|
GO term |
FDR (all) |
IC level |
SDFO level |
Annotation (direct or inherited) |
| Biological Process (BP) |
blood vessel development |
9.108e-05 |
1.699 |
-- |
DIRECT |
| Biological Process (BP) |
neural tube formation |
0.0002326 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
neural tube closure |
5.994e-05 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
vasculature development |
0.0002165 |
1.658 |
-- |
DIRECT |
| Biological Process (BP) |
myeloid cell homeostasis |
2.717e-05 |
1.854 |
-- |
DIRECT |
| Biological Process (BP) |
heart process |
1.728e-07 |
2 |
-- |
DIRECT |
| Biological Process (BP) |
DNA modification |
0.0004062 |
2.097 |
-- |
DIRECT |
| Biological Process (BP) |
DNA dealkylation involved in DNA repair |
0 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
chromatin organization |
0 |
1.745 |
-- |
DIRECT |
| Biological Process (BP) |
mRNA export from nucleus |
3.634e-06 |
2.222 |
-- |
DIRECT |
| Biological Process (BP) |
amino-acid betaine biosynthetic process |
0 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
terpenoid metabolic process |
0.0002058 |
1.796 |
-- |
DIRECT |
| Biological Process (BP) |
phagocytosis, recognition |
1.327e-11 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
heart development |
1e-05 |
1.796 |
-- |
DIRECT |
| Biological Process (BP) |
tRNA processing |
4.039e-05 |
1.745 |
-- |
DIRECT |
| Biological Process (BP) |
metabolic process |
0 |
0.2411 |
-- |
DIRECT |
| Biological Process (BP) |
carnitine metabolic process |
1.743e-13 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
gibberellin metabolic process |
0 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
gibberellin biosynthetic process |
9.269e-08 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
phenylpropanoid biosynthetic process |
2.274e-06 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
flavonoid metabolic process |
2.603e-06 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
flavonoid biosynthetic process |
5.504e-07 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
response to nitrate |
0.000228 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
vegetative to reproductive phase transition of meristem |
0.0001156 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
negative regulation of organelle organization |
7.003e-05 |
1.796 |
-- |
DIRECT |
| Biological Process (BP) |
primary neural tube formation |
7.888e-05 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
organic acid biosynthetic process |
7.203e-05 |
1.108 |
-- |
DIRECT |
| Biological Process (BP) |
Wnt receptor signaling pathway |
2.973e-07 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
diterpenoid metabolic process |
4.415e-06 |
1.921 |
-- |
DIRECT |
| Biological Process (BP) |
chromatin modification |
0 |
1.854 |
-- |
DIRECT |
| Biological Process (BP) |
covalent chromatin modification |
4.205e-09 |
1.854 |
-- |
DIRECT |
| Biological Process (BP) |
protein hydroxylation |
0 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
peptidyl-aspartic acid modification |
3.399e-13 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of nucleobase-containing compound metabolic process |
7.902e-08 |
1.027 |
-- |
DIRECT |
| Biological Process (BP) |
myeloid cell differentiation |
0.0009836 |
2.097 |
-- |
DIRECT |
| Biological Process (BP) |
T cell differentiation |
0.0001721 |
2.097 |
-- |
DIRECT |
| Biological Process (BP) |
respiratory tube development |
0.000555 |
1.921 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of histone modification |
3.444e-11 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of histone methylation |
0.0002739 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of cellular biosynthetic process |
0.0001189 |
1.009 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of chromatin silencing |
2.639e-12 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
negative regulation of chromatin silencing |
7.361e-07 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of chromosome organization |
1.129e-08 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
T cell differentiation in thymus |
1.807e-07 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
erythrocyte homeostasis |
5.596e-06 |
2.097 |
-- |
DIRECT |
| Biological Process (BP) |
histone lysine methylation |
0.0003676 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
DNA dealkylation |
5.412e-10 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
oxidative RNA demethylation |
5.855e-11 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
protein modification process |
1.987e-08 |
0.9066 |
-- |
DIRECT |
| Biological Process (BP) |
response to decreased oxygen levels |
3.429e-05 |
1.796 |
-- |
DIRECT |
| Biological Process (BP) |
macrophage activation |
3.681e-11 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
ketone biosynthetic process |
0.0007784 |
1.796 |
-- |
DIRECT |
| Biological Process (BP) |
apoptotic cell clearance |
3.447e-08 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
macromolecule modification |
0 |
0.8416 |
-- |
DIRECT |
| Biological Process (BP) |
oxoacid metabolic process |
2.262e-06 |
0.8297 |
-- |
DIRECT |
| Biological Process (BP) |
cellular alkene metabolic process |
0.0001385 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
alkene biosynthetic process |
1.64e-05 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
recognition of apoptotic cell |
2.452e-09 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
cellular metabolic process |
0 |
0.2708 |
-- |
DIRECT |
| Biological Process (BP) |
cellular protein metabolic process |
2.533e-09 |
0.6778 |
-- |
DIRECT |
| Biological Process (BP) |
mitotic cell cycle phase transition |
0.0001214 |
2.222 |
-- |
DIRECT |
| Biological Process (BP) |
positive regulation of gene expression, epigenetic |
5.282e-06 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
carboxylic acid biosynthetic process |
4.734e-05 |
1.108 |
-- |
DIRECT |
| Biological Process (BP) |
male gamete generation |
0.0005552 |
1.854 |
-- |
DIRECT |
| Biological Process (BP) |
erythrocyte development |
3.463e-10 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
homeostasis of number of cells |
0.0003154 |
1.796 |
-- |
DIRECT |
| Biological Process (BP) |
nucleic acid transport |
0.0001581 |
1.921 |
-- |
DIRECT |
| Biological Process (BP) |
RNA transport |
0.0001581 |
1.921 |
-- |
DIRECT |
| Biological Process (BP) |
nuclear export |
0.0002765 |
1.921 |
-- |
DIRECT |
| Biological Process (BP) |
establishment of RNA localization |
0.0001611 |
1.921 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of RNA metabolic process |
8.273e-08 |
1.131 |
-- |
DIRECT |
| Biological Process (BP) |
cardiac muscle contraction |
5.395e-09 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
canonical Wnt receptor signaling pathway |
2.925e-10 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of macromolecule metabolic process |
3.421e-05 |
0.7959 |
-- |
DIRECT |
| Biological Process (BP) |
tube closure |
6.341e-05 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of gene silencing |
3.929e-13 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
negative regulation of gene silencing |
2.177e-06 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
myeloid cell development |
5.795e-09 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
actin-mediated cell contraction |
8.801e-09 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
demethylation |
0 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
oxidative demethylation |
1.158e-14 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
circulatory system development |
4.191e-06 |
1.444 |
-- |
DIRECT |
| Biological Process (BP) |
DNA demethylation |
0.0005041 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
response to karrikin |
5.313e-06 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
olefin metabolic process |
0.0001478 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
olefin biosynthetic process |
1.79e-05 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
negative regulation of chromosome organization |
3.042e-09 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
nucleobase-containing compound metabolic process |
1 |
0.7305 |
-- |
INHERITED FROM: DNA demethylation || DNA dealkylation || DNA dealkylation involved in DNA repair || DNA modification || tRNA processing || oxidative RNA demethylation |
| Biological Process (BP) |
positive regulation of biological process |
1 |
0.8182 |
-- |
INHERITED FROM: negative regulation of chromatin silencing at rDNA || positive regulation of gene expression, epigenetic || negative regulation of chromatin silencing |
| Biological Process (BP) |
regulation of transcription, DNA-dependent |
0.2287 |
1.237 |
-- |
INHERITED FROM: regulation of chromatin silencing at rDNA || regulation of chromatin silencing || negative regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA |
| Biological Process (BP) |
regulation of macromolecule biosynthetic process |
0.03258 |
1.066 |
-- |
INHERITED FROM: regulation of chromatin silencing at rDNA || regulation of chromatin silencing || negative regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA |
| Biological Process (BP) |
regulation of cellular macromolecule biosynthetic process |
0.005082 |
1.119 |
-- |
INHERITED FROM: regulation of chromatin silencing at rDNA || regulation of chromatin silencing || negative regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA |
| Biological Process (BP) |
regulation of RNA biosynthetic process |
0.00465 |
1.167 |
-- |
INHERITED FROM: regulation of chromatin silencing at rDNA || regulation of chromatin silencing || negative regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA |
| Biological Process (BP) |
multicellular organismal development |
0.8104 |
0.7496 |
-- |
INHERITED FROM: tube closure || retina development in camera-type eye || circulatory system development || myeloid cell development || respiratory tube development || erythrocyte development || neural tube closure || blood vessel development || cardiovascular system development || T cell differentiation || lung development || primary neural tube formation || myeloid cell differentiation || vegetative to reproductive phase transition of meristem || heart development || T cell differentiation in thymus || midbrain development || sprouting angiogenesis || erythrocyte differentiation || neural tube formation || vasculature development |
| Biological Process (BP) |
anatomical structure development |
0.9307 |
0.7212 |
-- |
INHERITED FROM: tube closure || retina development in camera-type eye || circulatory system development || myeloid cell development || respiratory tube development || erythrocyte development || neural tube closure || blood vessel development || cardiovascular system development || T cell differentiation || lung development || primary neural tube formation || myeloid cell differentiation || vegetative to reproductive phase transition of meristem || heart development || T cell differentiation in thymus || midbrain development || sprouting angiogenesis || erythrocyte differentiation || neural tube formation || vasculature development |
| Biological Process (BP) |
cell communication |
1 |
0.8477 |
-- |
INHERITED FROM: canonical Wnt receptor signaling pathway || Wnt receptor signaling pathway |
| Biological Process (BP) |
cell surface receptor signaling pathway |
0.7758 |
1.237 |
-- |
INHERITED FROM: canonical Wnt receptor signaling pathway || Wnt receptor signaling pathway |
| Biological Process (BP) |
signaling |
1 |
0.8416 |
-- |
INHERITED FROM: canonical Wnt receptor signaling pathway || Wnt receptor signaling pathway |
| Biological Process (BP) |
single organism signaling |
1 |
0.8601 |
-- |
INHERITED FROM: canonical Wnt receptor signaling pathway || Wnt receptor signaling pathway |
| Biological Process (BP) |
single-multicellular organism process |
1 |
0.6383 |
-- |
INHERITED FROM: cardiac muscle contraction || retina development in camera-type eye || striated muscle contraction || myeloid cell development || respiratory tube development || erythrocyte development || neural tube closure || primary neural tube formation || recognition of apoptotic cell || vegetative to reproductive phase transition of meristem || cardiac muscle cell contraction || heart development || T cell differentiation in thymus || erythrocyte differentiation || vasculature development || tube closure || circulatory system development || phagocytosis, recognition || heart contraction || heart process || blood vessel development || cardiovascular system development || T cell differentiation || lung development || myeloid cell differentiation || muscle system process || midbrain development || sprouting angiogenesis || neural tube formation |
| Biological Process (BP) |
single-organism process |
0.1904 |
0.3316 |
-- |
INHERITED FROM: cardiac muscle contraction || retina development in camera-type eye || striated muscle contraction || histone demethylation || actin-mediated cell contraction || myeloid cell development || apoptotic cell clearance || mRNA export from nucleus || respiratory tube development || male gamete generation || mitotic cell cycle phase transition || erythrocyte development || nuclear export || negative regulation of organelle organization || spermatogenesis || negative regulation of histone modification || recognition of apoptotic cell || vegetative to reproductive phase transition of meristem || macrophage activation || cell cycle phase transition || canonical Wnt receptor signaling pathway || erythrocyte differentiation || phagocytosis || histone modification || negative regulation of histone methylation || phagocytosis, recognition || myeloid leukocyte activation || cardiovascular system development || chromatin modification || lung development || chromosome organization || organelle organization || muscle system process || sprouting angiogenesis || DNA dealkylation involved in DNA repair || neural tube closure || RNA export from nucleus || histone lysine methylation || primary neural tube formation || cardiac muscle cell contraction || heart development || negative regulation of chromosome organization || T cell differentiation in thymus || vasculature development || tube closure || chromatin organization || circulatory system development || actin filament-based movement || heart contraction || heart process || blood vessel development || Wnt receptor signaling pathway || T cell differentiation || myeloid cell differentiation || covalent chromatin modification || midbrain development || neural tube formation |
| Biological Process (BP) |
system development |
0.8223 |
0.8069 |
-- |
INHERITED FROM: retina development in camera-type eye || circulatory system development || myeloid cell development || respiratory tube development || erythrocyte development || neural tube closure || blood vessel development || cardiovascular system development || T cell differentiation || lung development || primary neural tube formation || myeloid cell differentiation || vegetative to reproductive phase transition of meristem || heart development || T cell differentiation in thymus || midbrain development || sprouting angiogenesis || erythrocyte differentiation || neural tube formation || vasculature development |
| Biological Process (BP) |
eye development |
0.08587 |
1.62 |
-- |
INHERITED FROM: retina development in camera-type eye |
| Biological Process (BP) |
camera-type eye development |
0.003128 |
1.745 |
-- |
INHERITED FROM: retina development in camera-type eye |
| Biological Process (BP) |
RNA localization |
0.001593 |
1.921 |
-- |
INHERITED FROM: mRNA transport || RNA transport || establishment of RNA localization || mRNA export from nucleus || RNA export from nucleus |
| Biological Process (BP) |
establishment of localization |
1 |
0.7696 |
-- |
INHERITED FROM: mRNA transport || RNA transport || phagocytosis || establishment of RNA localization || recognition of apoptotic cell || apoptotic cell clearance || phagocytosis, recognition || mRNA export from nucleus || nucleic acid transport || RNA export from nucleus || nuclear export |
| Biological Process (BP) |
transport |
1 |
0.7747 |
-- |
INHERITED FROM: mRNA transport || RNA transport || phagocytosis || recognition of apoptotic cell || apoptotic cell clearance || phagocytosis, recognition || mRNA export from nucleus || nucleic acid transport || RNA export from nucleus || nuclear export |
| Biological Process (BP) |
nucleobase-containing compound transport |
0.001109 |
1.854 |
-- |
INHERITED FROM: mRNA transport || RNA transport || mRNA export from nucleus || nucleic acid transport || RNA export from nucleus |
| Biological Process (BP) |
cell development |
1 |
1.222 |
-- |
INHERITED FROM: erythrocyte development || myeloid cell development |
| Biological Process (BP) |
biological_process |
0.001327 |
0 |
-- |
INHERITED FROM: regulation of mRNA splicing, via spliceosome || cellular component organization or biogenesis || phenylpropanoid metabolic process || striated muscle contraction || regulation of nucleobase-containing compound metabolic process || myeloid cell development || apoptotic cell clearance || peptidyl-lysine modification || male gamete generation || response to hypoxia || erythrocyte development || nuclear export || negative regulation of organelle organization || protein modification process || vegetative to reproductive phase transition of meristem || cell cycle phase transition || canonical Wnt receptor signaling pathway || regulation of gene silencing || histone modification || negative regulation of histone methylation || myeloid leukocyte activation || nucleic acid transport || DNA modification || cardiovascular system development || negative regulation of chromatin silencing at rDNA || amino-acid betaine biosynthetic process || lung development || protein demethylation || peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine || DNA demethylation || chromosome organization || response to decreased oxygen levels || carnitine biosynthetic process || sprouting angiogenesis || macromolecule modification || isoprenoid metabolic process || establishment of RNA localization || myeloid cell homeostasis || cellular protein modification process || DNA dealkylation involved in DNA repair || erythrocyte homeostasis || organic acid biosynthetic process || histone lysine methylation || protein metabolic process || regulation of chromosome organization || primary neural tube formation || cardiac muscle cell contraction || heart development || regulation of histone modification || small molecule biosynthetic process || T cell differentiation in thymus || tube closure || regulation of nitrogen compound metabolic process || negative regulation of gene silencing || regulation of chromatin silencing at rDNA || circulatory system development || cellular macromolecule metabolic process || heart contraction || heart process || peptidyl-aspartic acid modification || isoprenoid biosynthetic process || metabolic process || protein dealkylation || alkene biosynthetic process || RNA transport || T cell differentiation || regulation of cellular biosynthetic process || flavonoid metabolic process || single-organism metabolic process || peptidyl-lysine hydroxylation || response to nitrate || covalent chromatin modification || regulation of chromatin silencing || tRNA processing || regulation of macromolecule metabolic process || neural tube formation || cardiac muscle contraction || retina development in camera-type eye || histone demethylation || actin-mediated cell contraction || amino-acid betaine metabolic process || mRNA export from nucleus || respiratory tube development || mitotic cell cycle phase transition || cellular protein metabolic process || positive regulation of gene expression, epigenetic || spermatogenesis || negative regulation of histone modification || regulation of RNA metabolic process || response to karrikin || recognition of apoptotic cell || terpenoid metabolic process || homeostasis of number of cells || macrophage activation || regulation of histone methylation || erythrocyte differentiation || demethylation || phagocytosis || organic hydroxy compound biosynthetic process || negative regulation of osteoblast differentiation || phagocytosis, recognition || gibberellin biosynthetic process || regulation of metabolic process || olefin biosynthetic process || chromatin modification || negative regulation of protein modification process || flavonoid biosynthetic process || negative regulation of chromatin silencing || regulation of cellular metabolic process || organelle organization || muscle system process || oxidative RNA demethylation || protein hydroxylation || cellular metabolic process || carboxylic acid biosynthetic process || neural tube closure || oxidative demethylation || RNA export from nucleus || cellular alkene metabolic process || ethylene metabolic process || phenylpropanoid biosynthetic process || negative regulation of chromosome organization || oxoacid metabolic process || olefin metabolic process || vasculature development || mRNA transport || negative regulation of metabolic process || chromatin organization || ketone biosynthetic process || actin filament-based movement || DNA dealkylation || blood vessel development || negative regulation of cellular metabolic process || carnitine metabolic process || Wnt receptor signaling pathway || gibberellin metabolic process || diterpenoid metabolic process || myeloid cell differentiation || midbrain development || regulation of gene expression || regulation of osteoblast differentiation |
| Biological Process (BP) |
regulation of primary metabolic process |
0.6797 |
0.7852 |
-- |
INHERITED FROM: regulation of mRNA splicing, via spliceosome || negative regulation of histone modification || negative regulation of protein modification process || regulation of chromatin silencing at rDNA || regulation of nucleobase-containing compound metabolic process || negative regulation of chromatin silencing || regulation of RNA metabolic process || negative regulation of histone methylation || regulation of histone modification || regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA || regulation of histone methylation |
| Biological Process (BP) |
biological regulation |
0.004544 |
0.4202 |
-- |
INHERITED FROM: regulation of mRNA splicing, via spliceosome || regulation of nucleobase-containing compound metabolic process || erythrocyte development || positive regulation of gene expression, epigenetic || negative regulation of organelle organization || negative regulation of histone modification || regulation of RNA metabolic process || homeostasis of number of cells || canonical Wnt receptor signaling pathway || regulation of histone methylation || erythrocyte differentiation || regulation of gene silencing || negative regulation of osteoblast differentiation || negative regulation of histone methylation || negative regulation of chromatin silencing at rDNA || regulation of metabolic process || negative regulation of protein modification process || DNA demethylation || negative regulation of chromatin silencing || regulation of cellular metabolic process || myeloid cell homeostasis || erythrocyte homeostasis || regulation of chromosome organization || negative regulation of chromosome organization || regulation of histone modification || negative regulation of metabolic process || regulation of nitrogen compound metabolic process || negative regulation of gene silencing || regulation of chromatin silencing at rDNA || negative regulation of cellular metabolic process || Wnt receptor signaling pathway || regulation of cellular biosynthetic process || regulation of chromatin silencing || regulation of macromolecule metabolic process || regulation of gene expression || regulation of osteoblast differentiation |
| Biological Process (BP) |
regulation of biological process |
0.002198 |
0.4486 |
-- |
INHERITED FROM: regulation of mRNA splicing, via spliceosome || regulation of nucleobase-containing compound metabolic process || positive regulation of gene expression, epigenetic || negative regulation of organelle organization || negative regulation of histone modification || regulation of RNA metabolic process || canonical Wnt receptor signaling pathway || regulation of histone methylation || regulation of gene silencing || negative regulation of osteoblast differentiation || negative regulation of histone methylation || negative regulation of chromatin silencing at rDNA || regulation of metabolic process || negative regulation of protein modification process || DNA demethylation || negative regulation of chromatin silencing || regulation of cellular metabolic process || regulation of chromosome organization || negative regulation of chromosome organization || regulation of histone modification || negative regulation of metabolic process || regulation of nitrogen compound metabolic process || negative regulation of gene silencing || regulation of chromatin silencing at rDNA || negative regulation of cellular metabolic process || Wnt receptor signaling pathway || regulation of cellular biosynthetic process || regulation of chromatin silencing || regulation of macromolecule metabolic process || regulation of gene expression || regulation of osteoblast differentiation |
| Biological Process (BP) |
regulation of mRNA processing |
0.01021 |
2.699 |
-- |
INHERITED FROM: regulation of mRNA splicing, via spliceosome |
| Biological Process (BP) |
organic acid metabolic process |
0.2468 |
0.8239 |
-- |
INHERITED FROM: carboxylic acid biosynthetic process || gibberellin biosynthetic process || organic acid biosynthetic process || carnitine biosynthetic process || carnitine metabolic process || oxoacid metabolic process || gibberellin metabolic process |
| Biological Process (BP) |
regulation of cell differentiation |
1 |
1.357 |
-- |
INHERITED FROM: negative regulation of osteoblast differentiation || regulation of osteoblast differentiation |
| Biological Process (BP) |
negative regulation of cell differentiation |
1 |
1.745 |
-- |
INHERITED FROM: negative regulation of osteoblast differentiation |
| Biological Process (BP) |
carboxylic acid metabolic process |
0.08997 |
0.8416 |
-- |
INHERITED FROM: carnitine biosynthetic process || carnitine metabolic process || gibberellin metabolic process || carboxylic acid biosynthetic process || gibberellin biosynthetic process |
| Biological Process (BP) |
cell cycle |
1 |
1.377 |
-- |
INHERITED FROM: mitotic cell cycle phase transition || cell cycle phase transition |
| Biological Process (BP) |
endocytosis |
0.4139 |
1.854 |
-- |
INHERITED FROM: apoptotic cell clearance || phagocytosis || phagocytosis, recognition || recognition of apoptotic cell |
| Biological Process (BP) |
small molecule metabolic process |
1 |
0.6421 |
-- |
INHERITED FROM: ketone biosynthetic process || carboxylic acid biosynthetic process || gibberellin biosynthetic process || organic acid biosynthetic process || carnitine metabolic process || gibberellin metabolic process || flavonoid biosynthetic process || flavonoid metabolic process || small molecule biosynthetic process || carnitine biosynthetic process || oxoacid metabolic process |
| Biological Process (BP) |
response to oxygen levels |
0.001587 |
1.796 |
-- |
INHERITED FROM: response to decreased oxygen levels || response to hypoxia |
| Biological Process (BP) |
cellular component organization |
0.0677 |
0.6819 |
-- |
INHERITED FROM: histone lysine methylation || chromatin organization || chromatin modification || chromosome organization || histone demethylation || histone modification || organelle organization || covalent chromatin modification |
| Biological Process (BP) |
protein alkylation |
0.9378 |
2.097 |
-- |
INHERITED FROM: histone lysine methylation |
| Biological Process (BP) |
histone methylation |
1 |
2.222 |
-- |
INHERITED FROM: histone lysine methylation |
| Biological Process (BP) |
methylation |
0.08834 |
1.854 |
-- |
INHERITED FROM: histone lysine methylation |
| Biological Process (BP) |
macromolecule methylation |
0.2417 |
1.854 |
-- |
INHERITED FROM: histone lysine methylation |
| Biological Process (BP) |
positive regulation of macromolecule metabolic process |
1 |
1.301 |
-- |
INHERITED FROM: negative regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA || positive regulation of gene expression, epigenetic |
| Biological Process (BP) |
positive regulation of biosynthetic process |
1 |
1.495 |
-- |
INHERITED FROM: negative regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA |
| Biological Process (BP) |
positive regulation of cellular metabolic process |
1 |
1.208 |
-- |
INHERITED FROM: negative regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA |
| Biological Process (BP) |
positive regulation of transcription, DNA-dependent |
1 |
1.745 |
-- |
INHERITED FROM: negative regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA |
| Biological Process (BP) |
positive regulation of nucleobase-containing compound metabolic process |
1 |
1.585 |
-- |
INHERITED FROM: negative regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA |
| Biological Process (BP) |
positive regulation of RNA metabolic process |
1 |
1.658 |
-- |
INHERITED FROM: negative regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA |
| Biological Process (BP) |
negative regulation of macromolecule metabolic process |
0.06848 |
1.301 |
-- |
INHERITED FROM: negative regulation of histone methylation || negative regulation of histone modification || negative regulation of protein modification process |
| Biological Process (BP) |
negative regulation of cellular protein metabolic process |
0.3662 |
1.62 |
-- |
INHERITED FROM: negative regulation of histone methylation || negative regulation of histone modification || negative regulation of protein modification process |
| Biological Process (BP) |
regulation of protein modification process |
0.346 |
1.377 |
-- |
INHERITED FROM: regulation of histone methylation || regulation of histone modification || negative regulation of histone methylation || negative regulation of histone modification || negative regulation of protein modification process |
| Biological Process (BP) |
regulation of cellular protein metabolic process |
1 |
1.252 |
-- |
INHERITED FROM: regulation of histone methylation || regulation of histone modification || negative regulation of histone methylation || negative regulation of histone modification || negative regulation of protein modification process |
| Biological Process (BP) |
brain development |
0.1592 |
1.658 |
-- |
INHERITED FROM: midbrain development |
| Biological Process (BP) |
respiratory system development |
0.01818 |
1.921 |
-- |
INHERITED FROM: lung development |
| Biological Process (BP) |
immune system development |
0.06823 |
1.585 |
-- |
INHERITED FROM: erythrocyte differentiation || myeloid cell differentiation || myeloid cell development || T cell differentiation || T cell differentiation in thymus || erythrocyte development |
| Biological Process (BP) |
hemopoiesis |
1 |
1.699 |
-- |
INHERITED FROM: erythrocyte differentiation || myeloid cell differentiation || myeloid cell development || T cell differentiation || T cell differentiation in thymus || erythrocyte development |
| Biological Process (BP) |
leukocyte activation |
0.07916 |
1.553 |
-- |
INHERITED FROM: T cell differentiation || T cell differentiation in thymus || myeloid leukocyte activation || macrophage activation |
| Biological Process (BP) |
leukocyte differentiation |
0.009897 |
1.854 |
-- |
INHERITED FROM: T cell differentiation || T cell differentiation in thymus |
| Biological Process (BP) |
lymphocyte activation |
0.03109 |
1.699 |
-- |
INHERITED FROM: T cell differentiation || T cell differentiation in thymus |
| Biological Process (BP) |
cellular developmental process |
1 |
0.9666 |
-- |
INHERITED FROM: T cell differentiation || myeloid cell differentiation || myeloid cell development || erythrocyte development || T cell differentiation in thymus || erythrocyte differentiation |
| Biological Process (BP) |
macromolecule metabolic process |
0.05761 |
0.4634 |
-- |
INHERITED FROM: protein hydroxylation || macromolecule modification || histone demethylation || histone modification || cellular protein modification process || cellular macromolecule metabolic process || DNA dealkylation || DNA dealkylation involved in DNA repair || peptidyl-lysine modification || peptidyl-aspartic acid modification || cellular protein metabolic process || DNA modification || protein dealkylation || protein modification process || histone lysine methylation || protein metabolic process || protein demethylation || peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine || DNA demethylation || peptidyl-lysine hydroxylation || tRNA processing || oxidative RNA demethylation |
| Biological Process (BP) |
organic substance metabolic process |
0.00245 |
0.2676 |
-- |
INHERITED FROM: protein hydroxylation || macromolecule modification || isoprenoid metabolic process || phenylpropanoid metabolic process || histone demethylation || cellular protein modification process || carboxylic acid biosynthetic process || amino-acid betaine metabolic process || DNA dealkylation involved in DNA repair || peptidyl-lysine modification || cellular protein metabolic process || cellular alkene metabolic process || protein modification process || ethylene metabolic process || histone lysine methylation || phenylpropanoid biosynthetic process || protein metabolic process || terpenoid metabolic process || olefin metabolic process || organic hydroxy compound biosynthetic process || ketone biosynthetic process || histone modification || cellular macromolecule metabolic process || DNA dealkylation || gibberellin biosynthetic process || peptidyl-aspartic acid modification || isoprenoid biosynthetic process || DNA modification || carnitine metabolic process || protein dealkylation || alkene biosynthetic process || gibberellin metabolic process || olefin biosynthetic process || amino-acid betaine biosynthetic process || protein demethylation || flavonoid biosynthetic process || peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine || DNA demethylation || diterpenoid metabolic process || flavonoid metabolic process || peptidyl-lysine hydroxylation || tRNA processing || carnitine biosynthetic process || oxidative RNA demethylation |
| Biological Process (BP) |
primary metabolic process |
1 |
0.2976 |
-- |
INHERITED FROM: protein hydroxylation || isoprenoid metabolic process || histone demethylation || histone modification || cellular protein modification process || DNA dealkylation || gibberellin biosynthetic process || DNA dealkylation involved in DNA repair || peptidyl-lysine modification || peptidyl-aspartic acid modification || cellular protein metabolic process || isoprenoid biosynthetic process || DNA modification || protein dealkylation || gibberellin metabolic process || protein modification process || histone lysine methylation || protein metabolic process || protein demethylation || peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine || DNA demethylation || diterpenoid metabolic process || terpenoid metabolic process || peptidyl-lysine hydroxylation || tRNA processing || oxidative RNA demethylation |
| Biological Process (BP) |
morphogenesis of an epithelium |
0.7967 |
1.658 |
-- |
INHERITED FROM: primary neural tube formation || neural tube closure || neural tube formation |
| Biological Process (BP) |
embryo development |
0.4126 |
1.301 |
-- |
INHERITED FROM: primary neural tube formation || neural tube closure || neural tube formation |
| Biological Process (BP) |
reproductive structure development |
0.2392 |
1.658 |
-- |
INHERITED FROM: vegetative to reproductive phase transition of meristem |
| Biological Process (BP) |
response to chemical stimulus |
1 |
0.8861 |
-- |
INHERITED FROM: response to nitrate |
| Biological Process (BP) |
response to nitrogen compound |
0.2319 |
1.377 |
-- |
INHERITED FROM: response to nitrate |
| Biological Process (BP) |
negative regulation of biological process |
0.06836 |
0.8665 |
-- |
INHERITED FROM: negative regulation of metabolic process || negative regulation of gene silencing || negative regulation of osteoblast differentiation || negative regulation of histone methylation || negative regulation of cellular metabolic process || negative regulation of chromatin silencing at rDNA || negative regulation of organelle organization || negative regulation of histone modification || negative regulation of protein modification process || negative regulation of chromatin silencing || negative regulation of chromosome organization |
| Biological Process (BP) |
organic substance biosynthetic process |
1 |
0.5376 |
-- |
INHERITED FROM: phenylpropanoid biosynthetic process || olefin biosynthetic process || amino-acid betaine biosynthetic process || flavonoid biosynthetic process || organic hydroxy compound biosynthetic process || ketone biosynthetic process || carboxylic acid biosynthetic process || gibberellin biosynthetic process || isoprenoid biosynthetic process || carnitine biosynthetic process || alkene biosynthetic process |
| Biological Process (BP) |
single-organism biosynthetic process |
0.2442 |
0.983 |
-- |
INHERITED FROM: phenylpropanoid biosynthetic process || small molecule biosynthetic process || flavonoid biosynthetic process || ketone biosynthetic process || organic acid biosynthetic process || carnitine biosynthetic process || carboxylic acid biosynthetic process || gibberellin biosynthetic process |
| Biological Process (BP) |
cellular biosynthetic process |
1 |
0.5498 |
-- |
INHERITED FROM: phenylpropanoid biosynthetic process || amino-acid betaine biosynthetic process || flavonoid biosynthetic process || ketone biosynthetic process || carboxylic acid biosynthetic process || gibberellin biosynthetic process || isoprenoid biosynthetic process || organic acid biosynthetic process || carnitine biosynthetic process || alkene biosynthetic process |
| Biological Process (BP) |
cellular process |
0.004385 |
0.1415 |
-- |
INHERITED FROM: phenylpropanoid metabolic process || histone demethylation || actin-mediated cell contraction || myeloid cell development || amino-acid betaine metabolic process || mRNA export from nucleus || peptidyl-lysine modification || mitotic cell cycle phase transition || cellular protein metabolic process || erythrocyte development || nuclear export || negative regulation of organelle organization || negative regulation of histone modification || recognition of apoptotic cell || terpenoid metabolic process || macrophage activation || cell cycle phase transition || canonical Wnt receptor signaling pathway || erythrocyte differentiation || histone modification || negative regulation of histone methylation || phagocytosis, recognition || gibberellin biosynthetic process || myeloid leukocyte activation || DNA modification || amino-acid betaine biosynthetic process || chromatin modification || protein demethylation || flavonoid biosynthetic process || peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine || DNA demethylation || chromosome organization || organelle organization || carnitine biosynthetic process || oxidative RNA demethylation || protein hydroxylation || isoprenoid metabolic process || cellular metabolic process || cellular protein modification process || carboxylic acid biosynthetic process || DNA dealkylation involved in DNA repair || organic acid biosynthetic process || RNA export from nucleus || cellular alkene metabolic process || ethylene metabolic process || histone lysine methylation || phenylpropanoid biosynthetic process || cardiac muscle cell contraction || negative regulation of chromosome organization || T cell differentiation in thymus || oxoacid metabolic process || chromatin organization || ketone biosynthetic process || actin filament-based movement || cellular macromolecule metabolic process || DNA dealkylation || peptidyl-aspartic acid modification || isoprenoid biosynthetic process || carnitine metabolic process || protein dealkylation || alkene biosynthetic process || Wnt receptor signaling pathway || gibberellin metabolic process || T cell differentiation || diterpenoid metabolic process || myeloid cell differentiation || flavonoid metabolic process || peptidyl-lysine hydroxylation || covalent chromatin modification || tRNA processing |
| Biological Process (BP) |
secondary metabolic process |
0.4855 |
1.854 |
-- |
INHERITED FROM: phenylpropanoid metabolic process || phenylpropanoid biosynthetic process || flavonoid metabolic process || flavonoid biosynthetic process |
| Biological Process (BP) |
diterpenoid biosynthetic process |
0.01674 |
2.398 |
-- |
INHERITED FROM: gibberellin biosynthetic process |
| Biological Process (BP) |
terpenoid biosynthetic process |
0.3561 |
2.222 |
-- |
INHERITED FROM: gibberellin biosynthetic process |
| Biological Process (BP) |
RNA processing |
0.03627 |
1.377 |
-- |
INHERITED FROM: tRNA processing |
| Biological Process (BP) |
ncRNA metabolic process |
0.2255 |
1.444 |
-- |
INHERITED FROM: tRNA processing |
| Biological Process (BP) |
reproductive process |
0.605 |
1.143 |
-- |
INHERITED FROM: spermatogenesis || male gamete generation || vegetative to reproductive phase transition of meristem |
| Biological Process (BP) |
gamete generation |
0.1242 |
1.553 |
-- |
INHERITED FROM: spermatogenesis || male gamete generation |
| Biological Process (BP) |
multicellular organism reproduction |
0.2109 |
1.301 |
-- |
INHERITED FROM: spermatogenesis || male gamete generation |
| Biological Process (BP) |
muscle contraction |
0.781 |
1.854 |
-- |
INHERITED FROM: striated muscle contraction || cardiac muscle cell contraction || cardiac muscle contraction |
| Biological Process (BP) |
cell recognition |
0.001045 |
2.398 |
-- |
INHERITED FROM: phagocytosis, recognition || recognition of apoptotic cell |
| Biological Process (BP) |
single-organism transport |
1 |
0.8013 |
-- |
INHERITED FROM: phagocytosis || recognition of apoptotic cell || apoptotic cell clearance || phagocytosis, recognition |
| Biological Process (BP) |
lipid metabolic process |
0.679 |
0.9431 |
-- |
INHERITED FROM: isoprenoid metabolic process || isoprenoid biosynthetic process || diterpenoid metabolic process || gibberellin metabolic process || gibberellin biosynthetic process || terpenoid metabolic process |
| Biological Process (BP) |
cellular nitrogen compound metabolic process |
1 |
0.585 |
-- |
INHERITED FROM: amino-acid betaine biosynthetic process || DNA demethylation || DNA dealkylation || amino-acid betaine metabolic process || DNA dealkylation involved in DNA repair || DNA modification || tRNA processing || carnitine biosynthetic process || carnitine metabolic process || oxidative RNA demethylation |
| Biological Process (BP) |
intracellular transport |
0.9542 |
1.194 |
-- |
INHERITED FROM: mRNA export from nucleus || RNA export from nucleus || nuclear export |
| Biological Process (BP) |
nuclear transport |
0.03358 |
1.658 |
-- |
INHERITED FROM: mRNA export from nucleus || RNA export from nucleus || nuclear export |
| Biological Process (BP) |
establishment of localization in cell |
1 |
1.119 |
-- |
INHERITED FROM: mRNA export from nucleus || RNA export from nucleus || nuclear export |
| Biological Process (BP) |
cellular response to stimulus |
1 |
0.7645 |
-- |
INHERITED FROM: DNA dealkylation involved in DNA repair || canonical Wnt receptor signaling pathway || Wnt receptor signaling pathway |
| Biological Process (BP) |
nucleic acid metabolic process |
1 |
0.9066 |
-- |
INHERITED FROM: DNA modification || DNA demethylation || tRNA processing || oxidative RNA demethylation || DNA dealkylation || DNA dealkylation involved in DNA repair |
| Biological Process (BP) |
circulatory system process |
0.006918 |
1.745 |
-- |
INHERITED FROM: heart process || cardiac muscle contraction || cardiac muscle cell contraction || heart contraction |
| Biological Process (BP) |
regulation of biological quality |
1 |
0.8539 |
-- |
INHERITED FROM: myeloid cell homeostasis || erythrocyte homeostasis || homeostasis of number of cells || erythrocyte development || erythrocyte differentiation |
| Biological Process (BP) |
blood vessel morphogenesis |
0.03253 |
1.745 |
-- |
INHERITED FROM: sprouting angiogenesis |
| Biological Process (BP) |
tube morphogenesis |
0.3818 |
1.854 |
-- |
INHERITED FROM: neural tube closure || tube closure || neural tube formation || primary neural tube formation |
| Biological Process (BP) |
embryonic epithelial tube formation |
0.001034 |
2.222 |
-- |
INHERITED FROM: neural tube closure || neural tube formation || primary neural tube formation |
| Biological Process (BP) |
embryo development ending in birth or egg hatching |
0.02247 |
1.469 |
-- |
INHERITED FROM: neural tube closure || neural tube formation || primary neural tube formation |
| Biological Process (BP) |
neural tube development |
0.004859 |
2.398 |
-- |
INHERITED FROM: neural tube closure || neural tube formation || primary neural tube formation |
| Biological Process (BP) |
epithelial tube formation |
0.00105 |
2.222 |
-- |
INHERITED FROM: neural tube closure || neural tube formation || primary neural tube formation |
| Biological Process (BP) |
response to stress |
0.06018 |
0.8125 |
-- |
INHERITED FROM: response to hypoxia || DNA dealkylation involved in DNA repair |
| Biological Process (BP) |
regulation of metabolic process |
4.008e-15 |
0.6946 |
Least Informative |
DIRECT |
| Biological Process (BP) |
protein metabolic process |
1.407e-09 |
0.6383 |
Least Informative |
DIRECT |
| Biological Process (BP) |
cellular macromolecule metabolic process |
6.336e-05 |
0.4976 |
Least Informative |
DIRECT |
| Biological Process (BP) |
single-organism metabolic process |
0 |
0.5376 |
Least Informative |
DIRECT |
| Biological Process (BP) |
cellular component organization or biogenesis |
1.814e-08 |
0.6536 |
Least Informative |
DIRECT |
| Biological Process (BP) |
multicellular organismal process |
1 |
0.6091 |
Least Informative |
INHERITED FROM: cardiac muscle contraction || retina development in camera-type eye || striated muscle contraction || myeloid cell development || respiratory tube development || male gamete generation || erythrocyte development || neural tube closure || spermatogenesis || primary neural tube formation || recognition of apoptotic cell || vegetative to reproductive phase transition of meristem || cardiac muscle cell contraction || heart development || T cell differentiation in thymus || erythrocyte differentiation || vasculature development || tube closure || circulatory system development || phagocytosis, recognition || heart contraction || heart process || blood vessel development || cardiovascular system development || T cell differentiation || lung development || myeloid cell differentiation || muscle system process || midbrain development || sprouting angiogenesis || neural tube formation |
| Biological Process (BP) |
developmental process |
1 |
0.6904 |
Least Informative |
INHERITED FROM: retina development in camera-type eye || myeloid cell development || respiratory tube development || erythrocyte development || neural tube closure || primary neural tube formation || vegetative to reproductive phase transition of meristem || heart development || T cell differentiation in thymus || erythrocyte differentiation || vasculature development || tube closure || circulatory system development || blood vessel development || cardiovascular system development || T cell differentiation || lung development || myeloid cell differentiation || midbrain development || sprouting angiogenesis || neural tube formation |
| Biological Process (BP) |
localization |
1 |
0.6946 |
Least Informative |
INHERITED FROM: mRNA transport || RNA transport || phagocytosis || establishment of RNA localization || recognition of apoptotic cell || apoptotic cell clearance || phagocytosis, recognition || mRNA export from nucleus || nucleic acid transport || RNA export from nucleus || nuclear export |
| Biological Process (BP) |
regulation of cellular process |
0.7028 |
0.5317 |
Least Informative |
INHERITED FROM: regulation of mRNA splicing, via spliceosome || regulation of nucleobase-containing compound metabolic process || negative regulation of organelle organization || regulation of chromosome organization || negative regulation of histone modification || regulation of RNA metabolic process || negative regulation of chromosome organization || regulation of histone modification || canonical Wnt receptor signaling pathway || regulation of histone methylation || negative regulation of gene silencing || regulation of gene silencing || negative regulation of osteoblast differentiation || regulation of chromatin silencing at rDNA || negative regulation of histone methylation || negative regulation of cellular metabolic process || negative regulation of chromatin silencing at rDNA || Wnt receptor signaling pathway || negative regulation of protein modification process || negative regulation of chromatin silencing || regulation of cellular metabolic process || regulation of cellular biosynthetic process || regulation of chromatin silencing || regulation of osteoblast differentiation |
| Biological Process (BP) |
nitrogen compound metabolic process |
1 |
0.5171 |
Least Informative |
INHERITED FROM: DNA dealkylation || amino-acid betaine metabolic process || DNA dealkylation involved in DNA repair || DNA modification || carnitine metabolic process || amino-acid betaine biosynthetic process || DNA demethylation || tRNA processing || carnitine biosynthetic process || oxidative RNA demethylation |
| Biological Process (BP) |
single-organism cellular process |
0.05567 |
0.3915 |
Least Informative |
INHERITED FROM: histone demethylation || actin-mediated cell contraction || myeloid cell development || DNA dealkylation involved in DNA repair || mRNA export from nucleus || mitotic cell cycle phase transition || erythrocyte development || RNA export from nucleus || nuclear export || negative regulation of organelle organization || histone lysine methylation || negative regulation of histone modification || recognition of apoptotic cell || cardiac muscle cell contraction || negative regulation of chromosome organization || macrophage activation || cell cycle phase transition || T cell differentiation in thymus || canonical Wnt receptor signaling pathway || erythrocyte differentiation || chromatin organization || histone modification || actin filament-based movement || negative regulation of histone methylation || phagocytosis, recognition || myeloid leukocyte activation || Wnt receptor signaling pathway || T cell differentiation || chromatin modification || chromosome organization || myeloid cell differentiation || organelle organization || covalent chromatin modification |
| Biological Process (BP) |
heterocycle metabolic process |
1 |
0.6308 |
Least Informative |
INHERITED FROM: flavonoid biosynthetic process || DNA demethylation || DNA dealkylation || DNA dealkylation involved in DNA repair || flavonoid metabolic process || DNA modification || tRNA processing || oxidative RNA demethylation |
| Biological Process (BP) |
biosynthetic process |
1 |
0.52 |
Least Informative |
INHERITED FROM: phenylpropanoid biosynthetic process || olefin biosynthetic process || amino-acid betaine biosynthetic process || flavonoid biosynthetic process || organic hydroxy compound biosynthetic process || ketone biosynthetic process || carboxylic acid biosynthetic process || gibberellin biosynthetic process || small molecule biosynthetic process || isoprenoid biosynthetic process || organic acid biosynthetic process || carnitine biosynthetic process || alkene biosynthetic process |
| Biological Process (BP) |
cellular aromatic compound metabolic process |
1 |
0.6271 |
Least Informative |
INHERITED FROM: phenylpropanoid metabolic process || DNA dealkylation || DNA dealkylation involved in DNA repair || DNA modification || phenylpropanoid biosynthetic process || flavonoid biosynthetic process || DNA demethylation || flavonoid metabolic process || tRNA processing || oxidative RNA demethylation |
| Biological Process (BP) |
organic cyclic compound metabolic process |
1 |
0.5817 |
Least Informative |
INHERITED FROM: phenylpropanoid metabolic process || DNA dealkylation || DNA dealkylation involved in DNA repair || DNA modification || phenylpropanoid biosynthetic process || flavonoid biosynthetic process || DNA demethylation || flavonoid metabolic process || tRNA processing || oxidative RNA demethylation |
| Biological Process (BP) |
response to stimulus |
0.8176 |
0.5498 |
Least Informative |
INHERITED FROM: DNA dealkylation involved in DNA repair || response to hypoxia || Wnt receptor signaling pathway || response to karrikin || response to nitrate || response to decreased oxygen levels || canonical Wnt receptor signaling pathway |
| Biological Process (BP) |
cellular protein modification process |
0 |
0.9066 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
organelle organization |
0 |
0.8996 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
negative regulation of metabolic process |
0.0005824 |
1.222 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
regulation of gene expression |
3.375e-08 |
0.9914 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
regulation of cellular metabolic process |
9.393e-10 |
0.7905 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
small molecule biosynthetic process |
9.967e-06 |
1 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
regulation of nitrogen compound metabolic process |
0.0003709 |
0.9914 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
regulation of cellular component organization |
1 |
1.18 |
Moderately Informative |
INHERITED FROM: negative regulation of chromosome organization || regulation of histone modification || regulation of chromosome organization || negative regulation of histone modification || regulation of histone methylation || negative regulation of histone methylation || negative regulation of organelle organization |
| Biological Process (BP) |
organic hydroxy compound metabolic process |
0.007884 |
1.208 |
Moderately Informative |
INHERITED FROM: organic hydroxy compound biosynthetic process || carnitine biosynthetic process || carnitine metabolic process |
| Biological Process (BP) |
regulation of biosynthetic process |
0.002514 |
0.9914 |
Moderately Informative |
INHERITED FROM: regulation of chromatin silencing at rDNA || negative regulation of chromatin silencing || regulation of cellular biosynthetic process || regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA |
| Biological Process (BP) |
negative regulation of cellular process |
0.01394 |
0.9355 |
Moderately Informative |
INHERITED FROM: negative regulation of gene silencing || negative regulation of histone modification || negative regulation of protein modification process || negative regulation of osteoblast differentiation || negative regulation of chromatin silencing || negative regulation of histone methylation || negative regulation of chromosome organization || negative regulation of cellular metabolic process || negative regulation of chromatin silencing at rDNA || negative regulation of organelle organization |
| Biological Process (BP) |
single-organism developmental process |
1 |
0.7645 |
Moderately Informative |
INHERITED FROM: tube closure || retina development in camera-type eye || myeloid cell development || respiratory tube development || erythrocyte development || neural tube closure || blood vessel development || T cell differentiation || lung development || primary neural tube formation || myeloid cell differentiation || heart development || T cell differentiation in thymus || midbrain development || sprouting angiogenesis || erythrocyte differentiation || neural tube formation |
| Biological Process (BP) |
anatomical structure morphogenesis |
1 |
1.036 |
Moderately Informative |
INHERITED FROM: tube closure || primary neural tube formation || neural tube closure || sprouting angiogenesis || neural tube formation |
| Biological Process (BP) |
signal transduction |
1 |
0.9914 |
Moderately Informative |
INHERITED FROM: canonical Wnt receptor signaling pathway || Wnt receptor signaling pathway |
| Biological Process (BP) |
organ development |
0.7479 |
0.9355 |
Moderately Informative |
INHERITED FROM: retina development in camera-type eye || myeloid cell development || respiratory tube development || erythrocyte development || T cell differentiation || lung development || myeloid cell differentiation || heart development || T cell differentiation in thymus || midbrain development || erythrocyte differentiation |
| Biological Process (BP) |
macromolecule localization |
0.2625 |
1.046 |
Moderately Informative |
INHERITED FROM: mRNA transport || mRNA export from nucleus || RNA transport || establishment of RNA localization || RNA export from nucleus |
| Biological Process (BP) |
organic substance transport |
1 |
0.9747 |
Moderately Informative |
INHERITED FROM: mRNA transport || mRNA export from nucleus || nucleic acid transport || RNA transport || RNA export from nucleus |
| Biological Process (BP) |
regulation of developmental process |
1 |
1.155 |
Moderately Informative |
INHERITED FROM: negative regulation of osteoblast differentiation || regulation of osteoblast differentiation |
| Biological Process (BP) |
regulation of multicellular organismal process |
1 |
0.9666 |
Moderately Informative |
INHERITED FROM: negative regulation of osteoblast differentiation || regulation of osteoblast differentiation |
| Biological Process (BP) |
monocarboxylic acid metabolic process |
0.1451 |
1.155 |
Moderately Informative |
INHERITED FROM: carnitine biosynthetic process || carnitine metabolic process |
| Biological Process (BP) |
response to abiotic stimulus |
0.005418 |
1.108 |
Moderately Informative |
INHERITED FROM: response to decreased oxygen levels || response to hypoxia || response to karrikin |
| Biological Process (BP) |
oxidation-reduction process |
0.6407 |
1.237 |
Moderately Informative |
INHERITED FROM: oxidative RNA demethylation || oxidative demethylation |
| Biological Process (BP) |
immune system process |
1 |
1.076 |
Moderately Informative |
INHERITED FROM: erythrocyte homeostasis || myeloid leukocyte activation || macrophage activation || erythrocyte development || T cell differentiation || myeloid cell homeostasis || T cell differentiation in thymus || erythrocyte differentiation || myeloid cell differentiation || myeloid cell development |
| Biological Process (BP) |
homeostatic process |
0.9422 |
1.086 |
Moderately Informative |
INHERITED FROM: erythrocyte homeostasis || myeloid cell homeostasis || homeostasis of number of cells || erythrocyte development || erythrocyte differentiation |
| Biological Process (BP) |
positive regulation of metabolic process |
1 |
1.167 |
Moderately Informative |
INHERITED FROM: negative regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA || positive regulation of gene expression, epigenetic |
| Biological Process (BP) |
positive regulation of cellular process |
1 |
0.9066 |
Moderately Informative |
INHERITED FROM: negative regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA |
| Biological Process (BP) |
regulation of protein metabolic process |
1 |
1.119 |
Moderately Informative |
INHERITED FROM: regulation of histone modification || negative regulation of histone modification || negative regulation of protein modification process || regulation of histone methylation || negative regulation of histone methylation |
| Biological Process (BP) |
cell differentiation |
1 |
1.009 |
Moderately Informative |
INHERITED FROM: T cell differentiation || myeloid cell differentiation || myeloid cell development || erythrocyte development || T cell differentiation in thymus || erythrocyte differentiation |
| Biological Process (BP) |
nervous system development |
1 |
1.194 |
Moderately Informative |
INHERITED FROM: primary neural tube formation || neural tube closure || midbrain development || neural tube formation |
| Biological Process (BP) |
tissue development |
1 |
1.143 |
Moderately Informative |
INHERITED FROM: primary neural tube formation || neural tube closure || neural tube formation |
| Biological Process (BP) |
response to oxygen-containing compound |
0.02207 |
1.108 |
Moderately Informative |
INHERITED FROM: response to nitrate |
| Biological Process (BP) |
heterocycle biosynthetic process |
0.6576 |
0.9355 |
Moderately Informative |
INHERITED FROM: flavonoid biosynthetic process |
| Biological Process (BP) |
aromatic compound biosynthetic process |
0.7299 |
0.9747 |
Moderately Informative |
INHERITED FROM: phenylpropanoid biosynthetic process || flavonoid biosynthetic process |
| Biological Process (BP) |
organic cyclic compound biosynthetic process |
0.3044 |
0.8928 |
Moderately Informative |
INHERITED FROM: phenylpropanoid biosynthetic process || flavonoid biosynthetic process |
| Biological Process (BP) |
lipid biosynthetic process |
0.4626 |
1.18 |
Moderately Informative |
INHERITED FROM: isoprenoid biosynthetic process || gibberellin biosynthetic process |
| Biological Process (BP) |
RNA metabolic process |
1 |
1.086 |
Moderately Informative |
INHERITED FROM: tRNA processing || oxidative RNA demethylation |
| Biological Process (BP) |
gene expression |
1 |
0.8729 |
Moderately Informative |
INHERITED FROM: tRNA processing |
| Biological Process (BP) |
reproduction |
0.8741 |
1.097 |
Moderately Informative |
INHERITED FROM: spermatogenesis || vegetative to reproductive phase transition of meristem || male gamete generation |
| Biological Process (BP) |
cellular lipid metabolic process |
0.5364 |
0.9747 |
Moderately Informative |
INHERITED FROM: isoprenoid metabolic process || isoprenoid biosynthetic process || diterpenoid metabolic process || gibberellin metabolic process || gibberellin biosynthetic process || terpenoid metabolic process |
| Biological Process (BP) |
cellular nitrogen compound biosynthetic process |
0.7091 |
0.9136 |
Moderately Informative |
INHERITED FROM: amino-acid betaine biosynthetic process || carnitine biosynthetic process |
| Biological Process (BP) |
cellular localization |
1 |
1.027 |
Moderately Informative |
INHERITED FROM: mRNA export from nucleus || RNA export from nucleus || nuclear export |
| Biological Process (BP) |
cellular response to stress |
0.002274 |
1.086 |
Moderately Informative |
INHERITED FROM: DNA dealkylation involved in DNA repair |
| Biological Process (BP) |
system process |
1 |
1.131 |
Moderately Informative |
INHERITED FROM: heart process || cardiac muscle contraction || muscle system process || striated muscle contraction || cardiac muscle cell contraction || heart contraction |
| Biological Process (BP) |
muscle system process |
2.738e-05 |
1.745 |
Informative |
DIRECT |
| Biological Process (BP) |
isoprenoid metabolic process |
1.84e-13 |
1.658 |
Informative |
DIRECT |
| Biological Process (BP) |
negative regulation of cellular metabolic process |
3.892e-05 |
1.301 |
Informative |
DIRECT |
| Biological Process (BP) |
chromosome organization |
0 |
1.62 |
Informative |
DIRECT |
| Biological Process (BP) |
cardiovascular system development |
4.191e-06 |
1.444 |
Informative |
DIRECT |
| Biological Process (BP) |
organic hydroxy compound biosynthetic process |
2.745e-12 |
1.699 |
Informative |
DIRECT |
| Biological Process (BP) |
negative regulation of cellular component organization |
0.04353 |
1.62 |
Informative |
INHERITED FROM: negative regulation of chromosome organization || negative regulation of histone methylation || negative regulation of organelle organization || negative regulation of histone modification |
| Biological Process (BP) |
regulation of organelle organization |
0.03002 |
1.495 |
Informative |
INHERITED FROM: negative regulation of chromosome organization || regulation of histone methylation || regulation of histone modification || regulation of chromosome organization || negative regulation of histone methylation || negative regulation of organelle organization || negative regulation of histone modification |
| Biological Process (BP) |
cellular component movement |
1 |
1.398 |
Informative |
INHERITED FROM: actin-mediated cell contraction || actin filament-based movement || cardiac muscle cell contraction |
| Biological Process (BP) |
tube development |
0.02312 |
1.62 |
Informative |
INHERITED FROM: tube closure || respiratory tube development || primary neural tube formation || neural tube closure || lung development || neural tube formation |
| Biological Process (BP) |
anatomical structure formation involved in morphogenesis |
0.5655 |
1.444 |
Informative |
INHERITED FROM: tube closure || neural tube closure || sprouting angiogenesis || primary neural tube formation || neural tube formation |
| Biological Process (BP) |
blood circulation |
0.00626 |
1.745 |
Informative |
INHERITED FROM: cardiac muscle contraction || cardiac muscle cell contraction || heart contraction |
| Biological Process (BP) |
sensory organ development |
0.21 |
1.553 |
Informative |
INHERITED FROM: retina development in camera-type eye |
| Biological Process (BP) |
nitrogen compound transport |
0.02016 |
1.377 |
Informative |
INHERITED FROM: mRNA transport || mRNA export from nucleus || nucleic acid transport || RNA transport || RNA export from nucleus |
| Biological Process (BP) |
negative regulation of developmental process |
1 |
1.699 |
Informative |
INHERITED FROM: negative regulation of osteoblast differentiation |
| Biological Process (BP) |
monocarboxylic acid biosynthetic process |
0.001108 |
1.523 |
Informative |
INHERITED FROM: carnitine biosynthetic process |
| Biological Process (BP) |
cell cycle process |
0.9996 |
1.377 |
Informative |
INHERITED FROM: mitotic cell cycle phase transition || cell cycle phase transition |
| Biological Process (BP) |
vesicle-mediated transport |
1 |
1.495 |
Informative |
INHERITED FROM: recognition of apoptotic cell || phagocytosis || apoptotic cell clearance || phagocytosis, recognition |
| Biological Process (BP) |
cellular ketone metabolic process |
0.093 |
1.658 |
Informative |
INHERITED FROM: ketone biosynthetic process || flavonoid metabolic process || flavonoid biosynthetic process |
| Biological Process (BP) |
RNA modification |
0.007667 |
1.62 |
Informative |
INHERITED FROM: oxidative RNA demethylation |
| Biological Process (BP) |
DNA metabolic process |
1 |
1.268 |
Informative |
INHERITED FROM: DNA dealkylation || DNA dealkylation involved in DNA repair || DNA modification || DNA demethylation |
| Biological Process (BP) |
positive regulation of gene expression |
1 |
1.699 |
Informative |
INHERITED FROM: negative regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA || positive regulation of gene expression, epigenetic |
| Biological Process (BP) |
positive regulation of macromolecule biosynthetic process |
1 |
1.585 |
Informative |
INHERITED FROM: negative regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA |
| Biological Process (BP) |
positive regulation of cellular biosynthetic process |
1 |
1.495 |
Informative |
INHERITED FROM: negative regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA |
| Biological Process (BP) |
positive regulation of nitrogen compound metabolic process |
1 |
1.523 |
Informative |
INHERITED FROM: negative regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA |
| Biological Process (BP) |
negative regulation of protein metabolic process |
0.496 |
1.523 |
Informative |
INHERITED FROM: negative regulation of histone methylation || negative regulation of histone modification || negative regulation of protein modification process |
| Biological Process (BP) |
central nervous system development |
0.3576 |
1.523 |
Informative |
INHERITED FROM: midbrain development |
| Biological Process (BP) |
hematopoietic or lymphoid organ development |
0.05122 |
1.585 |
Informative |
INHERITED FROM: erythrocyte differentiation || myeloid cell differentiation || myeloid cell development || T cell differentiation || T cell differentiation in thymus || erythrocyte development |
| Biological Process (BP) |
cell activation |
0.4178 |
1.495 |
Informative |
INHERITED FROM: T cell differentiation || T cell differentiation in thymus || myeloid leukocyte activation || macrophage activation |
| Biological Process (BP) |
actin filament-based process |
0.8021 |
1.495 |
Informative |
INHERITED FROM: actin filament-based movement || actin-mediated cell contraction || cardiac muscle cell contraction |
| Biological Process (BP) |
peptidyl-amino acid modification |
0.772 |
1.377 |
Informative |
INHERITED FROM: peptidyl-lysine modification || peptidyl-aspartic acid modification || peptidyl-lysine hydroxylation || peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine |
| Biological Process (BP) |
embryonic morphogenesis |
1 |
1.62 |
Informative |
INHERITED FROM: primary neural tube formation || neural tube closure || neural tube formation |
| Biological Process (BP) |
tissue morphogenesis |
0.9958 |
1.585 |
Informative |
INHERITED FROM: primary neural tube formation || neural tube closure || neural tube formation |
| Biological Process (BP) |
developmental process involved in reproduction |
0.5964 |
1.469 |
Informative |
INHERITED FROM: vegetative to reproductive phase transition of meristem |
| Biological Process (BP) |
reproductive system development |
0.2392 |
1.658 |
Informative |
INHERITED FROM: vegetative to reproductive phase transition of meristem |
| Biological Process (BP) |
response to inorganic substance |
0.1172 |
1.42 |
Informative |
INHERITED FROM: response to nitrate |
| Biological Process (BP) |
tRNA metabolic process |
0.001711 |
1.699 |
Informative |
INHERITED FROM: tRNA processing |
| Biological Process (BP) |
ncRNA processing |
0.1177 |
1.553 |
Informative |
INHERITED FROM: tRNA processing |
| Biological Process (BP) |
sexual reproduction |
0.2473 |
1.469 |
Informative |
INHERITED FROM: spermatogenesis || male gamete generation |
| Biological Process (BP) |
single organism reproductive process |
0.3809 |
1.377 |
Informative |
INHERITED FROM: spermatogenesis || male gamete generation |
| Biological Process (BP) |
multicellular organismal reproductive process |
0.1456 |
1.337 |
Informative |
INHERITED FROM: spermatogenesis || male gamete generation |
| Biological Process (BP) |
nucleocytoplasmic transport |
0.03267 |
1.658 |
Informative |
INHERITED FROM: mRNA export from nucleus || RNA export from nucleus || nuclear export |
| Biological Process (BP) |
cytoplasmic transport |
0.4981 |
1.337 |
Informative |
INHERITED FROM: mRNA export from nucleus || RNA export from nucleus || nuclear export |
| Biological Process (BP) |
response to DNA damage stimulus |
0.02436 |
1.495 |
Informative |
INHERITED FROM: DNA dealkylation involved in DNA repair |
| Biological Process (BP) |
epithelium development |
1 |
1.377 |
Informative |
INHERITED FROM: neural tube closure || primary neural tube formation || neural tube formation |
| Biological Process (BP) |
chordate embryonic development |
0.00324 |
1.495 |
Informative |
INHERITED FROM: neural tube closure || neural tube formation || primary neural tube formation |
| Biological Process (BP) |
response to hypoxia |
0.0001227 |
1.854 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
myeloid leukocyte activation |
2.879e-06 |
2 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
RNA export from nucleus |
2.962e-05 |
1.921 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
amino-acid betaine metabolic process |
3.171e-12 |
2.222 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
phagocytosis |
0.000135 |
2 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
striated muscle contraction |
0.0002057 |
2.097 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
spermatogenesis |
0.0004268 |
1.854 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
isoprenoid biosynthetic process |
0.0008415 |
2.097 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
phenylpropanoid metabolic process |
7.631e-06 |
2.097 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
histone modification |
0 |
1.854 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
peptidyl-lysine modification |
4.34e-05 |
2 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
actin filament-based movement |
4.736e-06 |
2.222 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
erythrocyte differentiation |
3.548e-06 |
2.097 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
lung development |
0.0005339 |
1.921 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
negative regulation of protein modification process |
0.000239 |
1.854 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
cell cycle phase transition |
3.174e-05 |
2 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
mRNA transport |
5.353e-06 |
2.222 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
retina development in camera-type eye |
0.0003567 |
2.097 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
heart contraction |
1.135e-07 |
2 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
DNA methylation or demethylation |
0.4419 |
2.097 |
Highly Informative |
INHERITED FROM: DNA demethylation |
| Biological Process (BP) |
mitotic cell cycle |
0.01348 |
1.854 |
Highly Informative |
INHERITED FROM: mitotic cell cycle phase transition |
| Biological Process (BP) |
protein methylation |
0.479 |
2.097 |
Highly Informative |
INHERITED FROM: histone lysine methylation |
| Biological Process (BP) |
regulation of gene expression, epigenetic |
0.01692 |
2.097 |
Highly Informative |
INHERITED FROM: negative regulation of chromatin silencing || negative regulation of chromatin silencing at rDNA || positive regulation of gene expression, epigenetic || DNA demethylation |
| Biological Process (BP) |
lymphocyte differentiation |
0.001452 |
1.854 |
Highly Informative |
INHERITED FROM: T cell differentiation || T cell differentiation in thymus |
| Biological Process (BP) |
T cell activation |
0.002966 |
2 |
Highly Informative |
INHERITED FROM: T cell differentiation || T cell differentiation in thymus |
| Biological Process (BP) |
post-embryonic development |
0.7549 |
1.796 |
Highly Informative |
INHERITED FROM: vegetative to reproductive phase transition of meristem |
| Biological Process (BP) |
secondary metabolite biosynthetic process |
0.01549 |
2.097 |
Highly Informative |
INHERITED FROM: phenylpropanoid biosynthetic process || flavonoid biosynthetic process |
| Biological Process (BP) |
DNA repair |
0.004841 |
1.796 |
Highly Informative |
INHERITED FROM: DNA dealkylation involved in DNA repair |
| Biological Process (BP) |
angiogenesis |
0.003847 |
1.921 |
Highly Informative |
INHERITED FROM: sprouting angiogenesis |
| Biological Process (BP) |
tube formation |
0.003057 |
2.222 |
Highly Informative |
INHERITED FROM: neural tube closure || neural tube formation || tube closure || primary neural tube formation |
| Biological Process (BP) |
morphogenesis of embryonic epithelium |
0.02763 |
2 |
Highly Informative |
INHERITED FROM: neural tube closure || neural tube formation || primary neural tube formation |
| Biological Process (BP) |
epithelial tube morphogenesis |
0.2959 |
1.854 |
Highly Informative |
INHERITED FROM: neural tube closure || neural tube formation || primary neural tube formation |
| Molecular Function (MF) |
regulatory region DNA binding |
0.0005558 |
2.377 |
-- |
DIRECT |
| Molecular Function (MF) |
transcription regulatory region sequence-specific DNA binding |
1.92e-07 |
2.679 |
-- |
DIRECT |
| Molecular Function (MF) |
RNA polymerase II regulatory region DNA binding |
3.05e-05 |
2.679 |
-- |
DIRECT |
| Molecular Function (MF) |
regulatory region nucleic acid binding |
0.0004013 |
2.377 |
-- |
DIRECT |
| Molecular Function (MF) |
catalytic activity |
0 |
0.2686 |
-- |
DIRECT |
| Molecular Function (MF) |
1-aminocyclopropane-1-carboxylate oxidase activity |
0 |
2.679 |
-- |
DIRECT |
| Molecular Function (MF) |
oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor |
7.973e-16 |
2.377 |
-- |
DIRECT |
| Molecular Function (MF) |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxyge |
0 |
2.679 |
-- |
DIRECT |
| Molecular Function (MF) |
demethylase activity |
0 |
2.679 |
-- |
DIRECT |
| Molecular Function (MF) |
oxidative RNA demethylase activity |
5.507e-10 |
2.679 |
-- |
DIRECT |
| Molecular Function (MF) |
histone binding |
2.437e-12 |
2.377 |
-- |
DIRECT |
| Molecular Function (MF) |
ion binding |
1.008e-11 |
0.8334 |
-- |
DIRECT |
| Molecular Function (MF) |
sequence-specific DNA binding |
0.0002374 |
2.679 |
-- |
DIRECT |
| Molecular Function (MF) |
transcription regulatory region DNA binding |
7.716e-06 |
2.377 |
-- |
DIRECT |
| Molecular Function (MF) |
metal ion binding |
0 |
1.134 |
-- |
DIRECT |
| Molecular Function (MF) |
cytosine C-5 DNA demethylase activity |
0 |
2.679 |
-- |
DIRECT |
| Molecular Function (MF) |
DNA demethylase activity |
0.7136 |
2.679 |
-- |
INHERITED FROM: cytosine C-5 DNA demethylase activity |
| Molecular Function (MF) |
oxidoreductase activity, acting on the CH-NH2 group of donors |
0.0208 |
2.377 |
-- |
INHERITED FROM: oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor || 1-aminocyclopropane-1-carboxylate oxidase activity |
| Molecular Function (MF) |
molecular_function |
0.2522 |
0 |
-- |
INHERITED FROM: RNA polymerase II core promoter proximal region sequence-specific DNA binding || cytosine C-5 DNA demethylase activity || dioxygenase activity || cation binding || chromatin binding || nuclear hormone receptor binding || transition metal ion binding || sequence-specific DNA binding || oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxyge || methylated histone residue binding || transcription regulatory region DNA binding || oxidative RNA demethylase activity || demethylase activity || 1-aminocyclopropane-1-carboxylate oxidase activity || regulatory region DNA binding || histone binding || catalytic activity || core promoter proximal region sequence-specific DNA binding || core promoter proximal region DNA binding || ion binding || oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxyge || regulatory region nucleic acid binding || hormone receptor binding || RNA polymerase II regulatory region DNA binding || oxidoreductase activity || metal ion binding || oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor || single-stranded RNA binding || iron ion binding || transcription regulatory region sequence-specific DNA binding |
| Molecular Function (MF) |
nucleic acid binding |
0.00304 |
1.11 |
-- |
INHERITED FROM: RNA polymerase II core promoter proximal region sequence-specific DNA binding || sequence-specific DNA binding || core promoter proximal region DNA binding || transcription regulatory region sequence-specific DNA binding || single-stranded RNA binding || regulatory region nucleic acid binding || core promoter proximal region sequence-specific DNA binding || transcription regulatory region DNA binding || regulatory region DNA binding || RNA polymerase II regulatory region DNA binding |
| Molecular Function (MF) |
RNA polymerase II regulatory region sequence-specific DNA binding |
0.09183 |
2.679 |
-- |
INHERITED FROM: RNA polymerase II core promoter proximal region sequence-specific DNA binding |
| Molecular Function (MF) |
hydrolase activity |
1 |
0.6657 |
Least Informative |
INHERITED FROM: cytosine C-5 DNA demethylase activity |
| Molecular Function (MF) |
binding |
0.7675 |
0.3952 |
Least Informative |
INHERITED FROM: RNA polymerase II core promoter proximal region sequence-specific DNA binding || metal ion binding || transcription regulatory region DNA binding || cation binding || sequence-specific DNA binding || single-stranded RNA binding || core promoter proximal region sequence-specific DNA binding || regulatory region DNA binding || iron ion binding || ion binding || core promoter proximal region DNA binding || histone binding || chromatin binding || regulatory region nucleic acid binding || methylated histone residue binding || transcription regulatory region sequence-specific DNA binding || hormone receptor binding || nuclear hormone receptor binding || RNA polymerase II regulatory region DNA binding || transition metal ion binding |
| Molecular Function (MF) |
oxidoreductase activity |
0 |
0.9883 |
Moderately Informative |
DIRECT |
| Molecular Function (MF) |
cation binding |
0 |
1.099 |
Moderately Informative |
DIRECT |
| Molecular Function (MF) |
protein binding |
1 |
0.77 |
Moderately Informative |
INHERITED FROM: histone binding || methylated histone residue binding || hormone receptor binding || nuclear hormone receptor binding |
| Molecular Function (MF) |
organic cyclic compound binding |
0.244 |
0.846 |
Moderately Informative |
INHERITED FROM: RNA polymerase II core promoter proximal region sequence-specific DNA binding || sequence-specific DNA binding || core promoter proximal region DNA binding || transcription regulatory region sequence-specific DNA binding || single-stranded RNA binding || regulatory region nucleic acid binding || core promoter proximal region sequence-specific DNA binding || transcription regulatory region DNA binding || regulatory region DNA binding || RNA polymerase II regulatory region DNA binding |
| Molecular Function (MF) |
heterocyclic compound binding |
0.206 |
0.8932 |
Moderately Informative |
INHERITED FROM: RNA polymerase II core promoter proximal region sequence-specific DNA binding || sequence-specific DNA binding || core promoter proximal region DNA binding || transcription regulatory region sequence-specific DNA binding || single-stranded RNA binding || regulatory region nucleic acid binding || core promoter proximal region sequence-specific DNA binding || transcription regulatory region DNA binding || regulatory region DNA binding || RNA polymerase II regulatory region DNA binding |
| Molecular Function (MF) |
transition metal ion binding |
9.895e-14 |
1.317 |
Informative |
DIRECT |
| Molecular Function (MF) |
receptor binding |
0.8457 |
1.565 |
Informative |
INHERITED FROM: hormone receptor binding || nuclear hormone receptor binding |
| Molecular Function (MF) |
RNA binding |
1 |
1.4 |
Informative |
INHERITED FROM: single-stranded RNA binding |
| Molecular Function (MF) |
DNA binding |
0.2239 |
1.423 |
Informative |
INHERITED FROM: RNA polymerase II core promoter proximal region sequence-specific DNA binding || core promoter proximal region sequence-specific DNA binding || transcription regulatory region DNA binding || regulatory region DNA binding || RNA polymerase II regulatory region DNA binding || sequence-specific DNA binding || core promoter proximal region DNA binding || transcription regulatory region sequence-specific DNA binding |
| Molecular Function (MF) |
chromatin binding |
9.798e-05 |
1.775 |
Highly Informative |
DIRECT |
| Molecular Function (MF) |
iron ion binding |
0 |
1.9 |
Highly Informative |
DIRECT |
| Molecular Function (MF) |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxyge |
0 |
1.775 |
Highly Informative |
DIRECT |
| Molecular Function (MF) |
dioxygenase activity |
0 |
1.98 |
Highly Informative |
DIRECT |
| Cellular Component (CC) |
nucleus |
4.867e-14 |
0.7857 |
-- |
DIRECT |
| Cellular Component (CC) |
membrane-enclosed lumen |
3.877e-07 |
0.9395 |
-- |
DIRECT |
| Cellular Component (CC) |
nuclear lumen |
6.478e-05 |
1.161 |
-- |
DIRECT |
| Cellular Component (CC) |
methyltransferase complex |
7.043e-08 |
2.542 |
-- |
DIRECT |
| Cellular Component (CC) |
histone methyltransferase complex |
2.425e-05 |
2.542 |
-- |
DIRECT |
| Cellular Component (CC) |
organelle lumen |
2.055e-07 |
1.023 |
-- |
DIRECT |
| Cellular Component (CC) |
macromolecular complex |
1 |
0.4276 |
-- |
INHERITED FROM: histone methyltransferase complex || methyltransferase complex || PcG protein complex |
| Cellular Component (CC) |
nucleoplasm |
0.01318 |
1.337 |
-- |
INHERITED FROM: histone methyltransferase complex |
| Cellular Component (CC) |
cellular_component |
0.8359 |
0 |
-- |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || nuclear euchromatin || nuclear part || methyltransferase complex || PcG protein complex || histone methyltransferase complex || organelle lumen || nuclear lumen || membrane-enclosed lumen || chromatin || nucleus |
| Cellular Component (CC) |
cell |
1 |
0.08068 |
-- |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || nuclear euchromatin || nuclear part || methyltransferase complex || PcG protein complex || histone methyltransferase complex || nuclear lumen || chromatin || nucleus |
| Cellular Component (CC) |
cell part |
1 |
0.08068 |
-- |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || nuclear euchromatin || nuclear part || methyltransferase complex || PcG protein complex || histone methyltransferase complex || nuclear lumen || chromatin || nucleus |
| Cellular Component (CC) |
organelle |
0.4177 |
0.1836 |
-- |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || nuclear euchromatin || histone methyltransferase complex || organelle lumen || nuclear lumen || nuclear part || PcG protein complex || chromatin || nucleus |
| Cellular Component (CC) |
organelle part |
1 |
0.3713 |
-- |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || nuclear euchromatin || histone methyltransferase complex || organelle lumen || nuclear lumen || nuclear part || PcG protein complex || chromatin |
| Cellular Component (CC) |
intracellular |
1 |
0.1266 |
-- |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || nuclear euchromatin || histone methyltransferase complex || nuclear lumen || nuclear part || methyltransferase complex || PcG protein complex || chromatin || nucleus |
| Cellular Component (CC) |
intracellular part |
1 |
0.1266 |
-- |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || nuclear euchromatin || histone methyltransferase complex || nuclear lumen || nuclear part || methyltransferase complex || PcG protein complex || chromatin || nucleus |
| Cellular Component (CC) |
intracellular organelle |
0.3962 |
0.1875 |
-- |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || nuclear euchromatin || histone methyltransferase complex || nuclear lumen || nuclear part || PcG protein complex || chromatin || nucleus |
| Cellular Component (CC) |
membrane-bounded organelle |
0.02001 |
0.2912 |
-- |
INHERITED FROM: nuclear chromatin || nuclear euchromatin || histone methyltransferase complex || nuclear lumen || nuclear part || PcG protein complex || nucleus |
| Cellular Component (CC) |
non-membrane-bounded organelle |
1 |
0.6225 |
-- |
INHERITED FROM: nuclear chromatin || nuclear euchromatin || chromatin |
| Cellular Component (CC) |
chromosomal part |
0.00251 |
1.587 |
-- |
INHERITED FROM: nuclear chromatin || nuclear euchromatin || chromatin |
| Cellular Component (CC) |
nuclear chromosome |
0.009396 |
2.064 |
-- |
INHERITED FROM: nuclear chromatin || nuclear euchromatin |
| Cellular Component (CC) |
protein complex |
1 |
0.5639 |
Least Informative |
INHERITED FROM: histone methyltransferase complex || methyltransferase complex || PcG protein complex |
| Cellular Component (CC) |
intracellular organelle part |
0.9305 |
0.3893 |
Least Informative |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || nuclear euchromatin || histone methyltransferase complex || nuclear lumen || nuclear part || PcG protein complex || chromatin |
| Cellular Component (CC) |
intracellular membrane-bounded organelle |
0.018 |
0.2961 |
Least Informative |
INHERITED FROM: nuclear chromatin || nuclear euchromatin || histone methyltransferase complex || nuclear lumen || nuclear part || PcG protein complex || nucleus |
| Cellular Component (CC) |
intracellular non-membrane-bounded organelle |
1 |
0.6225 |
Least Informative |
INHERITED FROM: nuclear chromatin || nuclear euchromatin || chromatin |
| Cellular Component (CC) |
nuclear part |
0.0007796 |
0.9505 |
Moderately Informative |
DIRECT |
| Cellular Component (CC) |
intracellular organelle lumen |
1.618e-07 |
1.023 |
Moderately Informative |
DIRECT |
| Cellular Component (CC) |
nucleoplasm part |
0.07441 |
1.337 |
Informative |
INHERITED FROM: histone methyltransferase complex |
| Cellular Component (CC) |
chromosome |
0.01104 |
1.462 |
Informative |
INHERITED FROM: nuclear chromatin || nuclear euchromatin || chromatin |
| Cellular Component (CC) |
chromatin |
2.004e-06 |
2.064 |
Highly Informative |
DIRECT |
| Cellular Component (CC) |
nuclear chromosome part |
0.003354 |
2.064 |
Highly Informative |
INHERITED FROM: nuclear chromatin || nuclear euchromatin |
0
