SUPERFAMILY 1.75 HMM library and genome assignments server

Please note: Superfamily is currently under maintenance and some functionality may be limited. Please bear with us as we fix these problems.


PH domain-like superfamily

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All beta proteins [ 48724] (174)
Fold:   PH domain-like barrel [ 50728] (2)
Superfamily:   PH domain-like [ 50729] (13)
Families:   Pleckstrin-homology domain (PH domain) [ 50730] (47)
  Phosphotyrosine-binding domain (PTB) [ 50755] (12)
  Ran-binding domain [ 50764] (4)
  Enabled/VASP homology 1 domain (EVH1 domain) [ 50767] (6)
  Dcp1 [ 101836]
  Third domain of FERM [ 50776] (8)
  PreBEACH PH-like domain [ 82146] (2)
  GRAM domain [ 101839]
  TFIIH domain [ 110272] (2)
  SSRP1-like [ 141436]
  Necap1 N-terminal domain-like [ 141439]
  VPS36 N-terminal domain-like [ 141442]
  BPHL domain [ 159216] (2)


Superfamily statistics
Genomes (913) Uniprot 2014_06 PDB chains (SCOP 1.75)
Domains 73,136 80,177 146
Proteins 65,156 71,522 145


Functional annotation
General category Regulation
Detailed category Signal transduction

Document:
Function annotation of SCOP domain superfamilies

Gene Ontology (high-quality)

(show details)
GO termFDR (singleton)FDR (all)SDFO levelAnnotation (direct or inherited)
Biological Process (BP)multicellular organismal process0.00021520Least InformativeDirect
Biological Process (BP)developmental process0.000019790Least InformativeDirect
Biological Process (BP)single-organism cellular process0.0000002510Least InformativeDirect
Biological Process (BP)cellular component organization or biogenesis0.000016030Least InformativeDirect
Biological Process (BP)response to stimulus0.0079650Least InformativeInherited
Biological Process (BP)localization0.11530Least InformativeInherited
Biological Process (BP)regulation of cellular process0.012140.0000003827Least InformativeInherited
Biological Process (BP)regulation of metabolic process0.76221Least InformativeInherited
Biological Process (BP)protein metabolic process0.40191Least InformativeInherited
Biological Process (BP)cellular macromolecule metabolic process0.55911Least InformativeInherited
Biological Process (BP)macromolecule localization0.00023240.0002262Moderately InformativeDirect
Biological Process (BP)regulation of catalytic activity0.00054540Moderately InformativeDirect
Biological Process (BP)cellular response to chemical stimulus0.6740.8307Moderately InformativeInherited
Biological Process (BP)positive regulation of response to stimulus0.79131Moderately InformativeInherited
Biological Process (BP)positive regulation of cellular process0.00081870.4465Moderately InformativeInherited
Biological Process (BP)regulation of cellular component organization0.48160Moderately InformativeInherited
Biological Process (BP)positive regulation of molecular function0.12590Moderately InformativeInherited
Biological Process (BP)response to oxygen-containing compound0.090530.1276Moderately InformativeInherited
Biological Process (BP)response to endogenous stimulus0.14860.1471Moderately InformativeInherited
Biological Process (BP)response to organic substance0.35930.006088Moderately InformativeInherited
Biological Process (BP)cellular localization0.0075430.00000000000002793Moderately InformativeInherited
Biological Process (BP)regulation of phosphate metabolic process10Moderately InformativeInherited
Biological Process (BP)regulation of nucleobase-containing compound metabolic process0.92670.01795Moderately InformativeInherited
Biological Process (BP)regulation of signal transduction0.0041870Moderately InformativeInherited
Biological Process (BP)regulation of biological quality0.047120.0000000000358Moderately InformativeInherited
Biological Process (BP)cell differentiation0.0000046211Moderately InformativeInherited
Biological Process (BP)system process0.060.0001186Moderately InformativeInherited
Biological Process (BP)regulation of developmental process0.050260.00009788Moderately InformativeInherited
Biological Process (BP)regulation of multicellular organismal process0.33451Moderately InformativeInherited
Biological Process (BP)organelle organization0.53650.00000004222Moderately InformativeInherited
Biological Process (BP)regulation of localization0.019230.00003555Moderately InformativeInherited
Biological Process (BP)nervous system development0.02250.000000209Moderately InformativeInherited
Biological Process (BP)signal transduction0.025950Moderately InformativeInherited
Biological Process (BP)cellular protein modification process0.038220.01167Moderately InformativeInherited
Biological Process (BP)phosphate-containing compound metabolic process0.053920.000000000000003755Moderately InformativeInherited
Biological Process (BP)enzyme linked receptor protein signaling pathway0.000740InformativeDirect
Biological Process (BP)regulation of nucleoside metabolic process0.0002310InformativeDirect
Biological Process (BP)response to organonitrogen compound0.00043670.0000001049InformativeDirect
Biological Process (BP)cellular membrane organization0.00034340.00002298InformativeDirect
Biological Process (BP)cell projection organization0.00011140InformativeDirect
Biological Process (BP)cellular response to endogenous stimulus0.0009120.0001798InformativeDirect
Biological Process (BP)regulation of purine nucleotide metabolic process0.00036160InformativeDirect
Biological Process (BP)cellular response to nitrogen compound0.000023690.0000004027InformativeDirect
Biological Process (BP)cellular response to oxygen-containing compound0.0029270.02638InformativeInherited
Biological Process (BP)response to hormone stimulus0.0025530.2371InformativeInherited
Biological Process (BP)regulation of organelle organization0.13420InformativeInherited
Biological Process (BP)positive regulation of cellular component organization0.045150InformativeInherited
Biological Process (BP)regulation of cellular catabolic process0.015830InformativeInherited
Biological Process (BP)positive regulation of hydrolase activity0.14370InformativeInherited
Biological Process (BP)regulation of cellular component biogenesis0.032970InformativeInherited
Biological Process (BP)positive regulation of developmental process0.057220.354InformativeInherited
Biological Process (BP)regulation of anatomical structure morphogenesis0.26140InformativeInherited
Biological Process (BP)regulation of anatomical structure size0.033860.000000000000009148InformativeInherited
Biological Process (BP)cytoskeleton organization0.021370InformativeInherited
Biological Process (BP)actin filament-based process0.0094280InformativeInherited
Biological Process (BP)phosphorylation0.0020820.0402InformativeInherited
Biological Process (BP)protein phosphorylation0.000048310Highly InformativeDirect
Biological Process (BP)transmembrane receptor protein tyrosine kinase signaling pathway0.000000052620.0000000000003836Highly InformativeDirect
Biological Process (BP)regulation of Ras GTPase activity0.0000010830.000000000000007347Highly InformativeDirect
Biological Process (BP)regulation of actin cytoskeleton organization0.000017410.0000002413Highly InformativeDirect
Biological Process (BP)cell junction organization0.000002060.0000000002784Highly InformativeDirect
Biological Process (BP)response to peptide hormone stimulus0.0000057480Highly InformativeDirect
Biological Process (BP)positive regulation of GTPase activity0.000019950Highly InformativeDirect
Biological Process (BP)neural precursor cell proliferation0.000000025890.0000778Highly InformativeDirect
Biological Process (BP)stem cell proliferation0.000000022250.0003902Highly InformativeDirect
Biological Process (BP)regulation of cellular response to insulin stimulus0.0000014630.0003256Highly InformativeDirect
Biological Process (BP)cellular response to peptide0.00000048810Highly InformativeDirect
Biological Process (BP)regulation of glucose import0.000000011420.01227Highly InformativeInherited
Biological Process (BP)positive regulation of organelle organization0.018130.0000000000002131Highly InformativeInherited
Biological Process (BP)glial cell differentiation0.000056070.8Highly InformativeInherited
Biological Process (BP)regulation of membrane potential0.000079091Highly InformativeInherited
Biological Process (BP)regulation of protein complex assembly0.00041630.001012Highly InformativeInherited
Biological Process (BP)regulation of epithelial cell differentiation0.00035441Highly InformativeInherited
Biological Process (BP)regulation of organ morphogenesis0.00019091Highly InformativeInherited
Molecular Function (MF)binding0.00016470Least InformativeDirect
Molecular Function (MF)transferase activity0.39111Least InformativeInherited
Molecular Function (MF)anion binding0.017330Moderately InformativeInherited
Molecular Function (MF)transferase activity, transferring phosphorus-containing groups0.0050690.000000007873Moderately InformativeInherited
Molecular Function (MF)phosphotransferase activity, alcohol group as acceptor0.00032470.000000000001669InformativeDirect
Molecular Function (MF)lipid binding0.0031110InformativeInherited
Molecular Function (MF)kinase activity0.00170.00000000000006352InformativeInherited
Molecular Function (MF)protein kinase activity0.000055260.0000000004214Highly InformativeDirect
Molecular Function (MF)phosphatidylinositol binding0.000000005550.00000000005424Highly InformativeDirect
Cellular Component (CC)intracellular organelle part0.47721Least InformativeInherited
Cellular Component (CC)intracellular non-membrane-bounded organelle0.0026460Least InformativeInherited
Cellular Component (CC)cytoplasmic part0.75250.00008018Least InformativeInherited
Cellular Component (CC)membrane0.033220Least InformativeInherited
Cellular Component (CC)cell projection0.00014840Moderately InformativeDirect
Cellular Component (CC)cytoskeleton0.0052960Moderately InformativeInherited
Cellular Component (CC)plasma membrane0.010690Moderately InformativeInherited
Cellular Component (CC)cell cortex0.000003510InformativeDirect
Cellular Component (CC)cell leading edge0.000011990InformativeDirect
Cellular Component (CC)actin cytoskeleton0.20750.0000000000001566InformativeInherited
Cellular Component (CC)apical plasma membrane0.000049180.00000000003881Highly InformativeDirect
Cellular Component (CC)extrinsic to plasma membrane0.000083310.000000000335Highly InformativeDirect
Cellular Component (CC)cortical cytoskeleton0.000019250.00000000001998Highly InformativeDirect

Document: GO annotation of SCOP domains

Gene Ontology (high-coverage)

(show details)
GO term FDR (all) SDFO level Annotation (direct or inherited)
Biological Process (BP) multicellular organismal process 0 Least Informative Direct
Biological Process (BP) developmental process 0 Least Informative Direct
Biological Process (BP) single-organism cellular process 0 Least Informative Direct
Biological Process (BP) regulation of cellular process 0.0000003827 Least Informative Direct
Biological Process (BP) response to stimulus 0 Least Informative Direct
Biological Process (BP) localization 0 Least Informative Direct
Biological Process (BP) cellular component organization or biogenesis 0 Least Informative Direct
Biological Process (BP) single-organism metabolic process 1 Least Informative Inherited
Biological Process (BP) biosynthetic process 1 Least Informative Inherited
Biological Process (BP) cellular aromatic compound metabolic process 1 Least Informative Inherited
Biological Process (BP) organic cyclic compound metabolic process 1 Least Informative Inherited
Biological Process (BP) regulation of metabolic process 1 Least Informative Inherited
Biological Process (BP) cellular macromolecule metabolic process 1 Least Informative Inherited
Biological Process (BP) protein metabolic process 1 Least Informative Inherited
Biological Process (BP) immune system process 0.00000002472 Moderately Informative Direct
Biological Process (BP) system process 0.0001186 Moderately Informative Direct
Biological Process (BP) phosphate-containing compound metabolic process 0.000000000000003755 Moderately Informative Direct
Biological Process (BP) organelle organization 0.00000004222 Moderately Informative Direct
Biological Process (BP) signal transduction 0 Moderately Informative Direct
Biological Process (BP) nervous system development 0.000000209 Moderately Informative Direct
Biological Process (BP) anatomical structure morphogenesis 0.00000000711 Moderately Informative Direct
Biological Process (BP) regulation of signal transduction 0 Moderately Informative Direct
Biological Process (BP) regulation of phosphate metabolic process 0 Moderately Informative Direct
Biological Process (BP) regulation of localization 0.00003555 Moderately Informative Direct
Biological Process (BP) macromolecule localization 0.0002262 Moderately Informative Direct
Biological Process (BP) positive regulation of molecular function 0 Moderately Informative Direct
Biological Process (BP) regulation of catalytic activity 0 Moderately Informative Direct
Biological Process (BP) regulation of developmental process 0.00009788 Moderately Informative Direct
Biological Process (BP) regulation of cellular component organization 0 Moderately Informative Direct
Biological Process (BP) cellular localization 0.00000000000002793 Moderately Informative Direct
Biological Process (BP) regulation of biological quality 0.0000000000358 Moderately Informative Direct
Biological Process (BP) cellular response to chemical stimulus 0.8307 Moderately Informative Inherited
Biological Process (BP) positive regulation of response to stimulus 1 Moderately Informative Inherited
Biological Process (BP) organophosphate metabolic process 0.008881 Moderately Informative Inherited
Biological Process (BP) ion transport 1 Moderately Informative Inherited
Biological Process (BP) negative regulation of cellular process 1 Moderately Informative Inherited
Biological Process (BP) macromolecular complex subunit organization 1 Moderately Informative Inherited
Biological Process (BP) tissue development 1 Moderately Informative Inherited
Biological Process (BP) lipid metabolic process 0.08289 Moderately Informative Inherited
Biological Process (BP) carbohydrate metabolic process 1 Moderately Informative Inherited
Biological Process (BP) organic substance catabolic process 1 Moderately Informative Inherited
Biological Process (BP) organic hydroxy compound metabolic process 0.3471 Moderately Informative Inherited
Biological Process (BP) response to organic substance 0.006088 Moderately Informative Inherited
Biological Process (BP) response to oxygen-containing compound 0.1276 Moderately Informative Inherited
Biological Process (BP) response to endogenous stimulus 0.1471 Moderately Informative Inherited
Biological Process (BP) positive regulation of metabolic process 1 Moderately Informative Inherited
Biological Process (BP) multi-organism process 1 Moderately Informative Inherited
Biological Process (BP) regulation of nucleobase-containing compound metabolic process 0.01795 Moderately Informative Inherited
Biological Process (BP) regulation of protein metabolic process 1 Moderately Informative Inherited
Biological Process (BP) negative regulation of metabolic process 1 Moderately Informative Inherited
Biological Process (BP) positive regulation of cellular process 0.4465 Moderately Informative Inherited
Biological Process (BP) cell differentiation 1 Moderately Informative Inherited
Biological Process (BP) cellular component biogenesis 1 Moderately Informative Inherited
Biological Process (BP) organic substance transport 1 Moderately Informative Inherited
Biological Process (BP) regulation of macromolecule biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) regulation of cellular biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) regulation of multicellular organismal process 1 Moderately Informative Inherited
Biological Process (BP) cellular response to stress 1 Moderately Informative Inherited
Biological Process (BP) reproduction 0.3233 Moderately Informative Inherited
Biological Process (BP) cellular protein modification process 0.01167 Moderately Informative Inherited
Biological Process (BP) organ development 1 Moderately Informative Inherited
Biological Process (BP) cellular catabolic process 1 Moderately Informative Inherited
Biological Process (BP) phospholipid metabolic process 0.000000000006272 Informative Direct
Biological Process (BP) cellular component movement 0.0000000000000161 Informative Direct
Biological Process (BP) cytoskeleton organization 0 Informative Direct
Biological Process (BP) enzyme linked receptor protein signaling pathway 0 Informative Direct
Biological Process (BP) synaptic transmission 0.0000108 Informative Direct
Biological Process (BP) regulation of nucleoside metabolic process 0 Informative Direct
Biological Process (BP) response to wounding 0.0001566 Informative Direct
Biological Process (BP) response to organonitrogen compound 0.0000001049 Informative Direct
Biological Process (BP) protein transport 0.0006753 Informative Direct
Biological Process (BP) cellular membrane organization 0.00002298 Informative Direct
Biological Process (BP) vesicle-mediated transport 0 Informative Direct
Biological Process (BP) dephosphorylation 0.00000983 Informative Direct
Biological Process (BP) regulation of anatomical structure morphogenesis 0 Informative Direct
Biological Process (BP) biological adhesion 0.0000001102 Informative Direct
Biological Process (BP) actin filament-based process 0 Informative Direct
Biological Process (BP) cell projection organization 0 Informative Direct
Biological Process (BP) regulation of cellular catabolic process 0 Informative Direct
Biological Process (BP) cellular component morphogenesis 0.00001368 Informative Direct
Biological Process (BP) regulation of organelle organization 0 Informative Direct
Biological Process (BP) intracellular signal transduction 0 Informative Direct
Biological Process (BP) locomotion 0 Informative Direct
Biological Process (BP) regulation of locomotion 0.0000001248 Informative Direct
Biological Process (BP) regulation of cellular component biogenesis 0 Informative Direct
Biological Process (BP) glycerolipid metabolic process 0 Informative Direct
Biological Process (BP) generation of neurons 0.0002529 Informative Direct
Biological Process (BP) positive regulation of transport 0.00002396 Informative Direct
Biological Process (BP) negative regulation of cellular component organization 0.00000007153 Informative Direct
Biological Process (BP) positive regulation of cellular component organization 0 Informative Direct
Biological Process (BP) positive regulation of protein metabolic process 0.00004543 Informative Direct
Biological Process (BP) positive regulation of hydrolase activity 0 Informative Direct
Biological Process (BP) localization of cell 0.000000000005691 Informative Direct
Biological Process (BP) regulation of nervous system development 0 Informative Direct
Biological Process (BP) regulation of cell development 0.00000000000008316 Informative Direct
Biological Process (BP) regulation of vesicle-mediated transport 0.00000003704 Informative Direct
Biological Process (BP) cellular response to endogenous stimulus 0.0001798 Informative Direct
Biological Process (BP) regulation of anatomical structure size 0.000000000000009148 Informative Direct
Biological Process (BP) regulation of purine nucleotide metabolic process 0 Informative Direct
Biological Process (BP) cellular response to nitrogen compound 0.0000004027 Informative Direct
Biological Process (BP) regulation of ion transport 0.7729 Informative Inherited
Biological Process (BP) cellular response to oxygen-containing compound 0.02638 Informative Inherited
Biological Process (BP) apoptotic process 0.02541 Informative Inherited
Biological Process (BP) regulation of protein localization 0.8306 Informative Inherited
Biological Process (BP) regulation of intracellular transport 0.7892 Informative Inherited
Biological Process (BP) organ morphogenesis 0.5404 Informative Inherited
Biological Process (BP) growth 0.5128 Informative Inherited
Biological Process (BP) regulation of lipid metabolic process 1 Informative Inherited
Biological Process (BP) regulation of kinase activity 0.1962 Informative Inherited
Biological Process (BP) regulation of apoptotic signaling pathway 1 Informative Inherited
Biological Process (BP) organophosphate catabolic process 0.02421 Informative Inherited
Biological Process (BP) response to hormone stimulus 0.2371 Informative Inherited
Biological Process (BP) response to cytokine stimulus 0.5323 Informative Inherited
Biological Process (BP) embryo development ending in birth or egg hatching 0.6646 Informative Inherited
Biological Process (BP) embryonic organ development 1 Informative Inherited
Biological Process (BP) cardiovascular system development 1 Informative Inherited
Biological Process (BP) metal ion transport 1 Informative Inherited
Biological Process (BP) negative regulation of developmental process 0.7058 Informative Inherited
Biological Process (BP) cation homeostasis 1 Informative Inherited
Biological Process (BP) cellular chemical homeostasis 1 Informative Inherited
Biological Process (BP) negative regulation of catalytic activity 1 Informative Inherited
Biological Process (BP) sensory organ development 1 Informative Inherited
Biological Process (BP) tissue morphogenesis 0.352 Informative Inherited
Biological Process (BP) mitochondrion organization 1 Informative Inherited
Biological Process (BP) cellular carbohydrate metabolic process 1 Informative Inherited
Biological Process (BP) positive regulation of multicellular organismal process 1 Informative Inherited
Biological Process (BP) regulation of cell cycle process 0.9327 Informative Inherited
Biological Process (BP) alcohol metabolic process 0.4907 Informative Inherited
Biological Process (BP) single-organism behavior 1 Informative Inherited
Biological Process (BP) negative regulation of cell communication 0.03259 Informative Inherited
Biological Process (BP) negative regulation of signaling 0.01037 Informative Inherited
Biological Process (BP) negative regulation of response to stimulus 0.1971 Informative Inherited
Biological Process (BP) regulation of immune response 1 Informative Inherited
Biological Process (BP) negative regulation of immune system process 1 Informative Inherited
Biological Process (BP) negative regulation of transport 0.01861 Informative Inherited
Biological Process (BP) regulation of secretion 1 Informative Inherited
Biological Process (BP) regulation of immune effector process 0.9682 Informative Inherited
Biological Process (BP) regulation of cell activation 1 Informative Inherited
Biological Process (BP) peptidyl-amino acid modification 0.001601 Informative Inherited
Biological Process (BP) positive regulation of phosphate metabolic process 1 Informative Inherited
Biological Process (BP) regulation of intracellular protein kinase cascade 1 Informative Inherited
Biological Process (BP) regulation of protein phosphorylation 0.03513 Informative Inherited
Biological Process (BP) response to organic cyclic compound 1 Informative Inherited
Biological Process (BP) protein localization to organelle 1 Informative Inherited
Biological Process (BP) nitrogen compound transport 1 Informative Inherited
Biological Process (BP) chromosome organization 1 Informative Inherited
Biological Process (BP) positive regulation of signal transduction 1 Informative Inherited
Biological Process (BP) defense response 0.1183 Informative Inherited
Biological Process (BP) immune response 0.6419 Informative Inherited
Biological Process (BP) immune effector process 0.1834 Informative Inherited
Biological Process (BP) secondary metabolic process 1 Informative Inherited
Biological Process (BP) lipid localization 0.9494 Informative Inherited
Biological Process (BP) negative regulation of protein metabolic process 0.001175 Informative Inherited
Biological Process (BP) positive regulation of developmental process 0.354 Informative Inherited
Biological Process (BP) reproductive system development 1 Informative Inherited
Biological Process (BP) hematopoietic or lymphoid organ development 0.0461 Informative Inherited
Biological Process (BP) multi-multicellular organism process 0.4013 Informative Inherited
Biological Process (BP) phosphorylation 0.0402 Informative Inherited
Biological Process (BP) central nervous system development 0.7414 Informative Inherited
Biological Process (BP) organelle localization 0.005686 Informative Inherited
Biological Process (BP) secretion by cell 0.04405 Informative Inherited
Biological Process (BP) cellular macromolecular complex assembly 1 Informative Inherited
Biological Process (BP) muscle tissue development 0.3165 Informative Inherited
Biological Process (BP) regulation of system process 0.5943 Informative Inherited
Biological Process (BP) regulation of growth 0.03072 Informative Inherited
Biological Process (BP) regulation of body fluid levels 0.08728 Informative Inherited
Biological Process (BP) muscle structure development 0.9503 Informative Inherited
Biological Process (BP) embryonic morphogenesis 0.06295 Informative Inherited
Biological Process (BP) anatomical structure formation involved in morphogenesis 0.4298 Informative Inherited
Biological Process (BP) epithelium development 0.5425 Informative Inherited
Biological Process (BP) tube development 1 Informative Inherited
Biological Process (BP) multicellular organismal reproductive process 0.001698 Informative Inherited
Biological Process (BP) sexual reproduction 0.001195 Informative Inherited
Biological Process (BP) single organism reproductive process 1 Informative Inherited
Biological Process (BP) developmental process involved in reproduction 1 Informative Inherited
Biological Process (BP) cytoplasmic transport 1 Informative Inherited
Biological Process (BP) cell cycle process 1 Informative Inherited
Biological Process (BP) cellular process involved in reproduction 0.6364 Informative Inherited
Biological Process (BP) mitotic cell cycle 0.06733 Informative Inherited
Biological Process (BP) pigment metabolic process 0.07369 Informative Inherited
Biological Process (BP) leukocyte activation 0.7956 Informative Inherited
Biological Process (BP) response to nutrient levels 0.09531 Informative Inherited
Biological Process (BP) protein phosphorylation 0 Highly Informative Direct
Biological Process (BP) protein dephosphorylation 0.0000000005464 Highly Informative Direct
Biological Process (BP) phagocytosis 0.00000002164 Highly Informative Direct
Biological Process (BP) chemotaxis 0.0000000000004176 Highly Informative Direct
Biological Process (BP) actin filament organization 0.0001455 Highly Informative Direct
Biological Process (BP) establishment or maintenance of cell polarity 0.00000000007045 Highly Informative Direct
Biological Process (BP) transmembrane receptor protein tyrosine kinase signaling pathway 0.0000000000003836 Highly Informative Direct
Biological Process (BP) small GTPase mediated signal transduction 0 Highly Informative Direct
Biological Process (BP) hemostasis 0.000000000006962 Highly Informative Direct
Biological Process (BP) positive regulation of organelle organization 0.0000000000002131 Highly Informative Direct
Biological Process (BP) regulation of cell morphogenesis involved in differentiation 0.0004253 Highly Informative Direct
Biological Process (BP) vesicle organization 0.000324 Highly Informative Direct
Biological Process (BP) regulation of striated muscle tissue development 0.000002742 Highly Informative Direct
Biological Process (BP) regulation of exocytosis 0.000002063 Highly Informative Direct
Biological Process (BP) cellular process involved in reproduction in multicellular organism 0.00005613 Highly Informative Direct
Biological Process (BP) cell projection assembly 0.000003331 Highly Informative Direct
Biological Process (BP) regulation of cell adhesion 0.000000006067 Highly Informative Direct
Biological Process (BP) lipid modification 0.00005451 Highly Informative Direct
Biological Process (BP) adult behavior 0.0005306 Highly Informative Direct
Biological Process (BP) cytoskeleton-dependent intracellular transport 0.0004147 Highly Informative Direct
Biological Process (BP) regulation of Ras GTPase activity 0.000000000000007347 Highly Informative Direct
Biological Process (BP) regulation of actin cytoskeleton organization 0.0000002413 Highly Informative Direct
Biological Process (BP) cell junction organization 0.0000000002784 Highly Informative Direct
Biological Process (BP) protein localization to nucleus 0.0002785 Highly Informative Direct
Biological Process (BP) regulation of Rho protein signal transduction 0 Highly Informative Direct
Biological Process (BP) wound healing 0.0000008441 Highly Informative Direct
Biological Process (BP) positive regulation of programmed cell death 0.0000002126 Highly Informative Direct
Biological Process (BP) regulation of protein complex disassembly 0.000982 Highly Informative Direct
Biological Process (BP) response to peptide hormone stimulus 0 Highly Informative Direct
Biological Process (BP) positive regulation of GTPase activity 0 Highly Informative Direct
Biological Process (BP) protein targeting to nucleus 0.0001288 Highly Informative Direct
Biological Process (BP) innate immune response 0.0007856 Highly Informative Direct
Biological Process (BP) positive regulation of lipid metabolic process 0.0002759 Highly Informative Direct
Biological Process (BP) positive regulation of growth 0.000003959 Highly Informative Direct
Biological Process (BP) phosphatidylinositol metabolic process 0.000000001988 Highly Informative Direct
Biological Process (BP) post-embryonic organ development 0.00004963 Highly Informative Direct
Biological Process (BP) chemical homeostasis within a tissue 0.00001883 Highly Informative Direct
Biological Process (BP) coagulation 0.00001492 Highly Informative Direct
Biological Process (BP) leukocyte migration 0.00002436 Highly Informative Direct
Biological Process (BP) regulation of striated muscle cell differentiation 0.00000001201 Highly Informative Direct
Biological Process (BP) maintenance of location 0.00006721 Highly Informative Direct
Biological Process (BP) cell division 0.0001027 Highly Informative Direct
Biological Process (BP) neural precursor cell proliferation 0.0000778 Highly Informative Direct
Biological Process (BP) cellular response to growth factor stimulus 0 Highly Informative Direct
Biological Process (BP) stem cell proliferation 0.0003902 Highly Informative Direct
Biological Process (BP) regulation of cellular response to insulin stimulus 0.0003256 Highly Informative Direct
Biological Process (BP) cellular response to peptide 0 Highly Informative Direct
Biological Process (BP) regulation of ion homeostasis 0.0000004188 Highly Informative Direct
Biological Process (BP) regulation of glucose import 0.01227 Highly Informative Inherited
Biological Process (BP) negative regulation of apoptotic signaling pathway 0.2867 Highly Informative Inherited
Biological Process (BP) regulation of endocytosis 0.9647 Highly Informative Inherited
Biological Process (BP) regulation of transporter activity 0.8423 Highly Informative Inherited
Biological Process (BP) regulation of transmembrane transport 0.1244 Highly Informative Inherited
Biological Process (BP) regulation of protein ubiquitination 1 Highly Informative Inherited
Biological Process (BP) regulation of proteolysis 0.07298 Highly Informative Inherited
Biological Process (BP) regulation of protein catabolic process 1 Highly Informative Inherited
Biological Process (BP) positive regulation of catabolic process 1 Highly Informative Inherited
Biological Process (BP) positive regulation of intracellular transport 0.1459 Highly Informative Inherited
Biological Process (BP) regulation of intracellular protein transport 0.1022 Highly Informative Inherited
Biological Process (BP) cell growth 0.7356 Highly Informative Inherited
Biological Process (BP) developmental growth 1 Highly Informative Inherited
Biological Process (BP) regulation of mitochondrion organization 1 Highly Informative Inherited
Biological Process (BP) alcohol catabolic process 0.007528 Highly Informative Inherited
Biological Process (BP) placenta development 0.886 Highly Informative Inherited
Biological Process (BP) calcium ion transport 0.6271 Highly Informative Inherited
Biological Process (BP) cellular calcium ion homeostasis 0.04007 Highly Informative Inherited
Biological Process (BP) regulation of protein complex assembly 0.001012 Highly Informative Inherited
Biological Process (BP) sensory perception 1 Highly Informative Inherited
Biological Process (BP) regulation of neuron projection development 0.006744 Highly Informative Inherited
Biological Process (BP) negative regulation of cell differentiation 1 Highly Informative Inherited
Biological Process (BP) post-embryonic development 0.011 Highly Informative Inherited
Biological Process (BP) regulation of developmental growth 0.01532 Highly Informative Inherited
Biological Process (BP) response to alcohol 1 Highly Informative Inherited
Biological Process (BP) circadian rhythm 1 Highly Informative Inherited
Biological Process (BP) regulation of circadian rhythm 0.4514 Highly Informative Inherited
Biological Process (BP) regulation of behavior 1 Highly Informative Inherited
Biological Process (BP) regulation of cell size 1 Highly Informative Inherited
Biological Process (BP) regulation of G-protein coupled receptor protein signaling pathway 0.4967 Highly Informative Inherited
Biological Process (BP) polyol metabolic process 0.002065 Highly Informative Inherited
Biological Process (BP) negative regulation of leukocyte activation 0.2481 Highly Informative Inherited
Biological Process (BP) negative regulation of immune effector process 0.1339 Highly Informative Inherited
Biological Process (BP) negative regulation of secretion 1 Highly Informative Inherited
Biological Process (BP) positive regulation of protein kinase activity 0.7356 Highly Informative Inherited
Biological Process (BP) regulation of peptidyl-tyrosine phosphorylation 1 Highly Informative Inherited
Biological Process (BP) response to alkaloid 0.8895 Highly Informative Inherited
Biological Process (BP) myeloid cell development 0.2547 Highly Informative Inherited
Biological Process (BP) histone modification 1 Highly Informative Inherited
Biological Process (BP) respiratory system development 0.9676 Highly Informative Inherited
Biological Process (BP) regulation of membrane potential 1 Highly Informative Inherited
Biological Process (BP) cellular component assembly involved in morphogenesis 1 Highly Informative Inherited
Biological Process (BP) glial cell differentiation 0.8 Highly Informative Inherited
Biological Process (BP) regulation of binding 1 Highly Informative Inherited
Biological Process (BP) regulation of epithelial cell differentiation 1 Highly Informative Inherited
Biological Process (BP) regulation of organ morphogenesis 1 Highly Informative Inherited
Biological Process (BP) negative regulation of cytoskeleton organization 1 Highly Informative Inherited
Biological Process (BP) telencephalon development 0.1354 Highly Informative Inherited
Biological Process (BP) regulation of neurotransmitter levels 0.461 Highly Informative Inherited
Biological Process (BP) neurotransmitter transport 0.003727 Highly Informative Inherited
Biological Process (BP) exocytosis 0.01664 Highly Informative Inherited
Biological Process (BP) signal release 0.3084 Highly Informative Inherited
Biological Process (BP) establishment of synaptic vesicle localization 0.02667 Highly Informative Inherited
Biological Process (BP) muscle organ development 0.3052 Highly Informative Inherited
Biological Process (BP) regulation of cellular carbohydrate metabolic process 0.1163 Highly Informative Inherited
Biological Process (BP) negative regulation of multicellular organismal process 0.9422 Highly Informative Inherited
Biological Process (BP) limb morphogenesis 0.2045 Highly Informative Inherited
Biological Process (BP) branching morphogenesis of an epithelial tube 1 Highly Informative Inherited
Biological Process (BP) neuron projection development 0.9513 Highly Informative Inherited
Biological Process (BP) morphogenesis of embryonic epithelium 0.007404 Highly Informative Inherited
Biological Process (BP) fertilization 0.1803 Highly Informative Inherited
Biological Process (BP) female gamete generation 0.00806 Highly Informative Inherited
Biological Process (BP) MAPK cascade 1 Highly Informative Inherited
Biological Process (BP) stress-activated protein kinase signaling cascade 0.001342 Highly Informative Inherited
Biological Process (BP) G-protein coupled receptor signaling pathway 1 Highly Informative Inherited
Biological Process (BP) protein import 0.2097 Highly Informative Inherited
Biological Process (BP) nuclear import 0.0126 Highly Informative Inherited
Biological Process (BP) meiosis 1 Highly Informative Inherited
Biological Process (BP) mitosis 0.9874 Highly Informative Inherited
Biological Process (BP) mitotic cell cycle phase transition 1 Highly Informative Inherited
Biological Process (BP) phenol-containing compound metabolic process 0.00109 Highly Informative Inherited
Biological Process (BP) B cell activation 0.7356 Highly Informative Inherited
Biological Process (BP) T cell differentiation 0.2276 Highly Informative Inherited
Biological Process (BP) alpha-beta T cell activation 0.826 Highly Informative Inherited
Biological Process (BP) actomyosin structure organization 1 Highly Informative Inherited
Biological Process (BP) membrane fusion 1 Highly Informative Inherited
Biological Process (BP) autophagy 0.1687 Highly Informative Inherited
Biological Process (BP) cellular response to starvation 0.05996 Highly Informative Inherited
Biological Process (BP) organelle fusion 1 Highly Informative Inherited
Molecular Function (MF) binding 0 Least Informative Direct
Molecular Function (MF) transferase activity 1 Least Informative Inherited
Molecular Function (MF) hydrolase activity 1 Least Informative Inherited
Molecular Function (MF) transferase activity, transferring phosphorus-containing groups 0.000000007873 Moderately Informative Direct
Molecular Function (MF) hydrolase activity, acting on ester bonds 0.00000000000001334 Moderately Informative Direct
Molecular Function (MF) enzyme regulator activity 0 Moderately Informative Direct
Molecular Function (MF) anion binding 0 Moderately Informative Direct
Molecular Function (MF) transporter activity 1 Moderately Informative Inherited
Molecular Function (MF) receptor binding 0.0008129 Informative Direct
Molecular Function (MF) cytoskeletal protein binding 0 Informative Direct
Molecular Function (MF) lipid binding 0 Informative Direct
Molecular Function (MF) kinase activity 0.00000000000006352 Informative Direct
Molecular Function (MF) phosphotransferase activity, alcohol group as acceptor 0.000000000001669 Informative Direct
Molecular Function (MF) enzyme binding 0.000000000002277 Informative Direct
Molecular Function (MF) GTPase regulator activity 0 Informative Direct
Molecular Function (MF) phosphoric ester hydrolase activity 0 Informative Direct
Molecular Function (MF) nucleoside-triphosphatase activity 1 Informative Inherited
Molecular Function (MF) amide binding 1 Informative Inherited
Molecular Function (MF) protein kinase activity 0.0000000004214 Highly Informative Direct
Molecular Function (MF) small GTPase regulator activity 0.000005905 Highly Informative Direct
Molecular Function (MF) guanyl-nucleotide exchange factor activity 0 Highly Informative Direct
Molecular Function (MF) lipid transporter activity 0.00002675 Highly Informative Direct
Molecular Function (MF) steroid binding 0.00006853 Highly Informative Direct
Molecular Function (MF) phosphoric diester hydrolase activity 0.000001877 Highly Informative Direct
Molecular Function (MF) lipase activity 0.00000000000002611 Highly Informative Direct
Molecular Function (MF) protein domain specific binding 0 Highly Informative Direct
Molecular Function (MF) protein complex binding 0.000003349 Highly Informative Direct
Molecular Function (MF) phosphatidylinositol binding 0.00000000005424 Highly Informative Direct
Molecular Function (MF) alcohol binding 0.00000000009654 Highly Informative Direct
Molecular Function (MF) carbohydrate derivative transporter activity 0.03483 Highly Informative Inherited
Molecular Function (MF) Ras GTPase binding 1 Highly Informative Inherited
Molecular Function (MF) cytokine receptor binding 0.9488 Highly Informative Inherited
Molecular Function (MF) peptide binding 0.1387 Highly Informative Inherited
Cellular Component (CC) membrane 0 Least Informative Direct
Cellular Component (CC) intracellular non-membrane-bounded organelle 0 Least Informative Direct
Cellular Component (CC) cytoplasmic part 0.00008018 Least Informative Direct
Cellular Component (CC) protein complex 1 Least Informative Inherited
Cellular Component (CC) intracellular organelle part 1 Least Informative Inherited
Cellular Component (CC) intracellular membrane-bounded organelle 1 Least Informative Inherited
Cellular Component (CC) cytosol 0.000000002644 Moderately Informative Direct
Cellular Component (CC) cytoskeleton 0 Moderately Informative Direct
Cellular Component (CC) plasma membrane 0 Moderately Informative Direct
Cellular Component (CC) vesicle 0.0000000000009634 Moderately Informative Direct
Cellular Component (CC) cell projection 0 Moderately Informative Direct
Cellular Component (CC) endomembrane system 1 Moderately Informative Inherited
Cellular Component (CC) intrinsic to membrane 1 Moderately Informative Inherited
Cellular Component (CC) organelle membrane 1 Moderately Informative Inherited
Cellular Component (CC) nuclear part 1 Moderately Informative Inherited
Cellular Component (CC) intracellular organelle lumen 1 Moderately Informative Inherited
Cellular Component (CC) endoplasmic reticulum 1 Moderately Informative Inherited
Cellular Component (CC) organelle envelope 1 Moderately Informative Inherited
Cellular Component (CC) endosome 0.00000001045 Informative Direct
Cellular Component (CC) cell cortex 0 Informative Direct
Cellular Component (CC) actin cytoskeleton 0.0000000000001566 Informative Direct
Cellular Component (CC) cell junction 0 Informative Direct
Cellular Component (CC) cell leading edge 0 Informative Direct
Cellular Component (CC) contractile fiber part 0.0005746 Informative Direct
Cellular Component (CC) synapse part 0 Informative Direct
Cellular Component (CC) neuron projection 1 Informative Inherited
Cellular Component (CC) microtubule cytoskeleton 1 Informative Inherited
Cellular Component (CC) Golgi apparatus 0.7346 Informative Inherited
Cellular Component (CC) coated vesicle 1 Informative Inherited
Cellular Component (CC) integral to membrane 1 Informative Inherited
Cellular Component (CC) intrinsic to plasma membrane 1 Informative Inherited
Cellular Component (CC) nucleoplasm part 1 Informative Inherited
Cellular Component (CC) nuclear envelope 0.03299 Informative Inherited
Cellular Component (CC) vacuolar part 0.3076 Informative Inherited
Cellular Component (CC) adherens junction 0 Highly Informative Direct
Cellular Component (CC) apical plasma membrane 0.00000000003881 Highly Informative Direct
Cellular Component (CC) extrinsic to plasma membrane 0.000000000335 Highly Informative Direct
Cellular Component (CC) clathrin-coated vesicle 0.000392 Highly Informative Direct
Cellular Component (CC) cortical cytoskeleton 0.00000000001998 Highly Informative Direct
Cellular Component (CC) cell projection membrane 0.00009564 Highly Informative Direct
Cellular Component (CC) cell division site part 0 Highly Informative Direct
Cellular Component (CC) cell body 0.0000000000004612 Highly Informative Direct
Cellular Component (CC) pore complex 0.0001928 Highly Informative Direct
Cellular Component (CC) cilium part 0.0257 Highly Informative Inherited
Cellular Component (CC) centrosome 1 Highly Informative Inherited
Cellular Component (CC) spindle 1 Highly Informative Inherited
Cellular Component (CC) sarcomere 0.9373 Highly Informative Inherited
Cellular Component (CC) protein serine/threonine phosphatase complex 0.2611 Highly Informative Inherited
Cellular Component (CC) cytoplasmic vesicle membrane 0.67 Highly Informative Inherited
Cellular Component (CC) endocytic vesicle 0.849 Highly Informative Inherited
Cellular Component (CC) Golgi-associated vesicle 0.1098 Highly Informative Inherited
Cellular Component (CC) transport vesicle 0.821 Highly Informative Inherited
Cellular Component (CC) integral to plasma membrane 1 Highly Informative Inherited
Cellular Component (CC) ion channel complex 0.9157 Highly Informative Inherited
Cellular Component (CC) receptor complex 0.2646 Highly Informative Inherited
Cellular Component (CC) endosomal part 0.03674 Highly Informative Inherited

Document: GO annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Acting on ester bonds0Least InformativeDirect
Enzyme Commission (EC)Acting on acid anhydrides1Least InformativeInherited
Enzyme Commission (EC)Phosphoric diester hydrolases0Moderately InformativeDirect
Enzyme Commission (EC)Protein-serine/threonine kinases0Moderately InformativeDirect
Enzyme Commission (EC)Phosphoric monoester hydrolases0.05493Moderately InformativeInherited
Enzyme Commission (EC)Phosphotransferases with an alcohol group as accep1Moderately InformativeInherited
Enzyme Commission (EC)Glycosyltransferases0.02837Moderately InformativeInherited
Enzyme Commission (EC)Phosphoinositide phospholipase C0InformativeDirect
Enzyme Commission (EC)Non-specific protein-tyrosine kinase0InformativeDirect
Enzyme Commission (EC)Protein-tyrosine-phosphatase0.00000004532InformativeDirect
Enzyme Commission (EC)Diacylglycerol kinase0Highly InformativeDirect
Enzyme Commission (EC)Acting on GTP; involved in cellular and subcellula0.00000000000001873Highly InformativeDirect
Enzyme Commission (EC)Protein kinase C0.000003652Highly InformativeDirect

Document: EC annotation of SCOP domains

Disease Ontology (DO)

(show details)
DO termFDR (all)SDDO levelAnnotation (direct or inherited)
Disease Ontology (DO)muscular disease1Moderately InformativeInherited

Document: DO annotation of SCOP domains

Human Phenotype (HP)

(show details)
HP termFDR (all)SDHP levelAnnotation (direct or inherited)
Phenotypic Abnormality (PA)Abnormality of the abdomen0.9189Least InformativeInherited
Phenotypic Abnormality (PA)Abnormality of the gastrointestinal tract0.8282Moderately InformativeInherited
Phenotypic Abnormality (PA)Abnormality of the intestine0.7084InformativeInherited
Phenotypic Abnormality (PA)Functional abnormality of the gastrointestinal tract0.06891Highly InformativeInherited

Document: HP annotation of SCOP domains

Mouse Phenotype (MP)

(show details)
MP termFDR (all)SDMP levelAnnotation (direct or inherited)
Mammalian Phenotype (MP)nervous system phenotype0.05211Least InformativeInherited
Mammalian Phenotype (MP)hematopoietic system phenotype0.1809Least InformativeInherited
Mammalian Phenotype (MP)abnormal homeostasis0.5732Least InformativeInherited
Mammalian Phenotype (MP)cardiovascular system phenotype0.9153Least InformativeInherited
Mammalian Phenotype (MP)abnormal blood cell physiology0.09399Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal neuron morphology0.1623Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal cardiovascular development0.561Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal blood vessel morphology0.8213Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal embryogenesis/ development1Moderately InformativeInherited
Mammalian Phenotype (MP)respiratory system phenotype1Moderately InformativeInherited
Mammalian Phenotype (MP)ectopic neuron0.002228InformativeInherited
Mammalian Phenotype (MP)abnormal blood coagulation0.08213InformativeInherited
Mammalian Phenotype (MP)abnormal extraembryonic tissue morphology0.1442InformativeInherited
Mammalian Phenotype (MP)abnormal lung morphology1InformativeInherited
Mammalian Phenotype (MP)abnormal brain pia mater morphology0.000009565Highly InformativeDirect
Mammalian Phenotype (MP)abnormal vascular endothelial cell development0.0002173Highly InformativeDirect
Mammalian Phenotype (MP)ectopic cortical neuron0.0008373Highly InformativeDirect
Mammalian Phenotype (MP)abnormal placenta labyrinth morphology0.6332Highly InformativeInherited
Mammalian Phenotype (MP)abnormal respiratory epithelium morphology0.8816Highly InformativeInherited

Document: MP annotation of SCOP domains

Worm Phenotype (WP)

(show details)
WP termFDR (all)SDWP levelAnnotation (direct or inherited)
Worm Phenotype (WP)cell physiology variant0.00000001362Least InformativeDirect
Worm Phenotype (WP)organism metabolism processing variant0.000004283Least InformativeDirect
Worm Phenotype (WP)organism environmental stimulus response variant0.0009567Least InformativeDirect
Worm Phenotype (WP)growth variant1Least InformativeInherited
Worm Phenotype (WP)organ system development variant0.00000007006Moderately InformativeDirect
Worm Phenotype (WP)organism segment morphology variant0.001114Moderately InformativeInherited
Worm Phenotype (WP)cell death variant0.04673Moderately InformativeInherited
Worm Phenotype (WP)germ cell morphology variant0.4867Moderately InformativeInherited
Worm Phenotype (WP)cell homeostasis metabolism variant0.6343Moderately InformativeInherited
Worm Phenotype (WP)cell organization biogenesis variant0.7249Moderately InformativeInherited
Worm Phenotype (WP)pattern of transgene expression variant0.9653Moderately InformativeInherited
Worm Phenotype (WP)endocytic transport defect1Moderately InformativeInherited
Worm Phenotype (WP)brood size variant0.000008564InformativeDirect
Worm Phenotype (WP)cell migration variant0.00004001InformativeDirect
Worm Phenotype (WP)body wall muscle morphology variant0.0001942InformativeDirect
Worm Phenotype (WP)protein expression variant0.00042InformativeDirect
Worm Phenotype (WP)anchor cell invasion variant0.0006791InformativeDirect
Worm Phenotype (WP)cell stress response variant0.1242InformativeInherited
Worm Phenotype (WP)metal response variant0.1519InformativeInherited
Worm Phenotype (WP)alimentary system development variant0.5478InformativeInherited
Worm Phenotype (WP)copulation variant0.6665InformativeInherited
Worm Phenotype (WP)male behavior variant1InformativeInherited
Worm Phenotype (WP)gonad sheath contractions variant0.00000001048Highly InformativeDirect
Worm Phenotype (WP)growth rate variant0.0000008053Highly InformativeDirect
Worm Phenotype (WP)ovulation variant0.000003121Highly InformativeDirect
Worm Phenotype (WP)endomitotic oocytes0.000009107Highly InformativeDirect
Worm Phenotype (WP)osmotic stress response variant0.00001083Highly InformativeDirect
Worm Phenotype (WP)response to injury variant0.00003822Highly InformativeDirect
Worm Phenotype (WP)coelomocyte uptake defective0.00008757Highly InformativeDirect
Worm Phenotype (WP)drug induced gene expression variant0.0004568Highly InformativeDirect
Worm Phenotype (WP)protein phosphorylation variant0.0009288Highly InformativeDirect
Worm Phenotype (WP)pharyngeal pumping variant0.0009716Highly InformativeDirect
Worm Phenotype (WP)axon morphology variant0.002843Highly InformativeInherited
Worm Phenotype (WP)defecation contraction variant0.00888Highly InformativeInherited
Worm Phenotype (WP)post hermaphrodite contact variant0.03239Highly InformativeInherited
Worm Phenotype (WP)male mating defective0.03511Highly InformativeInherited
Worm Phenotype (WP)cytoskeleton organization biogenesis variant0.1285Highly InformativeInherited

Document: WP annotation of SCOP domains

Yeast Phenotype (YP)

(show details)
YP termFDR (all)SDYP levelAnnotation (direct or inherited)
Yeast Phenotype (YP)morphology0.02278Moderately InformativeInherited
Yeast Phenotype (YP)subcellular morphology0.3582InformativeInherited

Document: YP annotation of SCOP domains

Fly Anatomy (FA)

(show details) Document: FA annotation of SCOP domains

Xenopus Anatomy (XA)

(show details)
XA termFDR (all)SDXA levelAnnotation (direct or inherited)
Xenopus ANatomical entity (XAN)central nervous system0.09215Least InformativeInherited
Xenopus ANatomical entity (XAN)head0.778Least InformativeInherited

Document: XA annotation of SCOP domains

Arabidopsis Plant Ontology (AP)

(show details)
AP termFDR (all)SDAP levelAnnotation (direct or inherited)
Plant ANatomical entity (PAN)sporangium0.00083Least InformativeDirect
Plant ANatomical entity (PAN)whole plant0.06895Least InformativeInherited
Plant ANatomical entity (PAN)microsporophyll0.6549Least InformativeInherited
Plant ANatomical entity (PAN)pollen tube cell0.00002373InformativeDirect
Plant structure DEvelopment stage (PDE)pollen development stage0.00004479Moderately InformativeDirect

Document: AP annotation of SCOP domains

Enzyme Commission (EC)

(show details)