SUPERFAMILY 1.75 HMM library and genome assignments server


UDP-Glycosyltransferase/glycogen phosphorylase superfamily

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Alpha and beta proteins (a/b) [ 51349] (147)
Fold:   UDP-Glycosyltransferase/glycogen phosphorylase [ 53755]
Superfamily:   UDP-Glycosyltransferase/glycogen phosphorylase [ 53756] (11)
Families:   beta-Glucosyltransferase (DNA-modifying) [ 53757]
  Peptidoglycan biosynthesis glycosyltransferase MurG [ 53760]
  UDP-N-acetylglucosamine 2-epimerase [ 53763]
  Gtf glycosyltransferase [ 64178] (3)
  ADP-heptose LPS heptosyltransferase II [ 89784]
  Trehalose-6-phosphate synthase, OtsA [ 82540]
  Oligosaccharide phosphorylase [ 53766] (2)
  Glycosyl transferases group 1 [ 110734] (3)
  Sialyltransferase-like [ 142773]
  UDPGT-like [ 159785] (4)
  FucT-like [ 159794]


Superfamily statistics
Genomes (3,135) Uniprot 2014_06 PDB chains (SCOP 1.75)
Domains 81,087 322,989 44
Proteins 79,055 319,598 44


Functional annotation
General category Metabolism
Detailed category Polysaccharide metabolism and transport

Document:
Function annotation of SCOP domain superfamilies

Gene Ontology (high-quality)

(show details)
GO termFDR (singleton)FDR (all)SDFO levelAnnotation (direct or inherited)
Biological Process (BP)biosynthetic process00Least InformativeDirect
Biological Process (BP)single-organism metabolic process0.000000016550Least InformativeDirect
Biological Process (BP)response to stimulus0.012410.8952Least InformativeInherited
Biological Process (BP)single-organism cellular process11Least InformativeInherited
Biological Process (BP)cellular macromolecule metabolic process0.85741Least InformativeInherited
Biological Process (BP)protein metabolic process11Least InformativeInherited
Biological Process (BP)heterocycle metabolic process11Least InformativeInherited
Biological Process (BP)cellular aromatic compound metabolic process11Least InformativeInherited
Biological Process (BP)organic cyclic compound metabolic process11Least InformativeInherited
Biological Process (BP)carbohydrate metabolic process00Moderately InformativeDirect
Biological Process (BP)lipid biosynthetic process0.000000000012720Moderately InformativeDirect
Biological Process (BP)response to abiotic stimulus0.00053410.00000008238Moderately InformativeDirect
Biological Process (BP)cellular macromolecule biosynthetic process00.00000000000002766Moderately InformativeDirect
Biological Process (BP)cellular lipid metabolic process00Moderately InformativeDirect
Biological Process (BP)carbohydrate derivative metabolic process00Moderately InformativeDirect
Biological Process (BP)response to organic substance0.75980.8078Moderately InformativeInherited
Biological Process (BP)cellular response to chemical stimulus0.0027790.2663Moderately InformativeInherited
Biological Process (BP)response to endogenous stimulus0.061270.6671Moderately InformativeInherited
Biological Process (BP)response to oxygen-containing compound0.1630.002209Moderately InformativeInherited
Biological Process (BP)cellular response to stress0.1390.6524Moderately InformativeInherited
Biological Process (BP)organic substance catabolic process11Moderately InformativeInherited
Biological Process (BP)cellular protein modification process0.000010870.3968Moderately InformativeInherited
Biological Process (BP)cellular catabolic process11Moderately InformativeInherited
Biological Process (BP)monocarboxylic acid metabolic process0.0000044040.001115Moderately InformativeInherited
Biological Process (BP)polysaccharide metabolic process0.000000000000050840InformativeDirect
Biological Process (BP)membrane lipid metabolic process0.00000000020160InformativeDirect
Biological Process (BP)regulation of hormone levels0.00000022030.000009564InformativeDirect
Biological Process (BP)carbohydrate biosynthetic process0.00000000000014310InformativeDirect
Biological Process (BP)pigment metabolic process0.0000024580.0001236InformativeDirect
Biological Process (BP)cellular carbohydrate metabolic process00InformativeDirect
Biological Process (BP)response to hormone stimulus0.0027620.07939InformativeInherited
Biological Process (BP)response to lipid0.17530.4713InformativeInherited
Biological Process (BP)cellular response to endogenous stimulus0.083410.4517InformativeInherited
Biological Process (BP)response to organic cyclic compound0.0004620.007537InformativeInherited
Biological Process (BP)cellular response to oxygen-containing compound0.61910.7203InformativeInherited
Biological Process (BP)hexose metabolic process11InformativeInherited
Biological Process (BP)carbohydrate catabolic process10.1352InformativeInherited
Biological Process (BP)peptidyl-amino acid modification0.54390.6669InformativeInherited
Biological Process (BP)glycosyl compound biosynthetic process0.075530.0507InformativeInherited
Biological Process (BP)response to nutrient levels0.98271InformativeInherited
Biological Process (BP)secondary metabolic process0.002320.3391InformativeInherited
Biological Process (BP)isoprenoid metabolic process11InformativeInherited
Biological Process (BP)retinoid metabolic process0.00082270.0001997Highly InformativeDirect
Biological Process (BP)response to hypoxia0.00030020.000000000000007281Highly InformativeDirect
Biological Process (BP)protein glycosylation00Highly InformativeDirect
Biological Process (BP)xenobiotic metabolic process0.0000000011180.00000001391Highly InformativeDirect
Biological Process (BP)lipopolysaccharide metabolic process0.0000000000023010Highly InformativeDirect
Biological Process (BP)glycolipid biosynthetic process0.00000068140Highly InformativeDirect
Biological Process (BP)oligosaccharide metabolic process0.0000022280.0000001043Highly InformativeDirect
Biological Process (BP)phenylpropanoid metabolic process0.0000000012480.00000002298Highly InformativeDirect
Biological Process (BP)glycoside metabolic process0.000000000047610.00000000000009806Highly InformativeDirect
Biological Process (BP)cellular polysaccharide biosynthetic process0.00000056830Highly InformativeDirect
Biological Process (BP)cellular hormone metabolic process0.000062750.00004292Highly InformativeDirect
Biological Process (BP)lipoprotein metabolic process0.000000087870.00000007408Highly InformativeDirect
Biological Process (BP)post-translational protein modification0.00069690.0001804Highly InformativeDirect
Biological Process (BP)cellular response to steroid hormone stimulus0.00050040.000596Highly InformativeDirect
Biological Process (BP)response to corticosteroid stimulus0.056140.01121Highly InformativeInherited
Biological Process (BP)response to ethanol0.013290.01768Highly InformativeInherited
Biological Process (BP)cellular response to alcohol0.000037270.001034Highly InformativeInherited
Biological Process (BP)response to heat0.043770.001891Highly InformativeInherited
Biological Process (BP)cellular response to starvation0.017790.01031Highly InformativeInherited
Biological Process (BP)response to carbohydrate stimulus0.03670.00002067Highly InformativeInherited
Biological Process (BP)pigment biosynthetic process0.0036890.007055Highly InformativeInherited
Biological Process (BP)toxin metabolic process0.0032250.02449Highly InformativeInherited
Biological Process (BP)amino sugar metabolic process0.15280.009999Highly InformativeInherited
Molecular Function (MF)binding11Least InformativeInherited
Molecular Function (MF)isomerase activity11Moderately InformativeInherited
Molecular Function (MF)anion binding0.25960.4008Moderately InformativeInherited
Molecular Function (MF)transferase activity, transferring glycosyl groups00InformativeDirect
Molecular Function (MF)carboxylic acid binding0.00000046420.0000004055InformativeDirect
Molecular Function (MF)racemase and epimerase activity0.004150.00002217InformativeInherited
Molecular Function (MF)lipid binding0.00012350.002672InformativeInherited
Molecular Function (MF)UDP-glycosyltransferase activity0.000000043040.00000000372Highly InformativeDirect
Molecular Function (MF)transferase activity, transferring hexosyl groups0.00000000035240Highly InformativeDirect
Molecular Function (MF)racemase and epimerase activity, acting on carbohydrates and derivatives0.00063880.0000003779Highly InformativeDirect
Molecular Function (MF)isoprenoid binding0.000000010420.0000000000001765Highly InformativeDirect
Molecular Function (MF)monocarboxylic acid binding0.00000000028380.000000000001682Highly InformativeDirect
Cellular Component (CC)cytoplasmic part11Least InformativeInherited
Cellular Component (CC)intracellular organelle part11Least InformativeInherited
Cellular Component (CC)intracellular membrane-bounded organelle11Least InformativeInherited
Cellular Component (CC)membrane0.93031Least InformativeInherited
Cellular Component (CC)protein complex11Least InformativeInherited
Cellular Component (CC)endoplasmic reticulum0.00000013730.0003444Moderately InformativeDirect
Cellular Component (CC)endomembrane system0.000068810.01686Moderately InformativeInherited
Cellular Component (CC)organelle membrane0.00051780.01817Moderately InformativeInherited
Cellular Component (CC)endoplasmic reticulum membrane0.0000000031740.0000009448InformativeDirect

Document: GO annotation of SCOP domains

Gene Ontology (high-coverage)

(show details)
GO term FDR (all) SDFO level Annotation (direct or inherited)
Biological Process (BP) biosynthetic process 0 Least Informative Direct
Biological Process (BP) single-organism metabolic process 0 Least Informative Direct
Biological Process (BP) response to stimulus 0.8952 Least Informative Inherited
Biological Process (BP) single-organism cellular process 1 Least Informative Inherited
Biological Process (BP) cellular component organization or biogenesis 1 Least Informative Inherited
Biological Process (BP) cellular macromolecule metabolic process 1 Least Informative Inherited
Biological Process (BP) developmental process 1 Least Informative Inherited
Biological Process (BP) protein metabolic process 1 Least Informative Inherited
Biological Process (BP) heterocycle metabolic process 1 Least Informative Inherited
Biological Process (BP) organic cyclic compound metabolic process 1 Least Informative Inherited
Biological Process (BP) cellular aromatic compound metabolic process 1 Least Informative Inherited
Biological Process (BP) carbohydrate metabolic process 0 Moderately Informative Direct
Biological Process (BP) lipid biosynthetic process 0 Moderately Informative Direct
Biological Process (BP) response to abiotic stimulus 0.00000008238 Moderately Informative Direct
Biological Process (BP) cellular macromolecule biosynthetic process 0.00000000000002766 Moderately Informative Direct
Biological Process (BP) cellular lipid metabolic process 0 Moderately Informative Direct
Biological Process (BP) carbohydrate derivative metabolic process 0 Moderately Informative Direct
Biological Process (BP) response to organic substance 0.8078 Moderately Informative Inherited
Biological Process (BP) cellular response to chemical stimulus 0.2663 Moderately Informative Inherited
Biological Process (BP) response to endogenous stimulus 0.6671 Moderately Informative Inherited
Biological Process (BP) monocarboxylic acid metabolic process 0.001115 Moderately Informative Inherited
Biological Process (BP) single-organism biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) organic hydroxy compound metabolic process 0.2893 Moderately Informative Inherited
Biological Process (BP) cellular component biogenesis 1 Moderately Informative Inherited
Biological Process (BP) cellular response to stress 0.6524 Moderately Informative Inherited
Biological Process (BP) reproduction 1 Moderately Informative Inherited
Biological Process (BP) anatomical structure morphogenesis 1 Moderately Informative Inherited
Biological Process (BP) cell differentiation 1 Moderately Informative Inherited
Biological Process (BP) single-organism developmental process 1 Moderately Informative Inherited
Biological Process (BP) organic substance catabolic process 1 Moderately Informative Inherited
Biological Process (BP) cellular protein modification process 0.3968 Moderately Informative Inherited
Biological Process (BP) response to oxygen-containing compound 0.002209 Moderately Informative Inherited
Biological Process (BP) cellular catabolic process 1 Moderately Informative Inherited
Biological Process (BP) oxidation-reduction process 0.07023 Moderately Informative Inherited
Biological Process (BP) polysaccharide metabolic process 0 Informative Direct
Biological Process (BP) membrane lipid metabolic process 0 Informative Direct
Biological Process (BP) regulation of hormone levels 0.000009564 Informative Direct
Biological Process (BP) energy derivation by oxidation of organic compounds 0 Informative Direct
Biological Process (BP) carbohydrate biosynthetic process 0 Informative Direct
Biological Process (BP) pigment metabolic process 0.0001236 Informative Direct
Biological Process (BP) cellular carbohydrate metabolic process 0 Informative Direct
Biological Process (BP) response to hormone stimulus 0.07939 Informative Inherited
Biological Process (BP) response to lipid 0.4713 Informative Inherited
Biological Process (BP) cellular response to endogenous stimulus 0.4517 Informative Inherited
Biological Process (BP) response to organic cyclic compound 0.007537 Informative Inherited
Biological Process (BP) cellular response to oxygen-containing compound 0.7203 Informative Inherited
Biological Process (BP) programmed cell death 1 Informative Inherited
Biological Process (BP) alcohol metabolic process 0.1579 Informative Inherited
Biological Process (BP) organic hydroxy compound biosynthetic process 0.9066 Informative Inherited
Biological Process (BP) isoprenoid metabolic process 1 Informative Inherited
Biological Process (BP) developmental process involved in reproduction 1 Informative Inherited
Biological Process (BP) cell cycle process 1 Informative Inherited
Biological Process (BP) anatomical structure formation involved in morphogenesis 1 Informative Inherited
Biological Process (BP) sexual reproduction 1 Informative Inherited
Biological Process (BP) cellular process involved in reproduction 1 Informative Inherited
Biological Process (BP) hexose metabolic process 1 Informative Inherited
Biological Process (BP) carbohydrate catabolic process 0.1352 Informative Inherited
Biological Process (BP) peptidyl-amino acid modification 0.6669 Informative Inherited
Biological Process (BP) glycosyl compound biosynthetic process 0.0507 Informative Inherited
Biological Process (BP) response to nutrient levels 1 Informative Inherited
Biological Process (BP) response to light stimulus 0.3727 Informative Inherited
Biological Process (BP) response to inorganic substance 0.1438 Informative Inherited
Biological Process (BP) secondary metabolic process 0.3391 Informative Inherited
Biological Process (BP) retinoid metabolic process 0.0001997 Highly Informative Direct
Biological Process (BP) response to hypoxia 0.000000000000007281 Highly Informative Direct
Biological Process (BP) energy reserve metabolic process 0 Highly Informative Direct
Biological Process (BP) protein glycosylation 0 Highly Informative Direct
Biological Process (BP) xenobiotic metabolic process 0.00000001391 Highly Informative Direct
Biological Process (BP) lipopolysaccharide metabolic process 0 Highly Informative Direct
Biological Process (BP) glycolipid biosynthetic process 0 Highly Informative Direct
Biological Process (BP) oligosaccharide metabolic process 0.0000001043 Highly Informative Direct
Biological Process (BP) response to water deprivation 0.00001543 Highly Informative Direct
Biological Process (BP) phenylpropanoid metabolic process 0.00000002298 Highly Informative Direct
Biological Process (BP) response to carbohydrate stimulus 0.00002067 Highly Informative Direct
Biological Process (BP) glycoside metabolic process 0.00000000000009806 Highly Informative Direct
Biological Process (BP) cellular polysaccharide biosynthetic process 0 Highly Informative Direct
Biological Process (BP) cellular hormone metabolic process 0.00004292 Highly Informative Direct
Biological Process (BP) lipoprotein metabolic process 0.00000007408 Highly Informative Direct
Biological Process (BP) cell wall biogenesis 0.0001574 Highly Informative Direct
Biological Process (BP) post-translational protein modification 0.0001804 Highly Informative Direct
Biological Process (BP) external encapsulating structure organization 0.00008133 Highly Informative Direct
Biological Process (BP) cellular response to steroid hormone stimulus 0.000596 Highly Informative Direct
Biological Process (BP) response to corticosteroid stimulus 0.01121 Highly Informative Inherited
Biological Process (BP) response to ethanol 0.01768 Highly Informative Inherited
Biological Process (BP) cellular response to alcohol 0.001034 Highly Informative Inherited
Biological Process (BP) polyol metabolic process 0.531 Highly Informative Inherited
Biological Process (BP) alcohol biosynthetic process 0.04357 Highly Informative Inherited
Biological Process (BP) response to heat 0.001891 Highly Informative Inherited
Biological Process (BP) cellular response to starvation 0.01031 Highly Informative Inherited
Biological Process (BP) response to UV 0.009473 Highly Informative Inherited
Biological Process (BP) pigment biosynthetic process 0.007055 Highly Informative Inherited
Biological Process (BP) toxin metabolic process 0.02449 Highly Informative Inherited
Biological Process (BP) amino sugar metabolic process 0.009999 Highly Informative Inherited
Biological Process (BP) polysaccharide catabolic process 0.001936 Highly Informative Inherited
Biological Process (BP) cellular carbohydrate catabolic process 0.05842 Highly Informative Inherited
Molecular Function (MF) hydrolase activity 1 Least Informative Inherited
Molecular Function (MF) binding 1 Least Informative Inherited
Molecular Function (MF) isomerase activity 1 Moderately Informative Inherited
Molecular Function (MF) hydrolase activity, acting on ester bonds 0.6276 Moderately Informative Inherited
Molecular Function (MF) anion binding 0.4008 Moderately Informative Inherited
Molecular Function (MF) transferase activity, transferring glycosyl groups 0 Informative Direct
Molecular Function (MF) racemase and epimerase activity 0.00002217 Informative Direct
Molecular Function (MF) carboxylic acid binding 0.0000004055 Informative Direct
Molecular Function (MF) phosphoric ester hydrolase activity 0.01456 Informative Inherited
Molecular Function (MF) lipid binding 0.002672 Informative Inherited
Molecular Function (MF) drug binding 0.0009422 Highly Informative Direct
Molecular Function (MF) UDP-glycosyltransferase activity 0.00000000372 Highly Informative Direct
Molecular Function (MF) transferase activity, transferring hexosyl groups 0 Highly Informative Direct
Molecular Function (MF) racemase and epimerase activity, acting on carbohydrates and derivatives 0.0000003779 Highly Informative Direct
Molecular Function (MF) isoprenoid binding 0.0000000000001765 Highly Informative Direct
Molecular Function (MF) monocarboxylic acid binding 0.000000000001682 Highly Informative Direct
Cellular Component (CC) cytoplasmic part 1 Least Informative Inherited
Cellular Component (CC) intracellular organelle part 1 Least Informative Inherited
Cellular Component (CC) intracellular membrane-bounded organelle 1 Least Informative Inherited
Cellular Component (CC) membrane 1 Least Informative Inherited
Cellular Component (CC) protein complex 1 Least Informative Inherited
Cellular Component (CC) endoplasmic reticulum 0.0003444 Moderately Informative Direct
Cellular Component (CC) endomembrane system 0.01686 Moderately Informative Inherited
Cellular Component (CC) organelle membrane 0.01817 Moderately Informative Inherited
Cellular Component (CC) endoplasmic reticulum membrane 0.0000009448 Informative Direct

Document: GO annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Isomerases1Least InformativeInherited
Enzyme Commission (EC)Glycosyltransferases0Moderately InformativeDirect
Enzyme Commission (EC)Racemases and epimerases0.4591Moderately InformativeInherited
Enzyme Commission (EC)Acting on carbohydrates and derivatives0.00001553InformativeDirect

Document: EC annotation of SCOP domains

Disease Ontology (DO)

(show details)
DO termFDR (all)SDDO levelAnnotation (direct or inherited)
Disease Ontology (DO)disease of metabolism0.03006Moderately InformativeInherited

Document: DO annotation of SCOP domains

Worm Phenotype (WP)

(show details) Document: WP annotation of SCOP domains

Fly Anatomy (FA)

(show details)
FA termFDR (all)SDFA levelAnnotation (direct or inherited)
Fly Anatomy (FA)larva0Least InformativeDirect

Document: FA annotation of SCOP domains

Xenopus Anatomy (XA)

(show details) Document: XA annotation of SCOP domains

Arabidopsis Plant Ontology (AP)

(show details)
AP termFDR (all)SDAP levelAnnotation (direct or inherited)
Plant ANatomical entity (PAN)shoot axis0.8506Least InformativeInherited
Plant ANatomical entity (PAN)portion of meristem tissue1Least InformativeInherited
Plant ANatomical entity (PAN)root system1Least InformativeInherited
Plant ANatomical entity (PAN)cardinal part of multi-tissue plant structure1Least InformativeInherited
Plant ANatomical entity (PAN)primordium0.00000002644InformativeDirect
Plant ANatomical entity (PAN)root tip0.00001441InformativeDirect
Plant ANatomical entity (PAN)vegetative shoot apex0.00000000001324Highly InformativeDirect
Plant ANatomical entity (PAN)phyllome primordium0.00000000002034Highly InformativeDirect
Plant ANatomical entity (PAN)lateral root primordium0.00002942Highly InformativeDirect
Plant ANatomical entity (PAN)bud0.0005055Highly InformativeDirect

Document: AP annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEC levelAnnotation (direct or inherited)
Enzyme Commission (EC)Transferring phosphorous-containing groups1Least InformativeInherited
Enzyme Commission (EC)Hydrolases1Least InformativeInherited
Enzyme Commission (EC)Glycosyltransferases0Moderately InformativeDirect
Enzyme Commission (EC)Phosphotransferases with an alcohol group as acceptor1Moderately InformativeInherited
Enzyme Commission (EC)Phosphoric monoester hydrolases1Moderately InformativeInherited
Enzyme Commission (EC)Glycosylases1Moderately InformativeInherited
Enzyme Commission (EC)Isomerases1Moderately InformativeInherited
Enzyme Commission (EC)Hexosyltransferases0InformativeDirect
Enzyme Commission (EC)Racemases and epimerases0.9023InformativeInherited
Enzyme Commission (EC)Acting on carbohydrates and derivatives0.0006917Highly InformativeDirect
Enzyme Commission (EC)Transferring other glycosyl groups1Highly InformativeInherited

Document: EC annotation of SCOP domains

UniProtKB KeyWords (KW)

(show details)
KW termFDR (all)SDKW levelAnnotation (direct or inherited)
Biological processCell cycle0Moderately InformativeDirect
Biological processLipid metabolism0Moderately InformativeDirect
Biological processCarbohydrate metabolism0.00000000000003138Moderately InformativeDirect
Biological processCell shape0InformativeDirect
Biological processLipid biosynthesis0InformativeDirect
Biological processCell wall biogenesis/degradation0InformativeDirect
Biological processSteroid metabolism0.0004511InformativeDirect
Biological processGlycogen biosynthesis0Highly InformativeDirect
Biological processLipid A biosynthesis0Highly InformativeDirect
Biological processLipopolysaccharide biosynthesis0Highly InformativeDirect
Biological processPeptidoglycan synthesis0Highly InformativeDirect
Biological processSterol biosynthesis0Highly InformativeDirect
Biological processAutophagy0.000000000004937Highly InformativeDirect
Biological processDetoxification0.00001443Highly InformativeDirect
Biological processSteroid biosynthesis0.0002975Highly InformativeDirect
Biological processAntibiotic biosynthesis0.0008514Highly InformativeDirect
Cellular componentMembrane0Least InformativeDirect
Cellular componentEndoplasmic reticulum0Moderately InformativeDirect
Cellular componentCell membrane0Moderately InformativeDirect
Cellular componentGolgi apparatus0.00000000001551Moderately InformativeDirect
Cellular componentPlastid0.7999Moderately InformativeInherited
Cellular componentCell inner membrane0InformativeDirect
Cellular componentMicrosome0.0000000000001067Highly InformativeDirect
DomainTransmembrane0.2994Least InformativeInherited
DomainSignal-anchor0InformativeDirect
Post-translational modificationTransferase0Least InformativeDirect
Post-translational modificationGlycosyltransferase0InformativeDirect
Post-translational modificationGlycoprotein0.0006024Least InformativeDirect

Document: KW annotation of SCOP domains

UniProtKB UniPathway (UP)

(show details)
UP termFDR (all)SDUP levelAnnotation (direct or inherited)
UniPathway (UP)biopolymer metabolism0Least InformativeDirect
UniPathway (UP)lipid metabolism8.98e-16Least InformativeDirect
UniPathway (UP)carbohydrate metabolism1Least InformativeInherited
UniPathway (UP)aromatic compound metabolism1Least InformativeInherited
UniPathway (UP)biopolymer biosynthesis0Moderately InformativeDirect
UniPathway (UP)lipid biosynthesis0Moderately InformativeDirect
UniPathway (UP)glycan metabolism0Moderately InformativeDirect
UniPathway (UP)cellular component biogenesis0Moderately InformativeDirect
UniPathway (UP)membrane lipid metabolism0Moderately InformativeDirect
UniPathway (UP)secondary metabolite metabolism0.0000417Moderately InformativeDirect
UniPathway (UP)organic acid metabolism0.4484Moderately InformativeInherited
UniPathway (UP)alcohol metabolism0.5502Moderately InformativeInherited
UniPathway (UP)carbohydrate biosynthesis1Moderately InformativeInherited
UniPathway (UP)amine and polyamine metabolism1Moderately InformativeInherited
UniPathway (UP)aromatic compound biosynthesis1Moderately InformativeInherited
UniPathway (UP)peptidoglycan biosynthesis0InformativeDirect
UniPathway (UP)protein glycosylation0InformativeDirect
UniPathway (UP)flavonoid metabolism0.00000000000001141InformativeDirect
UniPathway (UP)phenylpropanoid biosynthesis0.0000000001092InformativeDirect
UniPathway (UP)organic acid biosynthesis0.000005064InformativeDirect
UniPathway (UP)pigment biosynthesis0.0002706InformativeDirect
UniPathway (UP)antibiotic biosynthesis0.06259InformativeInherited
UniPathway (UP)plant hormone metabolism0.2462InformativeInherited
UniPathway (UP)lipopolysaccharide biosynthesis1InformativeInherited
UniPathway (UP)amino-sugar metabolism1InformativeInherited
UniPathway (UP)amine and polyamine biosynthesis1InformativeInherited
UniPathway (UP)glycolipid biosynthesis1InformativeInherited
UniPathway (UP)anthocyanin biosynthesis0Highly InformativeDirect
UniPathway (UP)glycogen biosynthesis0Highly InformativeDirect
UniPathway (UP)lipid IV(A) biosynthesis0Highly InformativeDirect
UniPathway (UP)diglucosyl-diacylglycerol biosynthesis0.0000000006663Highly InformativeDirect
UniPathway (UP)amino-sugar biosynthesis0.0000001811Highly InformativeDirect
UniPathway (UP)LPS core biosynthesis0.0000002513Highly InformativeDirect
UniPathway (UP)trehalose metabolism0.000006207Highly InformativeDirect
UniPathway (UP)sucrose biosynthesis0.00001068Highly InformativeDirect
UniPathway (UP)enterobacterial common antigen biosynthesis0.0001309Highly InformativeDirect
UniPathway (UP)aminoglycoside antibiotic biosynthesis0.0004907Highly InformativeDirect
UniPathway (UP)auxin metabolism0.003207Highly InformativeInherited
UniPathway (UP)sphingolipid metabolism0.314Highly InformativeInherited
UniPathway (UP)glycerophospholipid metabolism1Highly InformativeInherited

Document: UP annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Functional annotation · Gene Ontology (high-quality) · Gene Ontology (high-coverage) · Enzyme Commission (EC) · Disease Ontology (DO) · Worm Phenotype (WP) · Fly Anatomy (FA) · Xenopus Anatomy (XA) · Arabidopsis Plant Ontology (AP) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) · UniProtKB UniPathway (UP) ]

Internal database links

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


Alignments of sequences to 24 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Browse and view proteins in genomes which have different domain combinations including a UDP-Glycosyltransferase/glycogen phosphorylase domain.


Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Explore domain occurrence network where nodes represent genomes and edges are domain architectures (shared between genomes) containing the superfamily of interest.

There are 24 hidden Markov models representing the UDP-Glycosyltransferase/glycogen phosphorylase superfamily. Information on how the models are built, and plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be inspected.


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