SUPERFAMILY 1.75 HMM library and genome assignments server


UDP-Glycosyltransferase/glycogen phosphorylase superfamily

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Alpha and beta proteins (a/b) [ 51349] (147)
Fold:   UDP-Glycosyltransferase/glycogen phosphorylase [ 53755]
Superfamily:   UDP-Glycosyltransferase/glycogen phosphorylase [ 53756] (11)
Families:   beta-Glucosyltransferase (DNA-modifying) [ 53757]
  Peptidoglycan biosynthesis glycosyltransferase MurG [ 53760]
  UDP-N-acetylglucosamine 2-epimerase [ 53763]
  Gtf glycosyltransferase [ 64178] (3)
  ADP-heptose LPS heptosyltransferase II [ 89784]
  Trehalose-6-phosphate synthase, OtsA [ 82540]
  Oligosaccharide phosphorylase [ 53766] (2)
  Glycosyl transferases group 1 [ 110734] (3)
  Sialyltransferase-like [ 142773]
  UDPGT-like [ 159785] (4)
  FucT-like [ 159794]


Superfamily statistics
Genomes (3,140) Uniprot 2014_06 PDB chains (SCOP 1.75)
Domains 82,934 322,989 44
Proteins 80,737 319,598 44


Functional annotation
General category Metabolism
Detailed category Polysaccharide metabolism and transport

Document:
Function annotation of SCOP domain superfamilies

Gene Ontology (high-quality)

(show details)
GO termFDR (singleton)FDR (all)SDFO levelAnnotation (direct or inherited)
Biological Process (BP)biosynthetic process00Least InformativeDirect
Biological Process (BP)single-organism metabolic process9.152e-060Least InformativeDirect
Biological Process (BP)response to stimulus0.020670.983Least InformativeInherited
Biological Process (BP)single-organism cellular process11Least InformativeInherited
Biological Process (BP)cellular macromolecule metabolic process0.93851Least InformativeInherited
Biological Process (BP)nitrogen compound metabolic process11Least InformativeInherited
Biological Process (BP)protein metabolic process11Least InformativeInherited
Biological Process (BP)heterocycle metabolic process11Least InformativeInherited
Biological Process (BP)cellular aromatic compound metabolic process11Least InformativeInherited
Biological Process (BP)organic cyclic compound metabolic process11Least InformativeInherited
Biological Process (BP)carbohydrate metabolic process00Moderately InformativeDirect
Biological Process (BP)lipid biosynthetic process8.563e-120Moderately InformativeDirect
Biological Process (BP)response to abiotic stimulus0.00084453.062e-07Moderately InformativeDirect
Biological Process (BP)cellular macromolecule biosynthetic process1.684e-151.576e-13Moderately InformativeDirect
Biological Process (BP)cellular lipid metabolic process00Moderately InformativeDirect
Biological Process (BP)carbohydrate derivative metabolic process00Moderately InformativeDirect
Biological Process (BP)response to organic substance0.82770.8885Moderately InformativeInherited
Biological Process (BP)cellular response to chemical stimulus0.0050080.4237Moderately InformativeInherited
Biological Process (BP)response to endogenous stimulus0.084120.7931Moderately InformativeInherited
Biological Process (BP)monocarboxylic acid metabolic process4.408e-060.001158Moderately InformativeInherited
Biological Process (BP)regulation of biological quality0.81411Moderately InformativeInherited
Biological Process (BP)cellular response to stress0.17840.7358Moderately InformativeInherited
Biological Process (BP)cellular nitrogen compound biosynthetic process11Moderately InformativeInherited
Biological Process (BP)organonitrogen compound biosynthetic process11Moderately InformativeInherited
Biological Process (BP)cellular protein modification process1.911e-050.4574Moderately InformativeInherited
Biological Process (BP)response to oxygen-containing compound0.1920.004705Moderately InformativeInherited
Biological Process (BP)cellular catabolic process11Moderately InformativeInherited
Biological Process (BP)polysaccharide metabolic process3.258e-150InformativeDirect
Biological Process (BP)membrane lipid metabolic process2.029e-110InformativeDirect
Biological Process (BP)regulation of hormone levels3.142e-071.298e-05InformativeDirect
Biological Process (BP)carbohydrate biosynthetic process3.617e-140InformativeDirect
Biological Process (BP)pigment metabolic process2.755e-060.0001292InformativeDirect
Biological Process (BP)cellular carbohydrate metabolic process00InformativeDirect
Biological Process (BP)response to hormone stimulus0.0018250.09884InformativeInherited
Biological Process (BP)response to lipid0.13640.4202InformativeInherited
Biological Process (BP)cellular response to endogenous stimulus0.071010.5267InformativeInherited
Biological Process (BP)response to organic cyclic compound0.00020560.01143InformativeInherited
Biological Process (BP)hexose metabolic process11InformativeInherited
Biological Process (BP)carbohydrate catabolic process10.1443InformativeInherited
Biological Process (BP)amide biosynthetic process0.014450.00529InformativeInherited
Biological Process (BP)peptide metabolic process0.010050.07219InformativeInherited
Biological Process (BP)peptidyl-amino acid modification0.47850.6795InformativeInherited
Biological Process (BP)glycosyl compound biosynthetic process0.075170.04629InformativeInherited
Biological Process (BP)response to nutrient levels0.69020.6921InformativeInherited
Biological Process (BP)secondary metabolic process0.0029780.3654InformativeInherited
Biological Process (BP)isoprenoid metabolic process11InformativeInherited
Biological Process (BP)retinoid metabolic process0.00095220.0002245Highly InformativeDirect
Biological Process (BP)response to hypoxia0.00070024.112e-14Highly InformativeDirect
Biological Process (BP)protein glycosylation00Highly InformativeDirect
Biological Process (BP)xenobiotic metabolic process3.297e-092.627e-08Highly InformativeDirect
Biological Process (BP)lipopolysaccharide metabolic process7.9e-130Highly InformativeDirect
Biological Process (BP)glycolipid biosynthetic process1.745e-070Highly InformativeDirect
Biological Process (BP)oligosaccharide metabolic process1.366e-069.732e-08Highly InformativeDirect
Biological Process (BP)phenylpropanoid metabolic process1.631e-093.296e-08Highly InformativeDirect
Biological Process (BP)glycoside metabolic process6.872e-129.109e-15Highly InformativeDirect
Biological Process (BP)antibiotic biosynthetic process0.0003453.289e-06Highly InformativeDirect
Biological Process (BP)cellular polysaccharide biosynthetic process1.424e-070Highly InformativeDirect
Biological Process (BP)cellular hormone metabolic process0.00010256.272e-05Highly InformativeDirect
Biological Process (BP)lipoprotein metabolic process1.016e-071.033e-07Highly InformativeDirect
Biological Process (BP)peptide biosynthetic process0.00023830.0003431Highly InformativeDirect
Biological Process (BP)post-translational protein modification0.00070870.0001885Highly InformativeDirect
Biological Process (BP)cellular response to steroid hormone stimulus0.0004710.0007574Highly InformativeDirect
Biological Process (BP)response to glucocorticoid stimulus0.0015680.003188Highly InformativeInherited
Biological Process (BP)response to heat0.051670.002344Highly InformativeInherited
Biological Process (BP)cellular response to starvation0.020420.01503Highly InformativeInherited
Biological Process (BP)response to carbohydrate stimulus0.033091.364e-05Highly InformativeInherited
Biological Process (BP)pigment biosynthetic process0.0055860.009928Highly InformativeInherited
Biological Process (BP)toxin metabolic process0.0041380.02867Highly InformativeInherited
Biological Process (BP)amino sugar metabolic process0.16290.0121Highly InformativeInherited
Molecular Function (MF)transferase activity00Least InformativeDirect
Molecular Function (MF)binding11Least InformativeInherited
Molecular Function (MF)isomerase activity11Moderately InformativeInherited
Molecular Function (MF)anion binding0.32790.4638Moderately InformativeInherited
Molecular Function (MF)transferase activity, transferring glycosyl groups00InformativeDirect
Molecular Function (MF)carboxylic acid binding7.772e-076.714e-07InformativeDirect
Molecular Function (MF)racemase and epimerase activity0.0054253.247e-05InformativeInherited
Molecular Function (MF)lipid binding0.00017640.003478InformativeInherited
Molecular Function (MF)UDP-glycosyltransferase activity6.719e-085.105e-09Highly InformativeDirect
Molecular Function (MF)transferase activity, transferring hexosyl groups1.007e-090Highly InformativeDirect
Molecular Function (MF)racemase and epimerase activity, acting on carbohydrates and derivatives0.00078954.704e-07Highly InformativeDirect
Molecular Function (MF)isoprenoid binding9.764e-091.621e-13Highly InformativeDirect
Molecular Function (MF)monocarboxylic acid binding4.594e-102.902e-12Highly InformativeDirect
Cellular Component (CC)cytoplasmic part11Least InformativeInherited
Cellular Component (CC)intracellular organelle part11Least InformativeInherited
Cellular Component (CC)intracellular membrane-bounded organelle11Least InformativeInherited
Cellular Component (CC)membrane0.93861Least InformativeInherited
Cellular Component (CC)protein complex11Least InformativeInherited
Cellular Component (CC)endoplasmic reticulum3.339e-070.0005533Moderately InformativeDirect
Cellular Component (CC)endomembrane system0.00010480.02089Moderately InformativeInherited
Cellular Component (CC)organelle membrane0.00089950.02432Moderately InformativeInherited
Cellular Component (CC)endoplasmic reticulum membrane5.568e-091.403e-06InformativeDirect

Document: GO annotation of SCOP domains

Gene Ontology (high-coverage)

(show details)
GO term FDR (all) SDFO level Annotation (direct or inherited)
Biological Process (BP) biosynthetic process 0 Least Informative Direct
Biological Process (BP) single-organism metabolic process 0 Least Informative Direct
Biological Process (BP) response to stimulus 0.983 Least Informative Inherited
Biological Process (BP) single-organism cellular process 1 Least Informative Inherited
Biological Process (BP) cellular component organization or biogenesis 1 Least Informative Inherited
Biological Process (BP) cellular macromolecule metabolic process 1 Least Informative Inherited
Biological Process (BP) nitrogen compound metabolic process 1 Least Informative Inherited
Biological Process (BP) developmental process 1 Least Informative Inherited
Biological Process (BP) protein metabolic process 1 Least Informative Inherited
Biological Process (BP) heterocycle metabolic process 1 Least Informative Inherited
Biological Process (BP) organic cyclic compound metabolic process 1 Least Informative Inherited
Biological Process (BP) cellular aromatic compound metabolic process 1 Least Informative Inherited
Biological Process (BP) carbohydrate metabolic process 0 Moderately Informative Direct
Biological Process (BP) lipid biosynthetic process 0 Moderately Informative Direct
Biological Process (BP) response to abiotic stimulus 3.062e-07 Moderately Informative Direct
Biological Process (BP) cellular macromolecule biosynthetic process 1.576e-13 Moderately Informative Direct
Biological Process (BP) cellular lipid metabolic process 0 Moderately Informative Direct
Biological Process (BP) carbohydrate derivative metabolic process 0 Moderately Informative Direct
Biological Process (BP) response to organic substance 0.8885 Moderately Informative Inherited
Biological Process (BP) cellular response to chemical stimulus 0.4237 Moderately Informative Inherited
Biological Process (BP) response to endogenous stimulus 0.7931 Moderately Informative Inherited
Biological Process (BP) monocarboxylic acid metabolic process 0.001158 Moderately Informative Inherited
Biological Process (BP) single-organism biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) organic hydroxy compound metabolic process 0.3919 Moderately Informative Inherited
Biological Process (BP) cellular component biogenesis 1 Moderately Informative Inherited
Biological Process (BP) regulation of biological quality 1 Moderately Informative Inherited
Biological Process (BP) cellular response to stress 0.7358 Moderately Informative Inherited
Biological Process (BP) reproduction 1 Moderately Informative Inherited
Biological Process (BP) anatomical structure morphogenesis 1 Moderately Informative Inherited
Biological Process (BP) cell differentiation 1 Moderately Informative Inherited
Biological Process (BP) cellular nitrogen compound biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) organonitrogen compound biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) single-organism developmental process 1 Moderately Informative Inherited
Biological Process (BP) cellular protein modification process 0.4574 Moderately Informative Inherited
Biological Process (BP) response to oxygen-containing compound 0.004705 Moderately Informative Inherited
Biological Process (BP) cellular catabolic process 1 Moderately Informative Inherited
Biological Process (BP) polysaccharide metabolic process 0 Informative Direct
Biological Process (BP) membrane lipid metabolic process 0 Informative Direct
Biological Process (BP) regulation of hormone levels 1.298e-05 Informative Direct
Biological Process (BP) energy derivation by oxidation of organic compounds 0 Informative Direct
Biological Process (BP) carbohydrate biosynthetic process 0 Informative Direct
Biological Process (BP) pigment metabolic process 0.0001292 Informative Direct
Biological Process (BP) cellular carbohydrate metabolic process 0 Informative Direct
Biological Process (BP) response to hormone stimulus 0.09884 Informative Inherited
Biological Process (BP) response to lipid 0.4202 Informative Inherited
Biological Process (BP) cellular response to endogenous stimulus 0.5267 Informative Inherited
Biological Process (BP) response to organic cyclic compound 0.01143 Informative Inherited
Biological Process (BP) alcohol metabolic process 0.1552 Informative Inherited
Biological Process (BP) organic hydroxy compound biosynthetic process 0.9722 Informative Inherited
Biological Process (BP) isoprenoid metabolic process 1 Informative Inherited
Biological Process (BP) developmental process involved in reproduction 1 Informative Inherited
Biological Process (BP) cell cycle process 1 Informative Inherited
Biological Process (BP) anatomical structure formation involved in morphogenesis 1 Informative Inherited
Biological Process (BP) sexual reproduction 1 Informative Inherited
Biological Process (BP) cellular process involved in reproduction 1 Informative Inherited
Biological Process (BP) hexose metabolic process 1 Informative Inherited
Biological Process (BP) carbohydrate catabolic process 0.1443 Informative Inherited
Biological Process (BP) amide biosynthetic process 0.00529 Informative Inherited
Biological Process (BP) peptide metabolic process 0.07219 Informative Inherited
Biological Process (BP) peptidyl-amino acid modification 0.6795 Informative Inherited
Biological Process (BP) glycosyl compound biosynthetic process 0.04629 Informative Inherited
Biological Process (BP) response to nutrient levels 0.6921 Informative Inherited
Biological Process (BP) response to light stimulus 0.4129 Informative Inherited
Biological Process (BP) response to inorganic substance 0.2048 Informative Inherited
Biological Process (BP) secondary metabolic process 0.3654 Informative Inherited
Biological Process (BP) retinoid metabolic process 0.0002245 Highly Informative Direct
Biological Process (BP) response to hypoxia 4.112e-14 Highly Informative Direct
Biological Process (BP) energy reserve metabolic process 0 Highly Informative Direct
Biological Process (BP) protein glycosylation 0 Highly Informative Direct
Biological Process (BP) xenobiotic metabolic process 2.627e-08 Highly Informative Direct
Biological Process (BP) lipopolysaccharide metabolic process 0 Highly Informative Direct
Biological Process (BP) glycolipid biosynthetic process 0 Highly Informative Direct
Biological Process (BP) oligosaccharide metabolic process 9.732e-08 Highly Informative Direct
Biological Process (BP) response to water deprivation 0.0001092 Highly Informative Direct
Biological Process (BP) phenylpropanoid metabolic process 3.296e-08 Highly Informative Direct
Biological Process (BP) response to carbohydrate stimulus 1.364e-05 Highly Informative Direct
Biological Process (BP) glycoside metabolic process 9.109e-15 Highly Informative Direct
Biological Process (BP) antibiotic biosynthetic process 3.289e-06 Highly Informative Direct
Biological Process (BP) cellular polysaccharide biosynthetic process 0 Highly Informative Direct
Biological Process (BP) cellular hormone metabolic process 6.272e-05 Highly Informative Direct
Biological Process (BP) lipoprotein metabolic process 1.033e-07 Highly Informative Direct
Biological Process (BP) cell wall biogenesis 0.0003146 Highly Informative Direct
Biological Process (BP) peptide biosynthetic process 0.0003431 Highly Informative Direct
Biological Process (BP) post-translational protein modification 0.0001885 Highly Informative Direct
Biological Process (BP) external encapsulating structure organization 0.0001027 Highly Informative Direct
Biological Process (BP) cellular response to steroid hormone stimulus 0.0007574 Highly Informative Direct
Biological Process (BP) response to glucocorticoid stimulus 0.003188 Highly Informative Inherited
Biological Process (BP) polyol metabolic process 0.5236 Highly Informative Inherited
Biological Process (BP) alcohol biosynthetic process 0.04218 Highly Informative Inherited
Biological Process (BP) response to heat 0.002344 Highly Informative Inherited
Biological Process (BP) cellular response to starvation 0.01503 Highly Informative Inherited
Biological Process (BP) response to UV 0.01099 Highly Informative Inherited
Biological Process (BP) pigment biosynthetic process 0.009928 Highly Informative Inherited
Biological Process (BP) toxin metabolic process 0.02867 Highly Informative Inherited
Biological Process (BP) amino sugar metabolic process 0.0121 Highly Informative Inherited
Biological Process (BP) polysaccharide catabolic process 0.00238 Highly Informative Inherited
Biological Process (BP) cellular carbohydrate catabolic process 0.07064 Highly Informative Inherited
Molecular Function (MF) transferase activity 0 Least Informative Direct
Molecular Function (MF) hydrolase activity 1 Least Informative Inherited
Molecular Function (MF) binding 1 Least Informative Inherited
Molecular Function (MF) isomerase activity 1 Moderately Informative Inherited
Molecular Function (MF) hydrolase activity, acting on ester bonds 0.7059 Moderately Informative Inherited
Molecular Function (MF) anion binding 0.4638 Moderately Informative Inherited
Molecular Function (MF) transferase activity, transferring glycosyl groups 0 Informative Direct
Molecular Function (MF) racemase and epimerase activity 3.247e-05 Informative Direct
Molecular Function (MF) carboxylic acid binding 6.714e-07 Informative Direct
Molecular Function (MF) phosphoric ester hydrolase activity 0.02193 Informative Inherited
Molecular Function (MF) lipid binding 0.003478 Informative Inherited
Molecular Function (MF) UDP-glycosyltransferase activity 5.105e-09 Highly Informative Direct
Molecular Function (MF) transferase activity, transferring hexosyl groups 0 Highly Informative Direct
Molecular Function (MF) racemase and epimerase activity, acting on carbohydrates and derivatives 4.704e-07 Highly Informative Direct
Molecular Function (MF) isoprenoid binding 1.621e-13 Highly Informative Direct
Molecular Function (MF) monocarboxylic acid binding 2.902e-12 Highly Informative Direct
Cellular Component (CC) cytoplasmic part 1 Least Informative Inherited
Cellular Component (CC) intracellular organelle part 1 Least Informative Inherited
Cellular Component (CC) intracellular membrane-bounded organelle 1 Least Informative Inherited
Cellular Component (CC) membrane 1 Least Informative Inherited
Cellular Component (CC) protein complex 1 Least Informative Inherited
Cellular Component (CC) endoplasmic reticulum 0.0005533 Moderately Informative Direct
Cellular Component (CC) endomembrane system 0.02089 Moderately Informative Inherited
Cellular Component (CC) organelle membrane 0.02432 Moderately Informative Inherited
Cellular Component (CC) endoplasmic reticulum membrane 1.403e-06 Informative Direct
Cellular Component (CC) external encapsulating structure 0.1143 Informative Inherited

Document: GO annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Isomerases1Least InformativeInherited
Enzyme Commission (EC)Glycosyltransferases0Moderately InformativeDirect
Enzyme Commission (EC)Racemases and epimerases0.4591Moderately InformativeInherited
Enzyme Commission (EC)Acting on carbohydrates and derivatives1.553e-05InformativeDirect

Document: EC annotation of SCOP domains

Disease Ontology (DO)

(show details)
DO termFDR (all)SDDO levelAnnotation (direct or inherited)
Disease Ontology (DO)disease of metabolism0.02949Moderately InformativeInherited

Document: DO annotation of SCOP domains

Worm Phenotype (WP)

(show details) Document: WP annotation of SCOP domains

Fly Anatomy (FA)

(show details)
FA termFDR (all)SDFA levelAnnotation (direct or inherited)
Fly Anatomy (FA)larva0Least InformativeDirect

Document: FA annotation of SCOP domains

Xenopus Anatomy (XA)

(show details) Document: XA annotation of SCOP domains

Arabidopsis Plant Ontology (AP)

(show details)
AP termFDR (all)SDAP levelAnnotation (direct or inherited)
Plant ANatomical entity (PAN)shoot axis0.8506Least InformativeInherited
Plant ANatomical entity (PAN)portion of meristem tissue1Least InformativeInherited
Plant ANatomical entity (PAN)root system1Least InformativeInherited
Plant ANatomical entity (PAN)cardinal part of multi-tissue plant structure1Least InformativeInherited
Plant ANatomical entity (PAN)primordium2.644e-08InformativeDirect
Plant ANatomical entity (PAN)root tip1.441e-05InformativeDirect
Plant ANatomical entity (PAN)vegetative shoot apex1.324e-11Highly InformativeDirect
Plant ANatomical entity (PAN)phyllome primordium2.034e-11Highly InformativeDirect
Plant ANatomical entity (PAN)lateral root primordium2.942e-05Highly InformativeDirect
Plant ANatomical entity (PAN)bud0.0005055Highly InformativeDirect

Document: AP annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEC levelAnnotation (direct or inherited)
Enzyme Commission (EC)Transferring phosphorous-containing groups1Least InformativeInherited
Enzyme Commission (EC)Hydrolases1Least InformativeInherited
Enzyme Commission (EC)Glycosyltransferases0Moderately InformativeDirect
Enzyme Commission (EC)Phosphotransferases with an alcohol group as acceptor1Moderately InformativeInherited
Enzyme Commission (EC)Phosphoric monoester hydrolases1Moderately InformativeInherited
Enzyme Commission (EC)Glycosylases1Moderately InformativeInherited
Enzyme Commission (EC)Isomerases1Moderately InformativeInherited
Enzyme Commission (EC)Hexosyltransferases0InformativeDirect
Enzyme Commission (EC)Racemases and epimerases0.9089InformativeInherited
Enzyme Commission (EC)Acting on carbohydrates and derivatives0.0007423Highly InformativeDirect
Enzyme Commission (EC)Transferring other glycosyl groups1Highly InformativeInherited

Document: EC annotation of SCOP domains

UniProtKB KeyWords (KW)

(show details)
KW termFDR (all)SDKW levelAnnotation (direct or inherited)
Biological processCell cycle0Moderately InformativeDirect
Biological processLipid metabolism0Moderately InformativeDirect
Biological processCarbohydrate metabolism9.352e-16Moderately InformativeDirect
Biological processCell shape0InformativeDirect
Biological processLipid biosynthesis0InformativeDirect
Biological processCell wall biogenesis/degradation0InformativeDirect
Biological processSteroid metabolism0.0005811InformativeDirect
Biological processGlycogen biosynthesis0Highly InformativeDirect
Biological processLipid A biosynthesis0Highly InformativeDirect
Biological processLipopolysaccharide biosynthesis0Highly InformativeDirect
Biological processPeptidoglycan synthesis0Highly InformativeDirect
Biological processSterol biosynthesis0Highly InformativeDirect
Biological processAutophagy5.253e-12Highly InformativeDirect
Biological processDetoxification1.48e-05Highly InformativeDirect
Biological processSteroid biosynthesis0.0003164Highly InformativeDirect
Biological processAntibiotic biosynthesis0.0008709Highly InformativeDirect
Cellular componentMembrane0Least InformativeDirect
Cellular componentEndoplasmic reticulum0Moderately InformativeDirect
Cellular componentCell membrane0Moderately InformativeDirect
Cellular componentGolgi apparatus1.633e-11Moderately InformativeDirect
Cellular componentPlastid0.8055Moderately InformativeInherited
Cellular componentCell inner membrane0InformativeDirect
Cellular componentMicrosome1.068e-13Highly InformativeDirect
DomainTransmembrane0.3273Least InformativeInherited
DomainSignal-anchor0InformativeDirect
Post-translational modificationTransferase0Least InformativeDirect
Post-translational modificationGlycosyltransferase0InformativeDirect
Post-translational modificationGlycoprotein0.0006439Least InformativeDirect

Document: KW annotation of SCOP domains

UniProtKB UniPathway (UP)

(show details)
UP termFDR (all)SDUP levelAnnotation (direct or inherited)
UniPathway (UP)biopolymer metabolism0Least InformativeDirect
UniPathway (UP)secondary metabolite metabolism1.541e-08Moderately InformativeDirect
UniPathway (UP)pigment metabolism9.457e-07Moderately InformativeDirect
UniPathway (UP)aromatic compound biosynthesis2.549e-06Moderately InformativeDirect
UniPathway (UP)glycan metabolism0.0001407Moderately InformativeDirect
UniPathway (UP)membrane lipid metabolism0.007942Moderately InformativeInherited
UniPathway (UP)cellular component biogenesis0.02873Moderately InformativeInherited
UniPathway (UP)lipid biosynthesis0.4492Moderately InformativeInherited
UniPathway (UP)protein glycosylation0InformativeDirect
UniPathway (UP)cell surface structure biogenesis3.256e-11InformativeDirect
UniPathway (UP)sphingolipid metabolism2.439e-07InformativeDirect
UniPathway (UP)glycan biosynthesis5.882e-07InformativeDirect
UniPathway (UP)flavonoid biosynthesis0.002916InformativeInherited
UniPathway (UP)sphingolipid biosynthesis1.715e-10Highly InformativeDirect
UniPathway (UP)anthocyanin biosynthesis3.553e-10Highly InformativeDirect

Document: UP annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Functional annotation · Gene Ontology (high-quality) · Gene Ontology (high-coverage) · Enzyme Commission (EC) · Disease Ontology (DO) · Worm Phenotype (WP) · Fly Anatomy (FA) · Xenopus Anatomy (XA) · Arabidopsis Plant Ontology (AP) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) · UniProtKB UniPathway (UP) ]

Internal database links

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


Alignments of sequences to 24 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Browse and view proteins in genomes which have different domain combinations including a UDP-Glycosyltransferase/glycogen phosphorylase domain.


Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Explore domain occurrence network where nodes represent genomes and edges are domain architectures (shared between genomes) containing the superfamily of interest.

There are 24 hidden Markov models representing the UDP-Glycosyltransferase/glycogen phosphorylase superfamily. Information on how the models are built, and plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be inspected.


Jump to [ Top of page · SCOP classification · Functional annotation · Gene Ontology (high-quality) · Gene Ontology (high-coverage) · Enzyme Commission (EC) · Disease Ontology (DO) · Worm Phenotype (WP) · Fly Anatomy (FA) · Xenopus Anatomy (XA) · Arabidopsis Plant Ontology (AP) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) · UniProtKB UniPathway (UP) · Internal database links ]