) intracellular organelle lumen 0.04198 Moderately Informative Inherited
Cellular Component (CC) cytosolic part 1 Moderately Informative Inherited
Cellular Component (CC) membrane protein complex 0.001725 Moderately Informative Inherited
Cellular Component (CC) plasma membrane 1 Moderately Informative Inherited
Cellular Component (CC) vesicle 0.04946 Moderately Informative Inherited
Cellular Component (CC) microtubule cytoskeleton 0.000000003407 Informative Direct
Cellular Component (CC) nuclear envelope 0.000000000002044 Informative Direct
Cellular Component (CC) cytoplasmic region 0.00008828 Informative Direct
Cellular Component (CC) Golgi apparatus 0.0000000000002205 Informative Direct
Cellular Component (CC) extrinsic component of membrane 0 Informative Direct
Cellular Component (CC) cytoplasmic vesicle part 0.00000007451 Informative Direct
Cellular Component (CC) plasma membrane protein complex 0.0000004961 Informative Direct
Cellular Component (CC) supramolecular polymer 0.000659 Informative Direct
Cellular Component (CC) secretory granule 0.822 Informative Inherited
Cellular Component (CC) side of membrane 0.01498 Informative Inherited
Cellular Component (CC) plasma membrane bounded cell projection part 0.7109 Informative Inherited
Cellular Component (CC) cilium 0.5762 Informative Inherited
Cellular Component (CC) nucleoplasm part 1 Informative Inherited
Cellular Component (CC) neuron projection 0.9447 Informative Inherited
Cellular Component (CC) transferase complex, transferring phosphorus-containing groups 0.002577 Informative Inherited
Cellular Component (CC) ubiquitin ligase complex 0.6193 Informative Inherited
Cellular Component (CC) membrane region 0.02552 Informative Inherited
Cellular Component (CC) chromosome 0.003514 Informative Inherited
Cellular Component (CC) protein serine/threonine phosphatase complex 0 Highly Informative Direct
Cellular Component (CC) CCR4-NOT complex 0.0004348 Highly Informative Direct
Cellular Component (CC) nuclear pore 0 Highly Informative Direct
Cellular Component (CC) cell-cell junction 0.00006422 Highly Informative Direct
Cellular Component (CC) perinuclear region of cytoplasm 0.000003099 Highly Informative Direct
Cellular Component (CC) membrane coat 0 Highly Informative Direct
Cellular Component (CC) coated vesicle 0.00000000000002829 Highly Informative Direct
Cellular Component (CC) Golgi-associated vesicle 0.000000002726 Highly Informative Direct
Cellular Component (CC) spindle 0.0000001369 Highly Informative Direct
Cellular Component (CC) midbody 0.000002024 Highly Informative Direct
Cellular Component (CC) Golgi subcompartment 0.000007873 Highly Informative Direct
Cellular Component (CC) kinetochore 0.0001325 Highly Informative Direct
Cellular Component (CC) cytoplasmic microtubule 0.0001423 Highly Informative Direct
Cellular Component (CC) peptidase complex 0.0002101 Highly Informative Direct
Cellular Component (CC) symplast 0.0003705 Highly Informative Direct
Cellular Component (CC) cytoplasmic vesicle membrane 0.000601 Highly Informative Direct
Cellular Component (CC) RNA polymerase II transcription factor complex 0.227 Highly Informative Inherited
Cellular Component (CC) endocytic vesicle 0.03809 Highly Informative Inherited
Cellular Component (CC) basal part of cell 0.1361 Highly Informative Inherited
Cellular Component (CC) growth cone 0.09149 Highly Informative Inherited
Cellular Component (CC) microtubule organizing center 0.003406 Highly Informative Inherited
Cellular Component (CC) nuclear chromosome part 0.7992 Highly Informative Inherited

Document: GO annotation of SCOP domains

Enzyme Commission (EC)

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