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UDP-Glycosyltransferase/glycogen phosphorylase superfamily

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Alpha and beta proteins (a/b) [ 51349] (147)
Fold:   UDP-Glycosyltransferase/glycogen phosphorylase [ 53755]
Superfamily:   UDP-Glycosyltransferase/glycogen phosphorylase [ 53756] (11)
Families:   beta-Glucosyltransferase (DNA-modifying) [ 53757]
  Peptidoglycan biosynthesis glycosyltransferase MurG [ 53760]
  UDP-N-acetylglucosamine 2-epimerase [ 53763]
  Gtf glycosyltransferase [ 64178] (3)
  ADP-heptose LPS heptosyltransferase II [ 89784]
  Trehalose-6-phosphate synthase, OtsA [ 82540]
  Oligosaccharide phosphorylase [ 53766] (2)
  Glycosyl transferases group 1 [ 110734] (3)
  Sialyltransferase-like [ 142773]
  UDPGT-like [ 159785] (4)
  FucT-like [ 159794]


Superfamily statistics
Genomes (3,141) Uniprot 2014_06 PDB chains (SCOP 1.75)
Domains 82,998 322,989 44
Proteins 80,801 319,598 44


Functional annotation
General category Metabolism
Detailed category Polysaccharide metabolism and transport

Document:
Function annotation of SCOP domain superfamilies

Gene Ontology (high-quality)

(show details)
GO termFDR (singleton)FDR (all)SDFO levelAnnotation (direct or inherited)
Biological Process (BP)biosynthetic process00Least InformativeDirect
Biological Process (BP)single-organism metabolic process0.000012010Least InformativeDirect
Biological Process (BP)response to stimulus0.0241Least InformativeInherited
Biological Process (BP)single-organism cellular process11Least InformativeInherited
Biological Process (BP)cellular macromolecule metabolic process0.94821Least InformativeInherited
Biological Process (BP)nitrogen compound metabolic process11Least InformativeInherited
Biological Process (BP)protein metabolic process11Least InformativeInherited
Biological Process (BP)heterocycle metabolic process11Least InformativeInherited
Biological Process (BP)cellular aromatic compound metabolic process11Least InformativeInherited
Biological Process (BP)organic cyclic compound metabolic process11Least InformativeInherited
Biological Process (BP)carbohydrate metabolic process00Moderately InformativeDirect
Biological Process (BP)lipid metabolic process00Moderately InformativeDirect
Biological Process (BP)response to abiotic stimulus0.00085760.0000003733Moderately InformativeDirect
Biological Process (BP)cellular macromolecule biosynthetic process0.0000000000000016880.0000000000002117Moderately InformativeDirect
Biological Process (BP)carbohydrate derivative metabolic process00Moderately InformativeDirect
Biological Process (BP)response to organic substance0.83490.8977Moderately InformativeInherited
Biological Process (BP)cellular response to chemical stimulus0.005320.4535Moderately InformativeInherited
Biological Process (BP)response to endogenous stimulus0.084750.807Moderately InformativeInherited
Biological Process (BP)monocarboxylic acid metabolic process0.0000045020.001102Moderately InformativeInherited
Biological Process (BP)regulation of biological quality0.83581Moderately InformativeInherited
Biological Process (BP)cellular response to stress0.17780.761Moderately InformativeInherited
Biological Process (BP)cellular nitrogen compound biosynthetic process11Moderately InformativeInherited
Biological Process (BP)organonitrogen compound biosynthetic process11Moderately InformativeInherited
Biological Process (BP)organic substance catabolic process11Moderately InformativeInherited
Biological Process (BP)cellular protein modification process0.000021590.4708Moderately InformativeInherited
Biological Process (BP)response to oxygen-containing compound0.20610.005704Moderately InformativeInherited
Biological Process (BP)cellular catabolic process11Moderately InformativeInherited
Biological Process (BP)polysaccharide metabolic process0.0000000000000032610InformativeDirect
Biological Process (BP)membrane lipid metabolic process0.000000000023250InformativeDirect
Biological Process (BP)regulation of hormone levels0.00000032820.00001365InformativeDirect
Biological Process (BP)carbohydrate biosynthetic process0.000000000000033360InformativeDirect
Biological Process (BP)pigment metabolic process0.0000032760.0001368InformativeDirect
Biological Process (BP)cellular carbohydrate metabolic process00InformativeDirect
Biological Process (BP)response to hormone stimulus0.0017860.1049InformativeInherited
Biological Process (BP)response to lipid0.15070.4305InformativeInherited
Biological Process (BP)cellular response to endogenous stimulus0.070830.5425InformativeInherited
Biological Process (BP)response to organic cyclic compound0.00019030.0122InformativeInherited
Biological Process (BP)hexose metabolic process11InformativeInherited
Biological Process (BP)carbohydrate catabolic process10.1434InformativeInherited
Biological Process (BP)amide biosynthetic process0.015040.005394InformativeInherited
Biological Process (BP)peptide metabolic process0.011210.07439InformativeInherited
Biological Process (BP)peptidyl-amino acid modification0.4840.6806InformativeInherited
Biological Process (BP)glycosyl compound biosynthetic process0.072460.04546InformativeInherited
Biological Process (BP)response to nutrient levels0.69210.6971InformativeInherited
Biological Process (BP)secondary metabolic process0.0031070.372InformativeInherited
Biological Process (BP)isoprenoid metabolic process11InformativeInherited
Biological Process (BP)retinoid metabolic process0.00096780.0002262Highly InformativeDirect
Biological Process (BP)response to hypoxia0.00073680.00000000000005424Highly InformativeDirect
Biological Process (BP)protein glycosylation00Highly InformativeDirect
Biological Process (BP)xenobiotic metabolic process0.0000000033870.00000002771Highly InformativeDirect
Biological Process (BP)lipopolysaccharide metabolic process0.00000000000065560Highly InformativeDirect
Biological Process (BP)glycolipid biosynthetic process0.00000015880Highly InformativeDirect
Biological Process (BP)oligosaccharide metabolic process0.0000013690.00000009239Highly InformativeDirect
Biological Process (BP)phenylpropanoid metabolic process0.0000000016820.00000003512Highly InformativeDirect
Biological Process (BP)glycoside metabolic process0.0000000000071440.000000000000009148Highly InformativeDirect
Biological Process (BP)antibiotic biosynthetic process0.0001480.000001017Highly InformativeDirect
Biological Process (BP)cellular polysaccharide biosynthetic process0.00000014020Highly InformativeDirect
Biological Process (BP)cellular hormone metabolic process0.00010440.00006334Highly InformativeDirect
Biological Process (BP)lipoprotein metabolic process0.00000010490.0000001046Highly InformativeDirect
Biological Process (BP)peptide biosynthetic process0.00026290.0003657Highly InformativeDirect
Biological Process (BP)post-translational protein modification0.00070090.0001899Highly InformativeDirect
Biological Process (BP)cellular response to steroid hormone stimulus0.00043330.0007777Highly InformativeDirect
Biological Process (BP)response to glucocorticoid stimulus0.0015940.003264Highly InformativeInherited
Biological Process (BP)response to heat0.050870.002247Highly InformativeInherited
Biological Process (BP)cellular response to starvation0.020550.01655Highly InformativeInherited
Biological Process (BP)response to carbohydrate stimulus0.033070.00001348Highly InformativeInherited
Biological Process (BP)pigment biosynthetic process0.0060290.01021Highly InformativeInherited
Biological Process (BP)toxin metabolic process0.0041780.0296Highly InformativeInherited
Biological Process (BP)amino sugar metabolic process0.15540.01288Highly InformativeInherited
Molecular Function (MF)transferase activity00Least InformativeDirect
Molecular Function (MF)binding11Least InformativeInherited
Molecular Function (MF)isomerase activity11Moderately InformativeInherited
Molecular Function (MF)anion binding0.33330.4795Moderately InformativeInherited
Molecular Function (MF)transferase activity, transferring glycosyl groups00InformativeDirect
Molecular Function (MF)carboxylic acid binding0.00000080150.0000007667InformativeDirect
Molecular Function (MF)racemase and epimerase activity0.0054870.00003502InformativeInherited
Molecular Function (MF)lipid binding0.00018170.003779InformativeInherited
Molecular Function (MF)UDP-glycosyltransferase activity0.00000014240.000000007583Highly InformativeDirect
Molecular Function (MF)transferase activity, transferring hexosyl groups0.00000000040150Highly InformativeDirect
Molecular Function (MF)racemase and epimerase activity, acting on carbohydrates and derivatives0.00079880.0000005471Highly InformativeDirect
Molecular Function (MF)isoprenoid binding0.0000000097440.0000000000001648Highly InformativeDirect
Molecular Function (MF)monocarboxylic acid binding0.00000000047520.000000000002953Highly InformativeDirect
Cellular Component (CC)cytoplasmic part11Least InformativeInherited
Cellular Component (CC)intracellular organelle part11Least InformativeInherited
Cellular Component (CC)intracellular membrane-bounded organelle11Least InformativeInherited
Cellular Component (CC)membrane0.82151Least InformativeInherited
Cellular Component (CC)protein complex11Least InformativeInherited
Cellular Component (CC)endoplasmic reticulum0.00000041380.0005987Moderately InformativeDirect
Cellular Component (CC)endomembrane system0.00000005180.0003138Moderately InformativeDirect
Cellular Component (CC)organelle membrane0.00010790.006038Moderately InformativeInherited
Cellular Component (CC)endoplasmic reticulum membrane0.000000000021410.00000001879InformativeDirect

Document: GO annotation of SCOP domains

Gene Ontology (high-coverage)

(show details)
GO term FDR (all) SDFO level Annotation (direct or inherited)
Biological Process (BP) biosynthetic process 0 Least Informative Direct
Biological Process (BP) single-organism metabolic process 0 Least Informative Direct
Biological Process (BP) response to stimulus 1 Least Informative Inherited
Biological Process (BP) single-organism cellular process 1 Least Informative Inherited
Biological Process (BP) cellular component organization or biogenesis 1 Least Informative Inherited
Biological Process (BP) cellular macromolecule metabolic process 1 Least Informative Inherited
Biological Process (BP) nitrogen compound metabolic process 1 Least Informative Inherited
Biological Process (BP) developmental process 1 Least Informative Inherited
Biological Process (BP) protein metabolic process 1 Least Informative Inherited
Biological Process (BP) heterocycle metabolic process 1 Least Informative Inherited
Biological Process (BP) organic cyclic compound metabolic process 1 Least Informative Inherited
Biological Process (BP) cellular aromatic compound metabolic process 1 Least Informative Inherited
Biological Process (BP) carbohydrate metabolic process 0 Moderately Informative Direct
Biological Process (BP) lipid metabolic process 0 Moderately Informative Direct
Biological Process (BP) response to abiotic stimulus 0.0000003733 Moderately Informative Direct
Biological Process (BP) cellular macromolecule biosynthetic process 0.0000000000002117 Moderately Informative Direct
Biological Process (BP) carbohydrate derivative metabolic process 0 Moderately Informative Direct
Biological Process (BP) response to organic substance 0.8977 Moderately Informative Inherited
Biological Process (BP) cellular response to chemical stimulus 0.4535 Moderately Informative Inherited
Biological Process (BP) response to endogenous stimulus 0.807 Moderately Informative Inherited
Biological Process (BP) monocarboxylic acid metabolic process 0.001102 Moderately Informative Inherited
Biological Process (BP) single-organism biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) organic hydroxy compound metabolic process 0.3701 Moderately Informative Inherited
Biological Process (BP) cellular component biogenesis 1 Moderately Informative Inherited
Biological Process (BP) regulation of biological quality 1 Moderately Informative Inherited
Biological Process (BP) cellular response to stress 0.761 Moderately Informative Inherited
Biological Process (BP) reproduction 1 Moderately Informative Inherited
Biological Process (BP) anatomical structure morphogenesis 1 Moderately Informative Inherited
Biological Process (BP) cell differentiation 1 Moderately Informative Inherited
Biological Process (BP) cellular nitrogen compound biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) organonitrogen compound biosynthetic process 1 Moderately Informative Inherited
Biological Process (BP) organic substance catabolic process 1 Moderately Informative Inherited
Biological Process (BP) cellular protein modification process 0.4708 Moderately Informative Inherited
Biological Process (BP) response to oxygen-containing compound 0.005704 Moderately Informative Inherited
Biological Process (BP) cellular catabolic process 1 Moderately Informative Inherited
Biological Process (BP) polysaccharide metabolic process 0 Informative Direct
Biological Process (BP) membrane lipid metabolic process 0 Informative Direct
Biological Process (BP) regulation of hormone levels 0.00001365 Informative Direct
Biological Process (BP) energy derivation by oxidation of organic compounds 0 Informative Direct
Biological Process (BP) carbohydrate biosynthetic process 0 Informative Direct
Biological Process (BP) pigment metabolic process 0.0001368 Informative Direct
Biological Process (BP) cellular carbohydrate metabolic process 0 Informative Direct
Biological Process (BP) cell wall organization or biogenesis 0.00006699 Informative Direct
Biological Process (BP) response to hormone stimulus 0.1049 Informative Inherited
Biological Process (BP) response to lipid 0.4305 Informative Inherited
Biological Process (BP) cellular response to endogenous stimulus 0.5425 Informative Inherited
Biological Process (BP) response to organic cyclic compound 0.0122 Informative Inherited
Biological Process (BP) alcohol metabolic process 0.1583 Informative Inherited
Biological Process (BP) organic hydroxy compound biosynthetic process 0.9772 Informative Inherited
Biological Process (BP) isoprenoid metabolic process 1 Informative Inherited
Biological Process (BP) developmental process involved in reproduction 1 Informative Inherited
Biological Process (BP) cell cycle process 1 Informative Inherited
Biological Process (BP) anatomical structure formation involved in morphogenesis 1 Informative Inherited
Biological Process (BP) sexual reproduction 1 Informative Inherited
Biological Process (BP) cellular process involved in reproduction 1 Informative Inherited
Biological Process (BP) hexose metabolic process 1 Informative Inherited
Biological Process (BP) carbohydrate catabolic process 0.1434 Informative Inherited
Biological Process (BP) amide biosynthetic process 0.005394 Informative Inherited
Biological Process (BP) peptide metabolic process 0.07439 Informative Inherited
Biological Process (BP) peptidyl-amino acid modification 0.6806 Informative Inherited
Biological Process (BP) glycosyl compound biosynthetic process 0.04546 Informative Inherited
Biological Process (BP) response to nutrient levels 0.6971 Informative Inherited
Biological Process (BP) response to light stimulus 0.4207 Informative Inherited
Biological Process (BP) response to inorganic substance 0.2078 Informative Inherited
Biological Process (BP) secondary metabolic process 0.372 Informative Inherited
Biological Process (BP) retinoid metabolic process 0.0002262 Highly Informative Direct
Biological Process (BP) response to hypoxia 0.00000000000005424 Highly Informative Direct
Biological Process (BP) energy reserve metabolic process 0 Highly Informative Direct
Biological Process (BP) protein glycosylation 0 Highly Informative Direct
Biological Process (BP) xenobiotic metabolic process 0.00000002771 Highly Informative Direct
Biological Process (BP) lipopolysaccharide metabolic process 0 Highly Informative Direct
Biological Process (BP) glycolipid biosynthetic process 0 Highly Informative Direct
Biological Process (BP) oligosaccharide metabolic process 0.00000009239 Highly Informative Direct
Biological Process (BP) response to water deprivation 0.0001048 Highly Informative Direct
Biological Process (BP) phenylpropanoid metabolic process 0.00000003512 Highly Informative Direct
Biological Process (BP) response to carbohydrate stimulus 0.00001348 Highly Informative Direct
Biological Process (BP) glycoside metabolic process 0.000000000000009148 Highly Informative Direct
Biological Process (BP) antibiotic biosynthetic process 0.000001017 Highly Informative Direct
Biological Process (BP) cellular polysaccharide biosynthetic process 0 Highly Informative Direct
Biological Process (BP) cellular hormone metabolic process 0.00006334 Highly Informative Direct
Biological Process (BP) lipoprotein metabolic process 0.0000001046 Highly Informative Direct
Biological Process (BP) peptide biosynthetic process 0.0003657 Highly Informative Direct
Biological Process (BP) post-translational protein modification 0.0001899 Highly Informative Direct
Biological Process (BP) external encapsulating structure organization 0.0001188 Highly Informative Direct
Biological Process (BP) cellular response to steroid hormone stimulus 0.0007777 Highly Informative Direct
Biological Process (BP) response to glucocorticoid stimulus 0.003264 Highly Informative Inherited
Biological Process (BP) polyol metabolic process 0.5233 Highly Informative Inherited
Biological Process (BP) response to heat 0.002247 Highly Informative Inherited
Biological Process (BP) cellular response to starvation 0.01655 Highly Informative Inherited
Biological Process (BP) response to UV 0.01117 Highly Informative Inherited
Biological Process (BP) pigment biosynthetic process 0.01021 Highly Informative Inherited
Biological Process (BP) toxin metabolic process 0.0296 Highly Informative Inherited
Biological Process (BP) amino sugar metabolic process 0.01288 Highly Informative Inherited
Biological Process (BP) polysaccharide catabolic process 0.002306 Highly Informative Inherited
Biological Process (BP) cellular carbohydrate catabolic process 0.06884 Highly Informative Inherited
Molecular Function (MF) transferase activity 0 Least Informative Direct
Molecular Function (MF) hydrolase activity 1 Least Informative Inherited
Molecular Function (MF) binding 1 Least Informative Inherited
Molecular Function (MF) isomerase activity 1 Moderately Informative Inherited
Molecular Function (MF) hydrolase activity, acting on ester bonds 0.7029 Moderately Informative Inherited
Molecular Function (MF) anion binding 0.4795 Moderately Informative Inherited
Molecular Function (MF) transferase activity, transferring glycosyl groups 0 Informative Direct
Molecular Function (MF) racemase and epimerase activity 0.00003502 Informative Direct
Molecular Function (MF) carboxylic acid binding 0.0000007667 Informative Direct
Molecular Function (MF) phosphoric ester hydrolase activity 0.02093 Informative Inherited
Molecular Function (MF) lipid binding 0.003779 Informative Inherited
Molecular Function (MF) UDP-glycosyltransferase activity 0.000000007583 Highly Informative Direct
Molecular Function (MF) transferase activity, transferring hexosyl groups 0 Highly Informative Direct
Molecular Function (MF) racemase and epimerase activity, acting on carbohydrates and derivatives 0.0000005471 Highly Informative Direct
Molecular Function (MF) isoprenoid binding 0.0000000000001648 Highly Informative Direct
Molecular Function (MF) monocarboxylic acid binding 0.000000000002953 Highly Informative Direct
Cellular Component (CC) cytoplasmic part 1 Least Informative Inherited
Cellular Component (CC) intracellular organelle part 1 Least Informative Inherited
Cellular Component (CC) intracellular membrane-bounded organelle 1 Least Informative Inherited
Cellular Component (CC) membrane 1 Least Informative Inherited
Cellular Component (CC) protein complex 1 Least Informative Inherited
Cellular Component (CC) endoplasmic reticulum 0.0005987 Moderately Informative Direct
Cellular Component (CC) endomembrane system 0.0003138 Moderately Informative Direct
Cellular Component (CC) organelle membrane 0.006038 Moderately Informative Inherited
Cellular Component (CC) endoplasmic reticulum membrane 0.00000001879 Informative Direct
Cellular Component (CC) external encapsulating structure 0.1174 Informative Inherited

Document: GO annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Isomerases1Least InformativeInherited
Enzyme Commission (EC)Glycosyltransferases0Moderately InformativeDirect
Enzyme Commission (EC)Racemases and epimerases0.4591Moderately InformativeInherited
Enzyme Commission (EC)Acting on carbohydrates and derivatives0.00001553InformativeDirect

Document: EC annotation of SCOP domains

Disease Ontology (DO)

(show details)
DO termFDR (all)SDDO levelAnnotation (direct or inherited)
Disease Ontology (DO)disease of metabolism0.02961Moderately InformativeInherited

Document: DO annotation of SCOP domains

Worm Phenotype (WP)

(show details) Document: WP annotation of SCOP domains

Fly Anatomy (FA)

(show details)
FA termFDR (all)SDFA levelAnnotation (direct or inherited)
Fly Anatomy (FA)larva0Least InformativeDirect

Document: FA annotation of SCOP domains

Xenopus Anatomy (XA)

(show details) Document: XA annotation of SCOP domains

Arabidopsis Plant Ontology (AP)

(show details)
AP termFDR (all)SDAP levelAnnotation (direct or inherited)
Plant ANatomical entity (PAN)shoot axis0.8506Least InformativeInherited
Plant ANatomical entity (PAN)portion of meristem tissue1Least InformativeInherited
Plant ANatomical entity (PAN)root system1Least InformativeInherited
Plant ANatomical entity (PAN)cardinal part of multi-tissue plant structure1Least InformativeInherited
Plant ANatomical entity (PAN)primordium0.00000002644InformativeDirect
Plant ANatomical entity (PAN)root tip0.00001441InformativeDirect
Plant ANatomical entity (PAN)vegetative shoot apex0.00000000001324Highly InformativeDirect
Plant ANatomical entity (PAN)phyllome primordium0.00000000002034Highly InformativeDirect
Plant ANatomical entity (PAN)lateral root primordium0.00002942Highly InformativeDirect
Plant ANatomical entity (PAN)bud0.0005055Highly InformativeDirect

Document: AP annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEC levelAnnotation (direct or inherited)
Enzyme Commission (EC)Transferring phosphorous-containing groups1Least InformativeInherited
Enzyme Commission (EC)Hydrolases1Least InformativeInherited
Enzyme Commission (EC)Glycosyltransferases0Moderately InformativeDirect
Enzyme Commission (EC)Phosphotransferases with an alcohol group as acceptor1Moderately InformativeInherited
Enzyme Commission (EC)Phosphoric monoester hydrolases1Moderately InformativeInherited
Enzyme Commission (EC)Glycosylases1Moderately InformativeInherited
Enzyme Commission (EC)Isomerases1Moderately InformativeInherited
Enzyme Commission (EC)Hexosyltransferases0InformativeDirect
Enzyme Commission (EC)Racemases and epimerases0.9273InformativeInherited
Enzyme Commission (EC)Acting on carbohydrates and derivatives0.0008528Highly InformativeDirect
Enzyme Commission (EC)Transferring other glycosyl groups1Highly InformativeInherited

Document: EC annotation of SCOP domains

UniProtKB KeyWords (KW)

(show details)
KW termFDR (all)SDKW levelAnnotation (direct or inherited)
Biological processCell cycle0Moderately InformativeDirect
Biological processLipid metabolism0Moderately InformativeDirect
Biological processCarbohydrate metabolism9.345e-16Moderately InformativeDirect
Biological processCell shape0InformativeDirect
Biological processLipid biosynthesis0InformativeDirect
Biological processCell wall biogenesis/degradation0InformativeDirect
Biological processSteroid metabolism0.0005626InformativeDirect
Biological processGlycogen biosynthesis0Highly InformativeDirect
Biological processLipid A biosynthesis0Highly InformativeDirect
Biological processLipopolysaccharide biosynthesis0Highly InformativeDirect
Biological processPeptidoglycan synthesis0Highly InformativeDirect
Biological processSterol biosynthesis0Highly InformativeDirect
Biological processAutophagy0.00000000002288Highly InformativeDirect
Biological processAntibiotic biosynthesis0.0000003072Highly InformativeDirect
Biological processDetoxification0.00001526Highly InformativeDirect
Biological processSteroid biosynthesis0.0003164Highly InformativeDirect
Cellular componentMembrane0Least InformativeDirect
Cellular componentEndoplasmic reticulum0Moderately InformativeDirect
Cellular componentCell membrane0Moderately InformativeDirect
Cellular componentGolgi apparatus0.00000000002296Moderately InformativeDirect
Cellular componentPlastid0.7622Moderately InformativeInherited
Cellular componentCell inner membrane0InformativeDirect
Cellular componentMicrosome0.0000000000001049Highly InformativeDirect
DomainTransmembrane0.3655Least InformativeInherited
DomainSignal-anchor0InformativeDirect
Post-translational modificationTransferase0Least InformativeDirect
Post-translational modificationGlycosyltransferase0InformativeDirect
Post-translational modificationGlycoprotein0.0009316Least InformativeDirect

Document: KW annotation of SCOP domains

UniProtKB UniPathway (UP)

(show details)
UP termFDR (all)SDUP levelAnnotation (direct or inherited)
UniPathway (UP)biopolymer metabolism0Least InformativeDirect
UniPathway (UP)lipid metabolism6.774e-16Least InformativeDirect
UniPathway (UP)carbohydrate metabolism1Least InformativeInherited
UniPathway (UP)aromatic compound metabolism1Least InformativeInherited
UniPathway (UP)biopolymer biosynthesis0Moderately InformativeDirect
UniPathway (UP)lipid biosynthesis0Moderately InformativeDirect
UniPathway (UP)glycan metabolism0Moderately InformativeDirect
UniPathway (UP)cell wall metabolism0Moderately InformativeDirect
UniPathway (UP)cellular component biogenesis0Moderately InformativeDirect
UniPathway (UP)membrane lipid metabolism0Moderately InformativeDirect
UniPathway (UP)secondary metabolite metabolism0.0000525Moderately InformativeDirect
UniPathway (UP)organic acid metabolism0.4602Moderately InformativeInherited
UniPathway (UP)alcohol metabolism0.5865Moderately InformativeInherited
UniPathway (UP)carbohydrate biosynthesis1Moderately InformativeInherited
UniPathway (UP)amine and polyamine metabolism1Moderately InformativeInherited
UniPathway (UP)aromatic compound biosynthesis1Moderately InformativeInherited
UniPathway (UP)peptidoglycan biosynthesis0InformativeDirect
UniPathway (UP)protein glycosylation0InformativeDirect
UniPathway (UP)flavonoid metabolism0.00000000000001274InformativeDirect
UniPathway (UP)phenylpropanoid biosynthesis0.0000000001509InformativeDirect
UniPathway (UP)organic acid biosynthesis0.000005712InformativeDirect
UniPathway (UP)pigment biosynthesis0.0002929InformativeDirect
UniPathway (UP)antibiotic biosynthesis0.0007037InformativeDirect
UniPathway (UP)plant hormone metabolism0.2491InformativeInherited
UniPathway (UP)lipopolysaccharide biosynthesis1InformativeInherited
UniPathway (UP)amino-sugar metabolism1InformativeInherited
UniPathway (UP)amine and polyamine biosynthesis1InformativeInherited
UniPathway (UP)glycolipid biosynthesis1InformativeInherited
UniPathway (UP)anthocyanin biosynthesis0Highly InformativeDirect
UniPathway (UP)glycogen biosynthesis0Highly InformativeDirect
UniPathway (UP)lipid IV(A) biosynthesis0Highly InformativeDirect
UniPathway (UP)diglucosyl-diacylglycerol biosynthesis0.0000000006691Highly InformativeDirect
UniPathway (UP)amino-sugar biosynthesis0.0000001862Highly InformativeDirect
UniPathway (UP)LPS core biosynthesis0.0000002516Highly InformativeDirect
UniPathway (UP)trehalose metabolism0.000008204Highly InformativeDirect
UniPathway (UP)sucrose biosynthesis0.00001111Highly InformativeDirect
UniPathway (UP)enterobacterial common antigen biosynthesis0.0001312Highly InformativeDirect
UniPathway (UP)auxin metabolism0.003271Highly InformativeInherited
UniPathway (UP)sphingolipid metabolism0.3302Highly InformativeInherited
UniPathway (UP)glycerophospholipid metabolism1Highly InformativeInherited

Document: UP annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Functional annotation · Gene Ontology (high-quality) · Gene Ontology (high-coverage) · Enzyme Commission (EC) · Disease Ontology (DO) · Worm Phenotype (WP) · Fly Anatomy (FA) · Xenopus Anatomy (XA) · Arabidopsis Plant Ontology (AP) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) · UniProtKB UniPathway (UP) ]

Internal database links

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


Alignments of sequences to 24 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Browse and view proteins in genomes which have different domain combinations including a UDP-Glycosyltransferase/glycogen phosphorylase domain.


Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Explore domain occurrence network where nodes represent genomes and edges are domain architectures (shared between genomes) containing the superfamily of interest.

There are 24 hidden Markov models representing the UDP-Glycosyltransferase/glycogen phosphorylase superfamily. Information on how the models are built, and plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be inspected.


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