SUPERFAMILY 1.75 HMM library and genome assignments server


UDP-Glycosyltransferase/glycogen phosphorylase superfamily

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Alpha and beta proteins (a/b) [ 51349] (147)
Fold:   UDP-Glycosyltransferase/glycogen phosphorylase [ 53755]
Superfamily:   UDP-Glycosyltransferase/glycogen phosphorylase [ 53756] (11)
Families:   beta-Glucosyltransferase (DNA-modifying) [ 53757]
  Peptidoglycan biosynthesis glycosyltransferase MurG [ 53760]
  UDP-N-acetylglucosamine 2-epimerase [ 53763]
  Gtf glycosyltransferase [ 64178] (3)
  ADP-heptose LPS heptosyltransferase II [ 89784]
  Trehalose-6-phosphate synthase, OtsA [ 82540]
  Oligosaccharide phosphorylase [ 53766] (2)
  Glycosyl transferases group 1 [ 110734] (3)
  Sialyltransferase-like [ 142773]
  UDPGT-like [ 159785] (4)
  FucT-like [ 159794]


Superfamily statistics
Genomes (3,100) Uniprot 2013_05 PDB chains (SCOP 1.75)
Domains 76,373 154,827 44
Proteins 74,659 152,701 44


Functional annotation
General category Metabolism
Detailed category Polysaccharide metabolism and transport

Document:
Function annotation of SCOP domain superfamilies

Gene Ontology (high-quality)

(show details)
GO termFDR (singleton)FDR (all)SDFO levelAnnotation (direct or inherited)
Biological Process (BP)biosynthetic process00Least InformativeDirect
Biological Process (BP)single-organism metabolic process2.295e-080Least InformativeDirect
Biological Process (BP)response to stimulus0.018290.9519Least InformativeInherited
Biological Process (BP)single-organism cellular process11Least InformativeInherited
Biological Process (BP)cellular macromolecule metabolic process0.77381Least InformativeInherited
Biological Process (BP)protein metabolic process11Least InformativeInherited
Biological Process (BP)heterocycle metabolic process11Least InformativeInherited
Biological Process (BP)cellular aromatic compound metabolic process11Least InformativeInherited
Biological Process (BP)organic cyclic compound metabolic process11Least InformativeInherited
Biological Process (BP)carbohydrate metabolic process00Moderately InformativeDirect
Biological Process (BP)lipid biosynthetic process1.273e-101.431e-14Moderately InformativeDirect
Biological Process (BP)response to abiotic stimulus0.00037999.704e-08Moderately InformativeDirect
Biological Process (BP)cellular macromolecule biosynthetic process01.086e-14Moderately InformativeDirect
Biological Process (BP)cellular lipid metabolic process00Moderately InformativeDirect
Biological Process (BP)carbohydrate derivative metabolic process00Moderately InformativeDirect
Biological Process (BP)response to organic substance0.77870.8305Moderately InformativeInherited
Biological Process (BP)cellular response to chemical stimulus0.0027120.2868Moderately InformativeInherited
Biological Process (BP)response to endogenous stimulus0.061570.6872Moderately InformativeInherited
Biological Process (BP)response to oxygen-containing compound0.16040.002282Moderately InformativeInherited
Biological Process (BP)monocarboxylic acid metabolic process6.879e-060.001722Moderately InformativeInherited
Biological Process (BP)cellular response to stress0.12350.6667Moderately InformativeInherited
Biological Process (BP)cellular protein modification process2.767e-050.4879Moderately InformativeInherited
Biological Process (BP)cellular catabolic process11Moderately InformativeInherited
Biological Process (BP)polysaccharide metabolic process2.643e-140InformativeDirect
Biological Process (BP)membrane lipid metabolic process3.098e-110InformativeDirect
Biological Process (BP)regulation of hormone levels2.826e-071.162e-05InformativeDirect
Biological Process (BP)carbohydrate biosynthetic process6.097e-140InformativeDirect
Biological Process (BP)pigment metabolic process2.079e-060.0001137InformativeDirect
Biological Process (BP)cellular carbohydrate metabolic process00InformativeDirect
Biological Process (BP)response to hormone stimulus0.0029010.08383InformativeInherited
Biological Process (BP)response to lipid0.16170.4645InformativeInherited
Biological Process (BP)cellular response to endogenous stimulus0.080070.4613InformativeInherited
Biological Process (BP)response to organic cyclic compound0.00041820.007844InformativeInherited
Biological Process (BP)cellular response to oxygen-containing compound0.58450.7134InformativeInherited
Biological Process (BP)hexose metabolic process11InformativeInherited
Biological Process (BP)carbohydrate catabolic process10.09197InformativeInherited
Biological Process (BP)peptidyl-amino acid modification0.66840.7885InformativeInherited
Biological Process (BP)glycosyl compound biosynthetic process0.26040.2329InformativeInherited
Biological Process (BP)response to nutrient levels0.97621InformativeInherited
Biological Process (BP)secondary metabolic process0.0019310.3274InformativeInherited
Biological Process (BP)isoprenoid metabolic process11InformativeInherited
Biological Process (BP)retinoid metabolic process0.00087420.000198Highly InformativeDirect
Biological Process (BP)response to hypoxia0.00033721.086e-14Highly InformativeDirect
Biological Process (BP)protein glycosylation00Highly InformativeDirect
Biological Process (BP)xenobiotic metabolic process9.106e-101.47e-08Highly InformativeDirect
Biological Process (BP)lipopolysaccharide metabolic process8.515e-130Highly InformativeDirect
Biological Process (BP)glycolipid biosynthetic process3.505e-070Highly InformativeDirect
Biological Process (BP)oligosaccharide metabolic process1.342e-067.637e-08Highly InformativeDirect
Biological Process (BP)phenylpropanoid metabolic process1.561e-092.569e-08Highly InformativeDirect
Biological Process (BP)glycoside metabolic process1.226e-071.489e-09Highly InformativeDirect
Biological Process (BP)cellular polysaccharide biosynthetic process6.846e-070Highly InformativeDirect
Biological Process (BP)cellular hormone metabolic process5.152e-053.933e-05Highly InformativeDirect
Biological Process (BP)lipoprotein metabolic process6.434e-087.756e-08Highly InformativeDirect
Biological Process (BP)post-translational protein modification0.00066230.0001864Highly InformativeDirect
Biological Process (BP)cellular response to organic cyclic compound0.0055950.01683Highly InformativeInherited
Biological Process (BP)response to corticosteroid stimulus0.065230.01154Highly InformativeInherited
Biological Process (BP)response to ethanol0.01350.01681Highly InformativeInherited
Biological Process (BP)cellular response to alcohol4.323e-050.001056Highly InformativeInherited
Biological Process (BP)response to heat0.033220.001627Highly InformativeInherited
Biological Process (BP)cellular response to starvation0.017020.01065Highly InformativeInherited
Biological Process (BP)pigment biosynthetic process0.0034610.007257Highly InformativeInherited
Biological Process (BP)toxin metabolic process0.0029960.02396Highly InformativeInherited
Biological Process (BP)amino sugar metabolic process0.14860.01066Highly InformativeInherited
Molecular Function (MF)binding11Least InformativeInherited
Molecular Function (MF)isomerase activity11Moderately InformativeInherited
Molecular Function (MF)anion binding0.25680.3859Moderately InformativeInherited
Molecular Function (MF)transferase activity, transferring glycosyl groups00InformativeDirect
Molecular Function (MF)carboxylic acid binding6.254e-074.9e-07InformativeDirect
Molecular Function (MF)racemase and epimerase activity0.0044131.39e-05InformativeInherited
Molecular Function (MF)lipid binding0.00014890.002963InformativeInherited
Molecular Function (MF)UDP-glycosyltransferase activity1.324e-076.104e-08Highly InformativeDirect
Molecular Function (MF)transferase activity, transferring hexosyl groups3.893e-100Highly InformativeDirect
Molecular Function (MF)racemase and epimerase activity, acting on carbohydrates and derivatives0.00066064.22e-07Highly InformativeDirect
Molecular Function (MF)isoprenoid binding1.152e-082.199e-13Highly InformativeDirect
Molecular Function (MF)monocarboxylic acid binding3.888e-102.17e-12Highly InformativeDirect
Cellular Component (CC)cytoplasmic part11Least InformativeInherited
Cellular Component (CC)intracellular membrane-bounded organelle11Least InformativeInherited
Cellular Component (CC)intracellular organelle part0.98261Least InformativeInherited
Cellular Component (CC)membrane0.93551Least InformativeInherited
Cellular Component (CC)protein complex11Least InformativeInherited
Cellular Component (CC)endoplasmic reticulum1.489e-060.001299Moderately InformativeInherited
Cellular Component (CC)endomembrane system4.726e-050.01155Moderately InformativeInherited
Cellular Component (CC)organelle membrane0.00049510.0149Moderately InformativeInherited
Cellular Component (CC)endoplasmic reticulum membrane2.89e-098.069e-07InformativeDirect

Document: GO annotation of SCOP domains

Gene Ontology (high-coverage)

(show details)
GO term FDR (all) SDFO level Annotation (direct or inherited)
Biological Process (BP) biosynthetic process 0 Least Informative Direct
Biological Process (BP) single-organism metabolic process 0 Least Informative Direct
Biological Process (BP) response to stimulus 0.9519 Least Informative Inherited
Biological Process (BP) single-organism cellular process 1 Least Informative Inherited
Biological Process (BP) cellular component organization or biogenesis 1 Least Informative Inherited
Biological Process (BP) cellular macromolecule metabolic process 1 Least Informative Inherited
Biological Process (BP) developmental process 1 Least Informative Inherited
Biological Process (BP) protein metabolic process 1 Least Informative Inherited
Biological Process (BP) heterocycle metabolic process 1 Least Informative Inherited
Biological Process (BP) organic cyclic compound metabolic process 1 Least Informative Inherited
Biological Process (BP) cellular aromatic compound metabolic process 1 Least Informative Inherited
Biological Process (BP) carbohydrate metabolic process 0 Moderately Informative Direct
Biological Process (BP) lipid biosynthetic process 1.431e-14 Moderately Informative Direct
Biological Process (BP) response to abiotic stimulus 9.704e-08 Moderately Informative Direct
Biological Process (BP) cellular macromolecule biosynthetic process 1.086e-14 Moderately Informative Direct
Biological Process (BP) cellular lipid metabolic process 0 Moderately Informative Direct
Biological Process (BP) carbohydrate derivative metabolic process 0 Moderately Informative Direct
Biological Process (BP) response to organic substance 0.8305 Moderately Informative Inherited
Biological Process (BP) cellular response to chemical stimulus 0.2868 Moderately Informative Inherited
Biological Process (BP) response to endogenous stimulus 0.6872 Moderately Informative Inherited
Biological Process (BP) monocarboxylic acid metabolic process 0.001722 Moderately Informative Inherited
Biological Process (BP) single-organism biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) organic hydroxy compound metabolic process 0.2746 Moderately Informative Inherited
Biological Process (BP) cellular component biogenesis 1 Moderately Informative Inherited
Biological Process (BP) cellular response to stress 0.6667 Moderately Informative Inherited
Biological Process (BP) reproduction 1 Moderately Informative Inherited
Biological Process (BP) anatomical structure morphogenesis 1 Moderately Informative Inherited
Biological Process (BP) cell differentiation 1 Moderately Informative Inherited
Biological Process (BP) single-organism developmental process 1 Moderately Informative Inherited
Biological Process (BP) cellular protein modification process 0.4879 Moderately Informative Inherited
Biological Process (BP) response to oxygen-containing compound 0.002282 Moderately Informative Inherited
Biological Process (BP) cellular catabolic process 1 Moderately Informative Inherited
Biological Process (BP) macromolecule catabolic process 0.7531 Moderately Informative Inherited
Biological Process (BP) polysaccharide metabolic process 0 Informative Direct
Biological Process (BP) membrane lipid metabolic process 0 Informative Direct
Biological Process (BP) steroid metabolic process 0.0005625 Informative Direct
Biological Process (BP) regulation of hormone levels 1.162e-05 Informative Direct
Biological Process (BP) energy derivation by oxidation of organic compounds 0 Informative Direct
Biological Process (BP) carbohydrate biosynthetic process 0 Informative Direct
Biological Process (BP) pigment metabolic process 0.0001137 Informative Direct
Biological Process (BP) cellular carbohydrate metabolic process 0 Informative Direct
Biological Process (BP) response to hormone stimulus 0.08383 Informative Inherited
Biological Process (BP) response to lipid 0.4645 Informative Inherited
Biological Process (BP) cellular response to endogenous stimulus 0.4613 Informative Inherited
Biological Process (BP) response to organic cyclic compound 0.007844 Informative Inherited
Biological Process (BP) cellular response to oxygen-containing compound 0.7134 Informative Inherited
Biological Process (BP) cell death 1 Informative Inherited
Biological Process (BP) alcohol metabolic process 0.1555 Informative Inherited
Biological Process (BP) organic hydroxy compound biosynthetic process 0.8798 Informative Inherited
Biological Process (BP) isoprenoid metabolic process 1 Informative Inherited
Biological Process (BP) cell cycle process 1 Informative Inherited
Biological Process (BP) anatomical structure formation involved in morphogenesis 1 Informative Inherited
Biological Process (BP) sexual reproduction 1 Informative Inherited
Biological Process (BP) cellular process involved in reproduction 1 Informative Inherited
Biological Process (BP) hexose metabolic process 1 Informative Inherited
Biological Process (BP) carbohydrate catabolic process 0.09197 Informative Inherited
Biological Process (BP) peptidyl-amino acid modification 0.7885 Informative Inherited
Biological Process (BP) glycosyl compound biosynthetic process 0.2329 Informative Inherited
Biological Process (BP) response to nutrient levels 1 Informative Inherited
Biological Process (BP) response to light stimulus 0.3775 Informative Inherited
Biological Process (BP) response to inorganic substance 0.1429 Informative Inherited
Biological Process (BP) secondary metabolic process 0.3274 Informative Inherited
Biological Process (BP) retinoid metabolic process 0.000198 Highly Informative Direct
Biological Process (BP) response to hypoxia 1.086e-14 Highly Informative Direct
Biological Process (BP) energy reserve metabolic process 0 Highly Informative Direct
Biological Process (BP) protein glycosylation 0 Highly Informative Direct
Biological Process (BP) xenobiotic metabolic process 1.47e-08 Highly Informative Direct
Biological Process (BP) lipopolysaccharide metabolic process 0 Highly Informative Direct
Biological Process (BP) glycolipid biosynthetic process 0 Highly Informative Direct
Biological Process (BP) oligosaccharide metabolic process 7.637e-08 Highly Informative Direct
Biological Process (BP) response to water deprivation 1.706e-05 Highly Informative Direct
Biological Process (BP) phenylpropanoid metabolic process 2.569e-08 Highly Informative Direct
Biological Process (BP) response to carbohydrate stimulus 2.164e-05 Highly Informative Direct
Biological Process (BP) glycoside metabolic process 1.489e-09 Highly Informative Direct
Biological Process (BP) cellular polysaccharide biosynthetic process 0 Highly Informative Direct
Biological Process (BP) cellular hormone metabolic process 3.933e-05 Highly Informative Direct
Biological Process (BP) lipoprotein metabolic process 7.756e-08 Highly Informative Direct
Biological Process (BP) cell wall biogenesis 0.000201 Highly Informative Direct
Biological Process (BP) post-translational protein modification 0.0001864 Highly Informative Direct
Biological Process (BP) external encapsulating structure organization 0.0001009 Highly Informative Direct
Biological Process (BP) cellular response to organic cyclic compound 0.01683 Highly Informative Inherited
Biological Process (BP) response to corticosteroid stimulus 0.01154 Highly Informative Inherited
Biological Process (BP) response to ethanol 0.01681 Highly Informative Inherited
Biological Process (BP) cellular response to alcohol 0.001056 Highly Informative Inherited
Biological Process (BP) polyol metabolic process 0.5317 Highly Informative Inherited
Biological Process (BP) alcohol biosynthetic process 0.04621 Highly Informative Inherited
Biological Process (BP) response to heat 0.001627 Highly Informative Inherited
Biological Process (BP) cellular response to starvation 0.01065 Highly Informative Inherited
Biological Process (BP) response to UV 0.01114 Highly Informative Inherited
Biological Process (BP) pigment biosynthetic process 0.007257 Highly Informative Inherited
Biological Process (BP) toxin metabolic process 0.02396 Highly Informative Inherited
Biological Process (BP) amino sugar metabolic process 0.01066 Highly Informative Inherited
Biological Process (BP) polysaccharide catabolic process 0.001627 Highly Informative Inherited
Biological Process (BP) cellular carbohydrate catabolic process 0.05338 Highly Informative Inherited
Molecular Function (MF) hydrolase activity 1 Least Informative Inherited
Molecular Function (MF) binding 1 Least Informative Inherited
Molecular Function (MF) isomerase activity 1 Moderately Informative Inherited
Molecular Function (MF) hydrolase activity, acting on ester bonds 0.6422 Moderately Informative Inherited
Molecular Function (MF) anion binding 0.3859 Moderately Informative Inherited
Molecular Function (MF) transferase activity, transferring glycosyl groups 0 Informative Direct
Molecular Function (MF) racemase and epimerase activity 1.39e-05 Informative Direct
Molecular Function (MF) carboxylic acid binding 4.9e-07 Informative Direct
Molecular Function (MF) phosphatase activity 0.001525 Informative Inherited
Molecular Function (MF) lipid binding 0.002963 Informative Inherited
Molecular Function (MF) UDP-glycosyltransferase activity 6.104e-08 Highly Informative Direct
Molecular Function (MF) transferase activity, transferring hexosyl groups 0 Highly Informative Direct
Molecular Function (MF) racemase and epimerase activity, acting on carbohydrates and derivatives 4.22e-07 Highly Informative Direct
Molecular Function (MF) isoprenoid binding 2.199e-13 Highly Informative Direct
Molecular Function (MF) monocarboxylic acid binding 2.17e-12 Highly Informative Direct
Cellular Component (CC) cytoplasmic part 1 Least Informative Inherited
Cellular Component (CC) intracellular membrane-bounded organelle 1 Least Informative Inherited
Cellular Component (CC) intracellular organelle part 1 Least Informative Inherited
Cellular Component (CC) membrane 1 Least Informative Inherited
Cellular Component (CC) protein complex 1 Least Informative Inherited
Cellular Component (CC) endoplasmic reticulum 0.001299 Moderately Informative Inherited
Cellular Component (CC) endomembrane system 0.01155 Moderately Informative Inherited
Cellular Component (CC) organelle membrane 0.0149 Moderately Informative Inherited
Cellular Component (CC) endoplasmic reticulum membrane 8.069e-07 Informative Direct

Document: GO annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Isomerases1Least InformativeInherited
Enzyme Commission (EC)Glycosyltransferases0Moderately InformativeDirect
Enzyme Commission (EC)Racemases and epimerases0.4591Moderately InformativeInherited
Enzyme Commission (EC)Acting on carbohydrates and derivatives1.553e-05InformativeDirect

Document: EC annotation of SCOP domains

Disease Ontology (DO)

(show details)
DO termFDR (all)SDDO levelAnnotation (direct or inherited)
Disease Ontology (DO)disease of metabolism0.03028Moderately InformativeInherited

Document: DO annotation of SCOP domains

Worm Phenotype (WP)

(show details) Document: WP annotation of SCOP domains

Fly Anatomy (FA)

(show details)
FA termFDR (all)SDFA levelAnnotation (direct or inherited)
Fly Anatomy (FA)larva0Least InformativeDirect

Document: FA annotation of SCOP domains

Xenopus Anatomy (XA)

(show details) Document: XA annotation of SCOP domains

Arabidopsis Plant Ontology (AP)

(show details)
AP termFDR (all)SDAP levelAnnotation (direct or inherited)
Plant ANatomical entity (PAN)shoot axis0.8506Least InformativeInherited
Plant ANatomical entity (PAN)portion of meristem tissue1Least InformativeInherited
Plant ANatomical entity (PAN)root system1Least InformativeInherited
Plant ANatomical entity (PAN)cardinal part of multi-tissue plant structure1Least InformativeInherited
Plant ANatomical entity (PAN)primordium2.644e-08InformativeDirect
Plant ANatomical entity (PAN)root tip1.441e-05InformativeDirect
Plant ANatomical entity (PAN)vegetative shoot apex1.324e-11Highly InformativeDirect
Plant ANatomical entity (PAN)phyllome primordium2.034e-11Highly InformativeDirect
Plant ANatomical entity (PAN)lateral root primordium2.942e-05Highly InformativeDirect
Plant ANatomical entity (PAN)bud0.0005055Highly InformativeDirect

Document: AP annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEC levelAnnotation (direct or inherited)
Enzyme Commission (EC)Transferring phosphorous-containing groups1Least InformativeInherited
Enzyme Commission (EC)Hydrolases1Least InformativeInherited
Enzyme Commission (EC)Glycosyltransferases0Moderately InformativeDirect
Enzyme Commission (EC)Phosphotransferases with an alcohol group as acceptor1Moderately InformativeInherited
Enzyme Commission (EC)Phosphoric monoester hydrolases1Moderately InformativeInherited
Enzyme Commission (EC)Glycosylases1Moderately InformativeInherited
Enzyme Commission (EC)Isomerases1Moderately InformativeInherited
Enzyme Commission (EC)Hexosyltransferases0InformativeDirect
Enzyme Commission (EC)Racemases and epimerases0.92InformativeInherited
Enzyme Commission (EC)Acting on carbohydrates and derivatives0.0008174Highly InformativeDirect
Enzyme Commission (EC)Transferring other glycosyl groups1Highly InformativeInherited

Document: EC annotation of SCOP domains

UniProtKB KeyWords (KW)

(show details)
KW termFDR (all)SDKW levelAnnotation (direct or inherited)
Biological processCell cycle0Moderately InformativeDirect
Biological processLipid metabolism0Moderately InformativeDirect
Biological processCarbohydrate metabolism2.772e-15Moderately InformativeDirect
Biological processCell shape0InformativeDirect
Biological processLipid biosynthesis0InformativeDirect
Biological processCell wall biogenesis/degradation0InformativeDirect
Biological processSteroid metabolism0.0004651InformativeDirect
Biological processGlycogen biosynthesis0Highly InformativeDirect
Biological processLipid A biosynthesis0Highly InformativeDirect
Biological processLipopolysaccharide biosynthesis0Highly InformativeDirect
Biological processPeptidoglycan synthesis0Highly InformativeDirect
Biological processSterol biosynthesis0Highly InformativeDirect
Biological processAutophagy4.033e-12Highly InformativeDirect
Biological processDetoxification1.527e-05Highly InformativeDirect
Biological processSteroid biosynthesis0.0003112Highly InformativeDirect
Biological processAntibiotic biosynthesis0.0008947Highly InformativeDirect
Cellular componentMembrane0Least InformativeDirect
Cellular componentEndoplasmic reticulum0Moderately InformativeDirect
Cellular componentCell membrane0Moderately InformativeDirect
Cellular componentGolgi apparatus1.334e-11Moderately InformativeDirect
Cellular componentPlastid0.7879Moderately InformativeInherited
Cellular componentCell inner membrane0InformativeDirect
Cellular componentMicrosome2.342e-13Highly InformativeDirect
DomainTransmembrane0.3195Least InformativeInherited
DomainSignal-anchor0InformativeDirect
Post-translational modificationTransferase0Least InformativeDirect
Post-translational modificationGlycosyltransferase0InformativeDirect
Post-translational modificationGlycoprotein0.0005311Least InformativeDirect

Document: KW annotation of SCOP domains

UniProtKB UniPathway (UP)

(show details)
UP termFDR (all)SDUP levelAnnotation (direct or inherited)
UniPathway (UP)biopolymer metabolism4.278e-16Least InformativeDirect
UniPathway (UP)carbohydrate metabolism1Least InformativeInherited
UniPathway (UP)aromatic compound metabolism1Least InformativeInherited
UniPathway (UP)lipid metabolism1Least InformativeInherited
UniPathway (UP)glycan metabolism0Moderately InformativeDirect
UniPathway (UP)secondary metabolite metabolism0.2174Moderately InformativeInherited
UniPathway (UP)pigment metabolism0.2891Moderately InformativeInherited
UniPathway (UP)aromatic compound biosynthesis0.78Moderately InformativeInherited
UniPathway (UP)lipid biosynthesis1Moderately InformativeInherited
UniPathway (UP)amine and polyamine metabolism1Moderately InformativeInherited
UniPathway (UP)cellular component biogenesis1Moderately InformativeInherited
UniPathway (UP)membrane lipid metabolism1Moderately InformativeInherited
UniPathway (UP)protein glycosylation0InformativeDirect
UniPathway (UP)flavonoid metabolism0.002714InformativeInherited
UniPathway (UP)phenylpropanoid biosynthesis0.01971InformativeInherited
UniPathway (UP)pigment biosynthesis0.281InformativeInherited
UniPathway (UP)carbohydrate biosynthesis0.9889InformativeInherited
UniPathway (UP)glycolipid biosynthesis1InformativeInherited
UniPathway (UP)glycogen biosynthesis0Highly InformativeDirect
UniPathway (UP)amino-sugar biosynthesis2.504e-09Highly InformativeDirect
UniPathway (UP)anthocyanin biosynthesis5.08e-09Highly InformativeDirect
UniPathway (UP)sphingolipid biosynthesis8.533e-08Highly InformativeDirect
UniPathway (UP)glycosylphosphatidylinositol-anchor biosynthesis8.665e-05Highly InformativeDirect
UniPathway (UP)N-acetylneuraminate metabolism1Highly InformativeInherited

Document: UP annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Functional annotation · Gene Ontology (high-quality) · Gene Ontology (high-coverage) · Enzyme Commission (EC) · Disease Ontology (DO) · Worm Phenotype (WP) · Fly Anatomy (FA) · Xenopus Anatomy (XA) · Arabidopsis Plant Ontology (AP) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) · UniProtKB UniPathway (UP) ]

Internal database links

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


Alignments of sequences to 24 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Browse and view proteins in genomes which have different domain combinations including a UDP-Glycosyltransferase/glycogen phosphorylase domain.


Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Explore domain occurrence network where nodes represent genomes and edges are domain architectures (shared between genomes) containing the superfamily of interest.

There are 24 hidden Markov models representing the UDP-Glycosyltransferase/glycogen phosphorylase superfamily. Information on how the models are built, and plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be inspected.


Jump to [ Top of page · SCOP classification · Functional annotation · Gene Ontology (high-quality) · Gene Ontology (high-coverage) · Enzyme Commission (EC) · Disease Ontology (DO) · Worm Phenotype (WP) · Fly Anatomy (FA) · Xenopus Anatomy (XA) · Arabidopsis Plant Ontology (AP) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) · UniProtKB UniPathway (UP) · Internal database links ]