|
GO term |
FDR (all) |
IC level |
SDFO level |
Annotation (direct or inherited) |
| Biological Process (BP) |
sulfate assimilation |
1.41e-12 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
rRNA modification |
2.604e-05 |
2.222 |
-- |
DIRECT |
| Biological Process (BP) |
nucleobase-containing compound metabolic process |
7.085e-06 |
0.7305 |
-- |
DIRECT |
| Biological Process (BP) |
purine nucleotide biosynthetic process |
0.0005623 |
1.62 |
-- |
DIRECT |
| Biological Process (BP) |
DNA modification |
1.036e-11 |
2.097 |
-- |
DIRECT |
| Biological Process (BP) |
DNA alkylation |
0 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
DNA methylation |
8.626e-07 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
sulfur compound metabolic process |
1.241e-08 |
1.252 |
-- |
DIRECT |
| Biological Process (BP) |
metabolic process |
0.0003556 |
0.2411 |
-- |
DIRECT |
| Biological Process (BP) |
macromolecule catabolic process |
9.993e-09 |
1.252 |
-- |
DIRECT |
| Biological Process (BP) |
nucleoside biosynthetic process |
2.24e-05 |
1.62 |
-- |
DIRECT |
| Biological Process (BP) |
rRNA metabolic process |
0.0003743 |
1.796 |
-- |
DIRECT |
| Biological Process (BP) |
chromatin modification |
3.85e-05 |
1.854 |
-- |
DIRECT |
| Biological Process (BP) |
covalent chromatin modification |
3.81e-06 |
1.854 |
-- |
DIRECT |
| Biological Process (BP) |
methylation |
2.705e-13 |
1.854 |
-- |
DIRECT |
| Biological Process (BP) |
protein modification by small protein conjugation |
0 |
1.796 |
-- |
DIRECT |
| Biological Process (BP) |
nucleoside bisphosphate metabolic process |
2.119e-08 |
2.097 |
-- |
DIRECT |
| Biological Process (BP) |
nucleoside bisphosphate biosynthetic process |
4.47e-09 |
2.097 |
-- |
DIRECT |
| Biological Process (BP) |
purine nucleoside bisphosphate metabolic process |
1.822e-07 |
2.097 |
-- |
DIRECT |
| Biological Process (BP) |
purine ribonucleoside bisphosphate metabolic process |
2.579e-13 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
ncRNA metabolic process |
9.608e-05 |
1.444 |
-- |
DIRECT |
| Biological Process (BP) |
ribosome biogenesis |
2.977e-12 |
1.699 |
-- |
DIRECT |
| Biological Process (BP) |
purine nucleoside biosynthetic process |
0.000422 |
1.658 |
-- |
DIRECT |
| Biological Process (BP) |
macromolecule methylation |
1.197e-12 |
1.854 |
-- |
DIRECT |
| Biological Process (BP) |
cellular metabolic process |
1.088e-06 |
0.2708 |
-- |
DIRECT |
| Biological Process (BP) |
cellular protein catabolic process |
1.158e-14 |
1.745 |
-- |
DIRECT |
| Biological Process (BP) |
purine ribonucleoside metabolic process |
0.0003773 |
1.553 |
-- |
DIRECT |
| Biological Process (BP) |
purine ribonucleoside biosynthetic process |
0.000547 |
1.658 |
-- |
DIRECT |
| Biological Process (BP) |
ribose phosphate biosynthetic process |
0.0007053 |
1.699 |
-- |
DIRECT |
| Biological Process (BP) |
3'-phosphoadenosine 5'-phosphosulfate metabolic process |
7.031e-12 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
nucleic acid metabolic process |
0.0004505 |
0.9066 |
-- |
DIRECT |
| Biological Process (BP) |
nucleoside phosphate biosynthetic process |
0.0006817 |
1.444 |
-- |
DIRECT |
| Biological Process (BP) |
protein modification process |
1 |
0.9066 |
-- |
INHERITED FROM: protein modification by small protein conjugation or removal || protein ubiquitination involved in ubiquitin-dependent protein catabolic process || histone modification || protein autoubiquitination || protein ubiquitination || protein modification by small protein conjugation || histone ubiquitination |
| Biological Process (BP) |
organic acid metabolic process |
0.5537 |
0.8239 |
-- |
INHERITED FROM: 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process |
| Biological Process (BP) |
purine ribonucleotide metabolic process |
0.3489 |
1.62 |
-- |
INHERITED FROM: 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process |
| Biological Process (BP) |
ribonucleotide metabolic process |
0.02812 |
1.62 |
-- |
INHERITED FROM: 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process |
| Biological Process (BP) |
oxoacid metabolic process |
0.03738 |
0.8297 |
-- |
INHERITED FROM: 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process |
| Biological Process (BP) |
ribonucleoside biosynthetic process |
0.001668 |
1.62 |
-- |
INHERITED FROM: 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine ribonucleoside biosynthetic process |
| Biological Process (BP) |
purine ribonucleotide biosynthetic process |
0.005035 |
1.745 |
-- |
INHERITED FROM: 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process |
| Biological Process (BP) |
ribonucleotide biosynthetic process |
0.009662 |
1.745 |
-- |
INHERITED FROM: 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process |
| Biological Process (BP) |
organonitrogen compound metabolic process |
0.424 |
0.699 |
-- |
INHERITED FROM: purine ribonucleoside metabolic process || purine nucleoside bisphosphate biosynthetic process || purine-containing compound biosynthetic process || ribonucleoside metabolic process || purine ribonucleoside bisphosphate metabolic process || nucleoside biosynthetic process || purine nucleoside bisphosphate metabolic process || purine ribonucleoside biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process || purine nucleotide metabolic process || purine nucleoside biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process |
| Biological Process (BP) |
primary metabolic process |
0.1488 |
0.2976 |
-- |
INHERITED FROM: purine ribonucleoside metabolic process || histone modification || ribonucleoside metabolic process || nucleoside bisphosphate metabolic process || rRNA modification || nucleoside biosynthetic process || purine ribonucleoside biosynthetic process || ncRNA metabolic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || purine nucleotide biosynthetic process || DNA modification || nucleobase-containing compound metabolic process || nucleoside bisphosphate biosynthetic process || purine nucleotide metabolic process || purine nucleoside biosynthetic process || nucleoside phosphate biosynthetic process || proteolysis || DNA alkylation || purine nucleoside bisphosphate biosynthetic process || cellular protein catabolic process || protein modification by small protein conjugation or removal || protein catabolic process || protein ubiquitination || purine ribonucleoside bisphosphate metabolic process || protein modification by small protein conjugation || nucleic acid metabolic process || purine nucleoside bisphosphate metabolic process || DNA methylation || ncRNA processing || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || misfolded or incompletely synthesized protein catabolic process || DNA methylation or demethylation || protein ubiquitination involved in ubiquitin-dependent protein catabolic process || maintenance of DNA methylation || protein autoubiquitination || 3'-phosphoadenosine 5'-phosphosulfate metabolic process || RNA modification || rRNA metabolic process || histone ubiquitination |
| Biological Process (BP) |
small molecule metabolic process |
0.2182 |
0.6421 |
-- |
INHERITED FROM: purine ribonucleoside metabolic process || ribonucleoside metabolic process || nucleoside bisphosphate metabolic process || nucleoside biosynthetic process || purine ribonucleoside biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || purine nucleotide biosynthetic process || nucleoside bisphosphate biosynthetic process || purine nucleotide metabolic process || purine nucleoside biosynthetic process || nucleoside phosphate biosynthetic process || purine nucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate metabolic process || purine nucleoside bisphosphate metabolic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process |
| Biological Process (BP) |
cellular nitrogen compound metabolic process |
0.001811 |
0.585 |
-- |
INHERITED FROM: purine ribonucleoside metabolic process || DNA alkylation || purine nucleoside bisphosphate biosynthetic process || purine-containing compound biosynthetic process || ribonucleoside metabolic process || nucleoside bisphosphate metabolic process || purine ribonucleoside bisphosphate metabolic process || nucleic acid metabolic process || rRNA modification || nucleoside biosynthetic process || purine nucleoside bisphosphate metabolic process || purine ribonucleoside biosynthetic process || DNA methylation || ncRNA processing || ncRNA metabolic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process || DNA modification || DNA methylation or demethylation || nucleobase-containing compound metabolic process || nucleoside bisphosphate biosynthetic process || purine nucleotide metabolic process || maintenance of DNA methylation || purine nucleoside biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process || RNA modification || nucleoside phosphate biosynthetic process || rRNA metabolic process |
| Biological Process (BP) |
cellular process |
1 |
0.1415 |
-- |
INHERITED FROM: sulfur compound biosynthetic process || protein modification by small protein conjugation or removal || purine ribonucleoside bisphosphate metabolic process || DNA methylation or demethylation || maintenance of DNA methylation || rRNA metabolic process || purine ribonucleoside metabolic process || purine-containing compound biosynthetic process || histone modification || rRNA modification || purine ribonucleoside bisphosphate biosynthetic process || purine nucleotide biosynthetic process || DNA modification || nucleobase-containing compound metabolic process || nucleoside bisphosphate biosynthetic process || purine nucleoside biosynthetic process || nucleoside phosphate biosynthetic process || purine nucleoside bisphosphate biosynthetic process || chromatin modification || DNA methylation || ncRNA processing || cellular macromolecule catabolic process || cellular catabolic process || RNA modification || cellular metabolic process || nucleoside biosynthetic process || sulfate assimilation || ncRNA metabolic process || protein ubiquitination || heterocycle metabolic process || protein autoubiquitination || 3'-phosphoadenosine 5'-phosphosulfate metabolic process || histone ubiquitination || ribose phosphate biosynthetic process || ribonucleoside metabolic process || nucleoside bisphosphate metabolic process || purine ribonucleoside biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine nucleotide metabolic process || DNA alkylation || cellular protein catabolic process || macromolecule methylation || sulfur compound metabolic process || protein modification by small protein conjugation || nucleic acid metabolic process || purine nucleoside bisphosphate metabolic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || misfolded or incompletely synthesized protein catabolic process || covalent chromatin modification || protein ubiquitination involved in ubiquitin-dependent protein catabolic process |
| Biological Process (BP) |
biological_process |
0.01107 |
0 |
-- |
INHERITED FROM: sulfur compound biosynthetic process || DNA methylation or demethylation || maintenance of DNA methylation || purine ribonucleoside metabolic process || purine-containing compound biosynthetic process || histone modification || DNA modification || nucleobase-containing compound metabolic process || purine nucleoside biosynthetic process || purine nucleoside bisphosphate biosynthetic process || macromolecule catabolic process || ncRNA processing || cellular macromolecule catabolic process || cellular catabolic process || proteolysis || 3'-phosphoadenosine 5'-phosphosulfate metabolic process || organic substance catabolic process || organic cyclic compound metabolic process || nucleoside bisphosphate metabolic process || ribonucleoside bisphosphate biosynthetic process || ribonucleoprotein complex biogenesis || purine nucleotide metabolic process || metabolic process || methylation || sulfur compound metabolic process || protein modification by small protein conjugation || nucleic acid metabolic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || covalent chromatin modification || protein ubiquitination involved in ubiquitin-dependent protein catabolic process || ribosome biogenesis || protein modification by small protein conjugation or removal || purine ribonucleoside bisphosphate metabolic process || regulation of gene expression, epigenetic || rRNA metabolic process || rRNA modification || purine ribonucleoside bisphosphate biosynthetic process || purine nucleotide biosynthetic process || nucleoside bisphosphate biosynthetic process || nitrogen compound metabolic process || nucleoside phosphate biosynthetic process || glycosyl compound biosynthetic process || chromatin modification || protein catabolic process || DNA methylation || cellular component biogenesis || RNA modification || cellular metabolic process || nucleoside biosynthetic process || sulfate assimilation || ncRNA metabolic process || protein ubiquitination || heterocycle metabolic process || protein autoubiquitination || histone ubiquitination || ribose phosphate biosynthetic process || ribonucleoside metabolic process || purine ribonucleoside biosynthetic process || DNA alkylation || cellular protein catabolic process || macromolecule methylation || purine nucleoside bisphosphate metabolic process || misfolded or incompletely synthesized protein catabolic process |
| Biological Process (BP) |
cellular protein metabolic process |
0.435 |
0.6778 |
-- |
INHERITED FROM: cellular protein catabolic process || protein modification by small protein conjugation or removal || misfolded or incompletely synthesized protein catabolic process || protein ubiquitination involved in ubiquitin-dependent protein catabolic process || histone modification || protein autoubiquitination || protein ubiquitination || protein modification by small protein conjugation || histone ubiquitination |
| Biological Process (BP) |
catabolic process |
0.006665 |
0.7852 |
-- |
INHERITED FROM: cellular protein catabolic process || protein catabolic process || macromolecule catabolic process || cellular macromolecule catabolic process || cellular catabolic process || misfolded or incompletely synthesized protein catabolic process || protein ubiquitination involved in ubiquitin-dependent protein catabolic process || organic substance catabolic process |
| Biological Process (BP) |
ubiquitin-dependent protein catabolic process |
1 |
2.097 |
-- |
INHERITED FROM: protein ubiquitination involved in ubiquitin-dependent protein catabolic process |
| Biological Process (BP) |
modification-dependent macromolecule catabolic process |
0.003474 |
1.854 |
-- |
INHERITED FROM: protein ubiquitination involved in ubiquitin-dependent protein catabolic process |
| Biological Process (BP) |
regulation of biological process |
1 |
0.4486 |
-- |
INHERITED FROM: regulation of gene expression, epigenetic || maintenance of DNA methylation || DNA methylation |
| Biological Process (BP) |
biological regulation |
1 |
0.4202 |
-- |
INHERITED FROM: regulation of gene expression, epigenetic || maintenance of DNA methylation || DNA methylation |
| Biological Process (BP) |
RNA processing |
0.01463 |
1.377 |
-- |
INHERITED FROM: ncRNA processing || rRNA modification |
| Biological Process (BP) |
organic substance biosynthetic process |
1 |
0.5376 |
-- |
INHERITED FROM: purine nucleoside bisphosphate biosynthetic process || glycosyl compound biosynthetic process || purine-containing compound biosynthetic process || ribose phosphate biosynthetic process || nucleoside biosynthetic process || purine ribonucleoside biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process || nucleoside bisphosphate biosynthetic process || purine nucleoside biosynthetic process || nucleoside phosphate biosynthetic process |
| Biological Process (BP) |
cellular biosynthetic process |
1 |
0.5498 |
-- |
INHERITED FROM: purine nucleoside bisphosphate biosynthetic process || sulfur compound biosynthetic process || purine-containing compound biosynthetic process || nucleoside biosynthetic process || purine ribonucleoside biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process || nucleoside bisphosphate biosynthetic process || purine nucleoside biosynthetic process || nucleoside phosphate biosynthetic process |
| Biological Process (BP) |
purine-containing compound metabolic process |
0.0831 |
1.357 |
-- |
INHERITED FROM: purine nucleoside bisphosphate metabolic process || purine ribonucleoside bisphosphate metabolic process || purine-containing compound biosynthetic process || purine ribonucleoside metabolic process || purine nucleotide metabolic process || purine nucleoside bisphosphate biosynthetic process || purine ribonucleoside biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process || purine nucleoside biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process |
| Biological Process (BP) |
phosphorus metabolic process |
1 |
0.8013 |
-- |
INHERITED FROM: purine nucleoside bisphosphate metabolic process || purine nucleoside bisphosphate biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process || nucleoside bisphosphate biosynthetic process || ribose phosphate biosynthetic process || purine nucleotide metabolic process || nucleoside bisphosphate metabolic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process || purine ribonucleoside bisphosphate metabolic process || nucleoside phosphate biosynthetic process |
| Biological Process (BP) |
nucleoside phosphate metabolic process |
0.01169 |
1.194 |
-- |
INHERITED FROM: purine nucleoside bisphosphate metabolic process || nucleoside bisphosphate biosynthetic process || purine nucleotide metabolic process || purine nucleoside bisphosphate biosynthetic process || nucleoside bisphosphate metabolic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process || purine ribonucleoside bisphosphate metabolic process || nucleoside phosphate biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process |
| Biological Process (BP) |
ribonucleoside bisphosphate metabolic process |
1 |
2.097 |
-- |
INHERITED FROM: ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process || purine ribonucleoside bisphosphate metabolic process || purine ribonucleoside bisphosphate biosynthetic process |
| Biological Process (BP) |
organophosphate biosynthetic process |
0.01342 |
1.155 |
-- |
INHERITED FROM: nucleoside bisphosphate biosynthetic process || ribose phosphate biosynthetic process || purine nucleoside bisphosphate biosynthetic process || nucleoside phosphate biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process |
| Biological Process (BP) |
single-organism process |
1 |
0.3316 |
-- |
INHERITED FROM: histone modification || chromatin modification || histone ubiquitination || covalent chromatin modification |
| Biological Process (BP) |
macromolecule metabolic process |
0.007892 |
0.4634 |
-- |
INHERITED FROM: histone modification || rRNA modification || ncRNA metabolic process || DNA modification || proteolysis || DNA alkylation || cellular protein catabolic process || protein modification by small protein conjugation or removal || macromolecule methylation || protein catabolic process || protein ubiquitination || protein modification by small protein conjugation || nucleic acid metabolic process || macromolecule catabolic process || DNA methylation || ncRNA processing || cellular macromolecule catabolic process || misfolded or incompletely synthesized protein catabolic process || DNA methylation or demethylation || protein ubiquitination involved in ubiquitin-dependent protein catabolic process || maintenance of DNA methylation || protein autoubiquitination || RNA modification || rRNA metabolic process || histone ubiquitination |
| Biological Process (BP) |
chromatin organization |
0.1393 |
1.745 |
-- |
INHERITED FROM: chromatin modification || histone modification || histone ubiquitination || covalent chromatin modification |
| Biological Process (BP) |
cellular component organization |
1 |
0.6819 |
-- |
INHERITED FROM: chromatin modification || histone modification || covalent chromatin modification || histone ubiquitination |
| Biological Process (BP) |
carbohydrate derivative biosynthetic process |
0.07206 |
1.222 |
-- |
INHERITED FROM: nucleoside biosynthetic process || ribose phosphate biosynthetic process || purine ribonucleoside biosynthetic process || purine nucleoside biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process |
| Biological Process (BP) |
glycosyl compound metabolic process |
0.006675 |
1.377 |
-- |
INHERITED FROM: nucleoside biosynthetic process || purine ribonucleoside metabolic process || ribonucleoside metabolic process || purine ribonucleoside biosynthetic process || glycosyl compound biosynthetic process || purine nucleoside biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process |
| Biological Process (BP) |
nucleoside metabolic process |
0.002497 |
1.444 |
-- |
INHERITED FROM: nucleoside biosynthetic process || purine ribonucleoside metabolic process || ribonucleoside metabolic process || purine ribonucleoside biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleoside biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process |
| Biological Process (BP) |
organic substance metabolic process |
0.9483 |
0.2676 |
-- |
INHERITED FROM: nucleoside biosynthetic process || ncRNA metabolic process || proteolysis || protein modification by small protein conjugation or removal || protein ubiquitination || purine ribonucleoside bisphosphate metabolic process || DNA methylation or demethylation || maintenance of DNA methylation || protein autoubiquitination || 3'-phosphoadenosine 5'-phosphosulfate metabolic process || rRNA metabolic process || histone ubiquitination || organic substance catabolic process || purine ribonucleoside metabolic process || organic cyclic compound metabolic process || purine-containing compound biosynthetic process || ribose phosphate biosynthetic process || histone modification || ribonucleoside metabolic process || nucleoside bisphosphate metabolic process || rRNA modification || purine ribonucleoside biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || purine nucleotide biosynthetic process || DNA modification || nucleobase-containing compound metabolic process || nucleoside bisphosphate biosynthetic process || purine nucleotide metabolic process || purine nucleoside biosynthetic process || nucleoside phosphate biosynthetic process || DNA alkylation || purine nucleoside bisphosphate biosynthetic process || glycosyl compound biosynthetic process || cellular protein catabolic process || macromolecule methylation || protein catabolic process || protein modification by small protein conjugation || nucleic acid metabolic process || purine nucleoside bisphosphate metabolic process || macromolecule catabolic process || DNA methylation || ncRNA processing || cellular macromolecule catabolic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || misfolded or incompletely synthesized protein catabolic process || protein ubiquitination involved in ubiquitin-dependent protein catabolic process || RNA modification |
| Biological Process (BP) |
nucleobase-containing compound biosynthetic process |
1 |
1.167 |
-- |
INHERITED FROM: nucleoside biosynthetic process || nucleoside bisphosphate biosynthetic process || purine nucleoside bisphosphate biosynthetic process || purine ribonucleoside biosynthetic process || purine nucleoside biosynthetic process || nucleoside phosphate biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process |
| Biological Process (BP) |
proteolysis involved in cellular protein catabolic process |
0.001042 |
1.745 |
-- |
INHERITED FROM: misfolded or incompletely synthesized protein catabolic process || protein ubiquitination involved in ubiquitin-dependent protein catabolic process |
| Biological Process (BP) |
regulation of macromolecule metabolic process |
1 |
0.7959 |
-- |
INHERITED FROM: DNA methylation || regulation of gene expression, epigenetic || maintenance of DNA methylation |
| Biological Process (BP) |
macromolecule modification |
0.001075 |
0.8416 |
-- |
INHERITED FROM: DNA alkylation || DNA methylation || protein modification by small protein conjugation or removal || macromolecule methylation || DNA modification || DNA methylation or demethylation || protein ubiquitination involved in ubiquitin-dependent protein catabolic process || histone modification || maintenance of DNA methylation || protein autoubiquitination || protein ubiquitination || RNA modification || protein modification by small protein conjugation || histone ubiquitination || rRNA modification |
| Biological Process (BP) |
nucleotide metabolic process |
0.0101 |
1.222 |
-- |
INHERITED FROM: purine nucleotide metabolic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process |
| Biological Process (BP) |
nitrogen compound metabolic process |
0.0002852 |
0.5171 |
Least Informative |
DIRECT |
| Biological Process (BP) |
heterocycle metabolic process |
0.0002559 |
0.6308 |
Least Informative |
DIRECT |
| Biological Process (BP) |
organic cyclic compound metabolic process |
4.918e-05 |
0.5817 |
Least Informative |
DIRECT |
| Biological Process (BP) |
cellular aromatic compound metabolic process |
0.004302 |
0.6271 |
Least Informative |
INHERITED FROM: purine ribonucleoside metabolic process || purine-containing compound biosynthetic process || ribonucleoside metabolic process || nucleoside bisphosphate metabolic process || rRNA modification || nucleoside biosynthetic process || purine ribonucleoside biosynthetic process || ncRNA metabolic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || purine nucleotide biosynthetic process || DNA modification || nucleobase-containing compound metabolic process || nucleoside bisphosphate biosynthetic process || purine nucleotide metabolic process || purine nucleoside biosynthetic process || nucleoside phosphate biosynthetic process || DNA alkylation || purine nucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate metabolic process || nucleic acid metabolic process || purine nucleoside bisphosphate metabolic process || DNA methylation || ncRNA processing || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || DNA methylation or demethylation || maintenance of DNA methylation || 3'-phosphoadenosine 5'-phosphosulfate metabolic process || RNA modification || rRNA metabolic process |
| Biological Process (BP) |
single-organism metabolic process |
1 |
0.5376 |
Least Informative |
INHERITED FROM: purine ribonucleoside metabolic process || ribonucleoside metabolic process || nucleoside bisphosphate metabolic process || nucleoside biosynthetic process || purine ribonucleoside biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || purine nucleotide biosynthetic process || nucleoside bisphosphate biosynthetic process || purine nucleotide metabolic process || purine nucleoside biosynthetic process || nucleoside phosphate biosynthetic process || purine nucleoside bisphosphate biosynthetic process || glycosyl compound biosynthetic process || purine ribonucleoside bisphosphate metabolic process || purine nucleoside bisphosphate metabolic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process |
| Biological Process (BP) |
biosynthetic process |
1 |
0.52 |
Least Informative |
INHERITED FROM: purine nucleoside bisphosphate biosynthetic process || glycosyl compound biosynthetic process || sulfur compound biosynthetic process || purine-containing compound biosynthetic process || ribose phosphate biosynthetic process || nucleoside biosynthetic process || purine ribonucleoside biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process || nucleoside bisphosphate biosynthetic process || purine nucleoside biosynthetic process || nucleoside phosphate biosynthetic process |
| Biological Process (BP) |
single-organism cellular process |
1 |
0.3915 |
Least Informative |
INHERITED FROM: histone ubiquitination || histone modification || chromatin modification || covalent chromatin modification |
| Biological Process (BP) |
cellular component organization or biogenesis |
0.07425 |
0.6536 |
Least Informative |
INHERITED FROM: chromatin modification || histone modification || rRNA modification || covalent chromatin modification || ribonucleoprotein complex biogenesis || cellular component biogenesis || ribosome biogenesis || histone ubiquitination |
| Biological Process (BP) |
protein metabolic process |
0.0828 |
0.6383 |
Least Informative |
INHERITED FROM: proteolysis || cellular protein catabolic process || protein modification by small protein conjugation or removal || protein catabolic process || histone modification || protein ubiquitination || protein modification by small protein conjugation || misfolded or incompletely synthesized protein catabolic process || protein ubiquitination involved in ubiquitin-dependent protein catabolic process || protein autoubiquitination || histone ubiquitination |
| Biological Process (BP) |
regulation of metabolic process |
1 |
0.6946 |
Least Informative |
INHERITED FROM: DNA methylation || regulation of gene expression, epigenetic || maintenance of DNA methylation |
| Biological Process (BP) |
cellular macromolecule metabolic process |
0.08602 |
0.4976 |
Least Informative |
INHERITED FROM: DNA alkylation || cellular protein catabolic process || protein modification by small protein conjugation or removal || macromolecule methylation || histone modification || protein ubiquitination || protein modification by small protein conjugation || rRNA modification || DNA methylation || ncRNA processing || ncRNA metabolic process || cellular macromolecule catabolic process || misfolded or incompletely synthesized protein catabolic process || DNA modification || DNA methylation or demethylation || protein ubiquitination involved in ubiquitin-dependent protein catabolic process || maintenance of DNA methylation || protein autoubiquitination || RNA modification || rRNA metabolic process || histone ubiquitination |
| Biological Process (BP) |
cellular component biogenesis |
0.0002643 |
0.983 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
cellular catabolic process |
0.0006062 |
0.8928 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
organic substance catabolic process |
0.0008151 |
0.8297 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
cellular protein modification process |
0.6532 |
0.9066 |
Moderately Informative |
INHERITED FROM: protein modification by small protein conjugation or removal || protein ubiquitination involved in ubiquitin-dependent protein catabolic process || histone modification || protein autoubiquitination || protein ubiquitination || protein modification by small protein conjugation || histone ubiquitination |
| Biological Process (BP) |
RNA metabolic process |
0.03805 |
1.086 |
Moderately Informative |
INHERITED FROM: ncRNA processing || ncRNA metabolic process || RNA modification || rRNA metabolic process || rRNA modification |
| Biological Process (BP) |
gene expression |
0.1596 |
0.8729 |
Moderately Informative |
INHERITED FROM: ncRNA processing || rRNA modification |
| Biological Process (BP) |
phosphate-containing compound metabolic process |
0.7174 |
0.8182 |
Moderately Informative |
INHERITED FROM: purine nucleoside bisphosphate metabolic process || purine nucleoside bisphosphate biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process || nucleoside bisphosphate biosynthetic process || ribose phosphate biosynthetic process || purine nucleotide metabolic process || nucleoside bisphosphate metabolic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process || purine ribonucleoside bisphosphate metabolic process || nucleoside phosphate biosynthetic process |
| Biological Process (BP) |
organophosphate metabolic process |
0.3845 |
0.9914 |
Moderately Informative |
INHERITED FROM: purine nucleoside bisphosphate metabolic process || purine nucleoside bisphosphate biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process || nucleoside bisphosphate biosynthetic process || ribose phosphate biosynthetic process || purine nucleotide metabolic process || nucleoside bisphosphate metabolic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process || purine ribonucleoside bisphosphate metabolic process || nucleoside phosphate biosynthetic process |
| Biological Process (BP) |
organelle organization |
0.01889 |
0.8996 |
Moderately Informative |
INHERITED FROM: chromatin modification || covalent chromatin modification || histone modification || histone ubiquitination |
| Biological Process (BP) |
carbohydrate derivative metabolic process |
0.4859 |
1.018 |
Moderately Informative |
INHERITED FROM: nucleoside biosynthetic process || purine ribonucleoside metabolic process || purine ribonucleoside biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || ribose phosphate biosynthetic process || ribonucleoside metabolic process || purine nucleoside biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process |
| Biological Process (BP) |
organonitrogen compound biosynthetic process |
0.007854 |
0.8861 |
Moderately Informative |
INHERITED FROM: nucleoside biosynthetic process || purine nucleoside bisphosphate biosynthetic process || purine ribonucleoside biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process || purine-containing compound biosynthetic process || purine nucleoside biosynthetic process |
| Biological Process (BP) |
heterocycle biosynthetic process |
0.625 |
0.9355 |
Moderately Informative |
INHERITED FROM: nucleoside biosynthetic process || purine nucleoside bisphosphate biosynthetic process || purine ribonucleoside biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process || purine-containing compound biosynthetic process || nucleoside bisphosphate biosynthetic process || purine nucleoside biosynthetic process || nucleoside phosphate biosynthetic process |
| Biological Process (BP) |
aromatic compound biosynthetic process |
0.9939 |
0.9747 |
Moderately Informative |
INHERITED FROM: nucleoside biosynthetic process || purine nucleoside bisphosphate biosynthetic process || purine ribonucleoside biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process || purine-containing compound biosynthetic process || nucleoside bisphosphate biosynthetic process || purine nucleoside biosynthetic process || nucleoside phosphate biosynthetic process |
| Biological Process (BP) |
cellular nitrogen compound biosynthetic process |
0.8365 |
0.9136 |
Moderately Informative |
INHERITED FROM: nucleoside biosynthetic process || purine nucleoside bisphosphate biosynthetic process || purine ribonucleoside biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process || purine-containing compound biosynthetic process || nucleoside bisphosphate biosynthetic process || purine nucleoside biosynthetic process || nucleoside phosphate biosynthetic process |
| Biological Process (BP) |
organic cyclic compound biosynthetic process |
0.7352 |
0.8928 |
Moderately Informative |
INHERITED FROM: nucleoside biosynthetic process || purine nucleoside bisphosphate biosynthetic process || purine ribonucleoside biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process || purine-containing compound biosynthetic process || nucleoside bisphosphate biosynthetic process || purine nucleoside biosynthetic process || nucleoside phosphate biosynthetic process |
| Biological Process (BP) |
nucleobase-containing small molecule metabolic process |
0.5464 |
1.086 |
Moderately Informative |
INHERITED FROM: nucleoside biosynthetic process || purine nucleoside bisphosphate metabolic process || purine ribonucleoside metabolic process || purine nucleoside bisphosphate biosynthetic process || purine ribonucleoside biosynthetic process || ribonucleoside bisphosphate biosynthetic process || purine ribonucleoside bisphosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process || nucleoside bisphosphate biosynthetic process || purine nucleotide metabolic process || ribonucleoside metabolic process || nucleoside bisphosphate metabolic process || purine nucleoside biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process || purine ribonucleoside bisphosphate metabolic process || nucleoside phosphate biosynthetic process |
| Biological Process (BP) |
regulation of gene expression |
0.6152 |
0.9914 |
Moderately Informative |
INHERITED FROM: DNA methylation || regulation of gene expression, epigenetic || maintenance of DNA methylation |
| Biological Process (BP) |
purine nucleotide metabolic process |
0.0004178 |
1.553 |
Informative |
DIRECT |
| Biological Process (BP) |
proteolysis |
7.487e-14 |
1.553 |
Informative |
DIRECT |
| Biological Process (BP) |
ribonucleoside metabolic process |
0.0006868 |
1.495 |
Informative |
DIRECT |
| Biological Process (BP) |
RNA modification |
2.361e-07 |
1.62 |
Informative |
DIRECT |
| Biological Process (BP) |
ribonucleoprotein complex biogenesis |
1.248e-06 |
1.658 |
Informative |
DIRECT |
| Biological Process (BP) |
protein catabolic process |
2.099e-13 |
1.62 |
Informative |
DIRECT |
| Biological Process (BP) |
ncRNA processing |
4.687e-05 |
1.553 |
Informative |
DIRECT |
| Biological Process (BP) |
cellular macromolecule catabolic process |
1.739e-10 |
1.398 |
Informative |
DIRECT |
| Biological Process (BP) |
sulfur compound biosynthetic process |
0.0001221 |
1.523 |
Informative |
DIRECT |
| Biological Process (BP) |
protein modification by small protein conjugation or removal |
4.008e-15 |
1.745 |
Informative |
DIRECT |
| Biological Process (BP) |
purine-containing compound biosynthetic process |
9.301e-05 |
1.523 |
Informative |
DIRECT |
| Biological Process (BP) |
glycosyl compound biosynthetic process |
1.901e-05 |
1.585 |
Informative |
DIRECT |
| Biological Process (BP) |
ribose phosphate metabolic process |
0.001727 |
1.585 |
Informative |
INHERITED FROM: 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || ribose phosphate biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process |
| Biological Process (BP) |
nucleotide biosynthetic process |
0.01195 |
1.444 |
Informative |
INHERITED FROM: 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleotide biosynthetic process |
| Biological Process (BP) |
purine nucleoside metabolic process |
0.03979 |
1.553 |
Informative |
INHERITED FROM: purine ribonucleoside biosynthetic process || purine ribonucleoside metabolic process || 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process || purine nucleoside biosynthetic process || 3'-phosphoadenosine 5'-phosphosulfate metabolic process |
| Biological Process (BP) |
DNA metabolic process |
0.006345 |
1.268 |
Informative |
INHERITED FROM: DNA methylation or demethylation || DNA alkylation || maintenance of DNA methylation || DNA methylation || DNA modification |
| Biological Process (BP) |
chromosome organization |
0.003087 |
1.62 |
Informative |
INHERITED FROM: histone modification || chromatin modification || covalent chromatin modification || histone ubiquitination |
| Biological Process (BP) |
protein ubiquitination |
0 |
2.097 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
histone modification |
0.0002217 |
1.854 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
ribonucleoside bisphosphate biosynthetic process |
2.897e-11 |
2.097 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
purine nucleoside bisphosphate biosynthetic process |
8.513e-08 |
2.097 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
regulation of gene expression, epigenetic |
2.116e-13 |
2.097 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
DNA methylation or demethylation |
0 |
2.097 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
modification-dependent protein catabolic process |
0.7824 |
1.921 |
Highly Informative |
INHERITED FROM: protein ubiquitination involved in ubiquitin-dependent protein catabolic process |
| Biological Process (BP) |
rRNA processing |
0.009287 |
1.854 |
Highly Informative |
INHERITED FROM: rRNA modification |
| Molecular Function (MF) |
nucleic acid binding |
9.528e-05 |
1.11 |
-- |
DIRECT |
| Molecular Function (MF) |
translation initiation factor activity |
1.672e-05 |
2.201 |
-- |
DIRECT |
| Molecular Function (MF) |
catalytic activity |
0.0001588 |
0.2686 |
-- |
DIRECT |
| Molecular Function (MF) |
serine-type endopeptidase activity |
7.141e-05 |
2.377 |
-- |
DIRECT |
| Molecular Function (MF) |
ubiquitin-protein ligase activity |
4.365e-10 |
2.201 |
-- |
DIRECT |
| Molecular Function (MF) |
ligase activity |
0.0003634 |
1.356 |
-- |
DIRECT |
| Molecular Function (MF) |
acid-amino acid ligase activity |
5.338e-09 |
1.637 |
-- |
DIRECT |
| Molecular Function (MF) |
ATPase activity |
7.916e-05 |
1.599 |
-- |
DIRECT |
| Molecular Function (MF) |
serine hydrolase activity |
0.0002789 |
2.201 |
-- |
DIRECT |
| Molecular Function (MF) |
adenyl nucleotide binding |
0.0001283 |
1.833 |
-- |
DIRECT |
| Molecular Function (MF) |
adenyl ribonucleotide binding |
0.0001204 |
1.833 |
-- |
DIRECT |
| Molecular Function (MF) |
small molecule binding |
6.41e-07 |
1.317 |
-- |
DIRECT |
| Molecular Function (MF) |
histone binding |
0 |
2.377 |
-- |
DIRECT |
| Molecular Function (MF) |
ATPase activity, coupled |
1.022e-05 |
1.637 |
-- |
DIRECT |
| Molecular Function (MF) |
regulatory region DNA binding |
0.4358 |
2.377 |
-- |
INHERITED FROM: mitochondrial light strand promoter anti-sense binding |
| Molecular Function (MF) |
regulatory region nucleic acid binding |
0.4993 |
2.377 |
-- |
INHERITED FROM: mitochondrial light strand promoter anti-sense binding |
| Molecular Function (MF) |
transcription regulatory region DNA binding |
0.007596 |
2.377 |
-- |
INHERITED FROM: mitochondrial light strand promoter anti-sense binding |
| Molecular Function (MF) |
double-stranded DNA binding |
0.07718 |
2.679 |
-- |
INHERITED FROM: hemi-methylated DNA-binding |
| Molecular Function (MF) |
pyrophosphatase activity |
0.01123 |
1.298 |
-- |
INHERITED FROM: ATPase activity, coupled || ATPase activity || ATP-dependent peptidase activity |
| Molecular Function (MF) |
protein methyltransferase activity |
0.1338 |
2.679 |
-- |
INHERITED FROM: histone methyltransferase activity |
| Molecular Function (MF) |
purine ribonucleotide binding |
0.002238 |
1.679 |
-- |
INHERITED FROM: adenyl ribonucleotide binding || ATP binding |
| Molecular Function (MF) |
hydrolase activity, acting on acid anhydrides |
0.0116 |
1.281 |
-- |
INHERITED FROM: ATPase activity || ATPase activity, coupled || ATP-dependent peptidase activity |
| Molecular Function (MF) |
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides |
0.01147 |
1.281 |
-- |
INHERITED FROM: ATPase activity || ATPase activity, coupled || ATP-dependent peptidase activity |
| Molecular Function (MF) |
nucleoside phosphate binding |
0.001285 |
1.448 |
-- |
INHERITED FROM: methyl-CpNpG binding || adenyl ribonucleotide binding || methyl-CpG binding || ATP binding || methyl-CpNpN binding || nucleotide binding || adenyl nucleotide binding |
| Molecular Function (MF) |
sequence-specific DNA binding |
0.04797 |
2.679 |
-- |
INHERITED FROM: methyl-CpG binding |
| Molecular Function (MF) |
ion binding |
0.03807 |
0.8334 |
-- |
INHERITED FROM: zinc ion binding || ATP binding |
| Molecular Function (MF) |
metal ion binding |
0.1123 |
1.134 |
-- |
INHERITED FROM: zinc ion binding |
| Molecular Function (MF) |
purine nucleotide binding |
1 |
1.679 |
-- |
INHERITED FROM: ATP binding || adenyl ribonucleotide binding || adenyl nucleotide binding |
| Molecular Function (MF) |
ribonucleotide binding |
1 |
1.599 |
-- |
INHERITED FROM: ATP binding || adenyl ribonucleotide binding |
| Molecular Function (MF) |
nucleoside binding |
0.1612 |
1.775 |
-- |
INHERITED FROM: ATP binding |
| Molecular Function (MF) |
purine nucleoside binding |
0.001667 |
1.775 |
-- |
INHERITED FROM: ATP binding |
| Molecular Function (MF) |
ribonucleoside binding |
0.001654 |
1.775 |
-- |
INHERITED FROM: ATP binding |
| Molecular Function (MF) |
purine ribonucleoside binding |
0.001634 |
1.775 |
-- |
INHERITED FROM: ATP binding |
| Molecular Function (MF) |
purine ribonucleoside triphosphate binding |
0.2034 |
1.775 |
-- |
INHERITED FROM: ATP binding |
| Molecular Function (MF) |
peptidase activity, acting on L-amino acid peptides |
0.6386 |
1.565 |
-- |
INHERITED FROM: ATP-dependent peptidase activity || serine-type endopeptidase activity |
| Molecular Function (MF) |
molecular_function |
0.1223 |
0 |
-- |
INHERITED FROM: nucleic acid binding || adenylylsulfate kinase activity || methyl-CpNpG binding || ATPase activity, coupled || ligase activity || ubiquitin-protein ligase activity || histone methyltransferase activity || adenyl nucleotide binding || sulfate adenylyltransferase (ATP) activity || ATPase activity || methyl-CpG binding || methyl-CpNpN binding || acid-amino acid ligase activity || serine hydrolase activity || sulfate adenylyltransferase activity || serine-type endopeptidase activity || adenyl ribonucleotide binding || histone binding || nucleotide binding || small molecule binding || ATP binding || transferase activity || ATP-dependent peptidase activity || catalytic activity || nucleotidyltransferase activity || peptidase activity || translation initiation factor activity || organic cyclic compound binding || heterocyclic compound binding || mitochondrial light strand promoter anti-sense binding || adenylyltransferase activity || structure-specific DNA binding || small conjugating protein ligase activity || ligase activity, forming carbon-nitrogen bonds || hemi-methylated DNA-binding || methyltransferase activity || zinc ion binding |
| Molecular Function (MF) |
transferase activity |
0.0006099 |
0.7491 |
Least Informative |
DIRECT |
| Molecular Function (MF) |
hydrolase activity |
1 |
0.6657 |
Least Informative |
INHERITED FROM: ATPase activity || ATP-dependent peptidase activity || serine-type endopeptidase activity || ATPase activity, coupled || peptidase activity || serine hydrolase activity |
| Molecular Function (MF) |
binding |
1 |
0.3952 |
Least Informative |
INHERITED FROM: nucleic acid binding || hemi-methylated DNA-binding || heterocyclic compound binding || methyl-CpNpN binding || mitochondrial light strand promoter anti-sense binding || methyl-CpNpG binding || adenyl ribonucleotide binding || histone binding || adenyl nucleotide binding || zinc ion binding || structure-specific DNA binding || translation initiation factor activity || organic cyclic compound binding || nucleotide binding || small molecule binding || methyl-CpG binding || ATP binding |
| Molecular Function (MF) |
organic cyclic compound binding |
9.082e-07 |
0.846 |
Moderately Informative |
DIRECT |
| Molecular Function (MF) |
heterocyclic compound binding |
5.741e-07 |
0.8932 |
Moderately Informative |
DIRECT |
| Molecular Function (MF) |
protein binding |
1 |
0.77 |
Moderately Informative |
INHERITED FROM: histone binding |
| Molecular Function (MF) |
transferase activity, transferring phosphorus-containing groups |
0.004075 |
1.134 |
Moderately Informative |
INHERITED FROM: nucleotidyltransferase activity || sulfate adenylyltransferase activity || adenylylsulfate kinase activity || sulfate adenylyltransferase (ATP) activity || adenylyltransferase activity |
| Molecular Function (MF) |
cation binding |
0.6605 |
1.099 |
Moderately Informative |
INHERITED FROM: zinc ion binding |
| Molecular Function (MF) |
anion binding |
0.7993 |
1.076 |
Moderately Informative |
INHERITED FROM: ATP binding |
| Molecular Function (MF) |
nucleotide binding |
1.408e-07 |
1.448 |
Informative |
DIRECT |
| Molecular Function (MF) |
peptidase activity |
7.141e-05 |
1.502 |
Informative |
DIRECT |
| Molecular Function (MF) |
nucleotidyltransferase activity |
0 |
1.474 |
Informative |
DIRECT |
| Molecular Function (MF) |
ligase activity, forming carbon-nitrogen bonds |
3.729e-08 |
1.448 |
Informative |
DIRECT |
| Molecular Function (MF) |
DNA binding |
0.76 |
1.423 |
Informative |
INHERITED FROM: structure-specific DNA binding || mitochondrial light strand promoter anti-sense binding || methyl-CpG binding || hemi-methylated DNA-binding |
| Molecular Function (MF) |
nucleoside-triphosphatase activity |
0.006583 |
1.502 |
Informative |
INHERITED FROM: ATPase activity, coupled || ATPase activity || ATP-dependent peptidase activity |
| Molecular Function (MF) |
transferase activity, transferring one-carbon groups |
0.008082 |
1.679 |
Informative |
INHERITED FROM: histone methyltransferase activity || methyltransferase activity |
| Molecular Function (MF) |
transition metal ion binding |
0.02522 |
1.317 |
Informative |
INHERITED FROM: zinc ion binding |
| Molecular Function (MF) |
kinase activity |
1 |
1.474 |
Informative |
INHERITED FROM: adenylylsulfate kinase activity |
| Molecular Function (MF) |
phosphotransferase activity, alcohol group as acceptor |
1 |
1.599 |
Informative |
INHERITED FROM: adenylylsulfate kinase activity |
| Molecular Function (MF) |
RNA binding |
0.1541 |
1.4 |
Informative |
INHERITED FROM: translation initiation factor activity |
| Molecular Function (MF) |
ATP binding |
6.558e-05 |
1.98 |
Highly Informative |
DIRECT |
| Molecular Function (MF) |
methyltransferase activity |
9.049e-06 |
1.833 |
Highly Informative |
DIRECT |
| Molecular Function (MF) |
zinc ion binding |
0.0007005 |
1.833 |
Highly Informative |
DIRECT |
| Molecular Function (MF) |
small conjugating protein ligase activity |
1.105e-09 |
1.833 |
Highly Informative |
DIRECT |
| Molecular Function (MF) |
structure-specific DNA binding |
3.151e-07 |
2.076 |
Highly Informative |
DIRECT |
| Molecular Function (MF) |
adenylyltransferase activity |
3.876e-11 |
2.076 |
Highly Informative |
DIRECT |
| Molecular Function (MF) |
endopeptidase activity |
0.6084 |
1.775 |
Highly Informative |
INHERITED FROM: serine-type endopeptidase activity |
| Molecular Function (MF) |
serine-type peptidase activity |
0.0703 |
2.201 |
Highly Informative |
INHERITED FROM: serine-type endopeptidase activity |
| Molecular Function (MF) |
translation factor activity, nucleic acid binding |
0.04612 |
1.98 |
Highly Informative |
INHERITED FROM: translation initiation factor activity |
| Cellular Component (CC) |
nuclear chromosome |
0.0007314 |
2.064 |
-- |
DIRECT |
| Cellular Component (CC) |
replication fork |
1.42e-05 |
2.241 |
-- |
DIRECT |
| Cellular Component (CC) |
nucleolus |
0.0002183 |
1.763 |
-- |
DIRECT |
| Cellular Component (CC) |
nucleoid |
8.661e-09 |
2.542 |
-- |
DIRECT |
| Cellular Component (CC) |
membrane-enclosed lumen |
1.867e-06 |
0.9395 |
-- |
DIRECT |
| Cellular Component (CC) |
organelle lumen |
1.554e-07 |
1.023 |
-- |
DIRECT |
| Cellular Component (CC) |
Cul4-RING ubiquitin ligase complex |
1.581e-10 |
2.542 |
-- |
DIRECT |
| Cellular Component (CC) |
cytoplasm |
1 |
0.2515 |
-- |
INHERITED FROM: microbody lumen || microbody part || microbody || peroxisomal matrix |
| Cellular Component (CC) |
macromolecular complex |
1 |
0.4276 |
-- |
INHERITED FROM: Cul4A-RING ubiquitin ligase complex || ubiquitin ligase complex || Cul4-RING ubiquitin ligase complex |
| Cellular Component (CC) |
peroxisome |
1 |
2.542 |
-- |
INHERITED FROM: peroxisomal matrix |
| Cellular Component (CC) |
peroxisomal part |
0.003468 |
2.542 |
-- |
INHERITED FROM: peroxisomal matrix |
| Cellular Component (CC) |
organelle |
0.771 |
0.1836 |
-- |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || microbody lumen || organelle lumen || replication fork || microbody || heterochromatin || nucleolus || nuclear chromosome || euchromatin || microbody part || nuclear chromosome part || peroxisomal matrix |
| Cellular Component (CC) |
organelle part |
0.2727 |
0.3713 |
-- |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || microbody lumen || organelle lumen || replication fork || heterochromatin || nucleolus || nuclear chromosome || euchromatin || microbody part || nuclear chromosome part || peroxisomal matrix |
| Cellular Component (CC) |
intracellular |
0.1699 |
0.1266 |
-- |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || microbody lumen || replication fork || microbody || Cul4A-RING ubiquitin ligase complex || heterochromatin || ubiquitin ligase complex || nucleolus || Cul4-RING ubiquitin ligase complex || nuclear chromosome || euchromatin || microbody part || nuclear chromosome part || peroxisomal matrix |
| Cellular Component (CC) |
intracellular part |
0.1516 |
0.1266 |
-- |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || microbody lumen || replication fork || microbody || Cul4A-RING ubiquitin ligase complex || heterochromatin || ubiquitin ligase complex || nucleolus || Cul4-RING ubiquitin ligase complex || nuclear chromosome || euchromatin || microbody part || nuclear chromosome part || peroxisomal matrix |
| Cellular Component (CC) |
intracellular organelle |
0.8055 |
0.1875 |
-- |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || microbody lumen || replication fork || microbody || heterochromatin || nucleolus || nuclear chromosome || euchromatin || microbody part || nuclear chromosome part || peroxisomal matrix |
| Cellular Component (CC) |
cellular_component |
0.01392 |
0 |
-- |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || replication fork || ubiquitin ligase complex || nuclear chromosome || euchromatin || microbody part || microbody lumen || organelle lumen || microbody || Cul4A-RING ubiquitin ligase complex || heterochromatin || nucleolus || Cul4-RING ubiquitin ligase complex || nucleoid || membrane-enclosed lumen || nuclear chromosome part || peroxisomal matrix |
| Cellular Component (CC) |
cell |
1 |
0.08068 |
-- |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || replication fork || ubiquitin ligase complex || nuclear chromosome || euchromatin || microbody part || microbody lumen || microbody || Cul4A-RING ubiquitin ligase complex || heterochromatin || nucleolus || Cul4-RING ubiquitin ligase complex || nuclear chromosome part || peroxisomal matrix |
| Cellular Component (CC) |
cell part |
1 |
0.08068 |
-- |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || replication fork || ubiquitin ligase complex || nuclear chromosome || euchromatin || microbody part || microbody lumen || microbody || Cul4A-RING ubiquitin ligase complex || heterochromatin || nucleolus || Cul4-RING ubiquitin ligase complex || nuclear chromosome part || peroxisomal matrix |
| Cellular Component (CC) |
nuclear lumen |
0.7153 |
1.161 |
-- |
INHERITED FROM: nuclear chromatin || nuclear chromosome part || nucleolus || nuclear chromosome |
| Cellular Component (CC) |
membrane-bounded organelle |
0.06235 |
0.2912 |
-- |
INHERITED FROM: nuclear chromatin || microbody lumen || microbody || nucleolus || nuclear chromosome || microbody part || nuclear chromosome part || peroxisomal matrix |
| Cellular Component (CC) |
chromosomal part |
0.003228 |
1.587 |
-- |
INHERITED FROM: nuclear chromatin || heterochromatin || nuclear chromosome part || replication fork || euchromatin |
| Cellular Component (CC) |
nucleus |
0.309 |
0.7857 |
-- |
INHERITED FROM: nuclear chromatin || nuclear chromosome || nuclear chromosome part || nucleolus |
| Cellular Component (CC) |
non-membrane-bounded organelle |
0.01298 |
0.6225 |
-- |
INHERITED FROM: nuclear chromatin || nuclear chromosome || euchromatin || heterochromatin || nuclear chromosome part || replication fork || nucleolus |
| Cellular Component (CC) |
cytoplasmic part |
1 |
0.2605 |
Least Informative |
INHERITED FROM: microbody lumen || microbody part || microbody || peroxisomal matrix |
| Cellular Component (CC) |
protein complex |
1 |
0.5639 |
Least Informative |
INHERITED FROM: Cul4A-RING ubiquitin ligase complex || ubiquitin ligase complex || Cul4-RING ubiquitin ligase complex |
| Cellular Component (CC) |
intracellular organelle part |
0.2058 |
0.3893 |
Least Informative |
INHERITED FROM: nuclear chromatin || intracellular organelle lumen || microbody lumen || replication fork || heterochromatin || nucleolus || nuclear chromosome || euchromatin || microbody part || nuclear chromosome part || peroxisomal matrix |
| Cellular Component (CC) |
intracellular membrane-bounded organelle |
0.05874 |
0.2961 |
Least Informative |
INHERITED FROM: nuclear chromatin || microbody lumen || microbody || nucleolus || nuclear chromosome || microbody part || nuclear chromosome part || peroxisomal matrix |
| Cellular Component (CC) |
intracellular non-membrane-bounded organelle |
0.01357 |
0.6225 |
Least Informative |
INHERITED FROM: nuclear chromatin || nuclear chromosome || euchromatin || heterochromatin || nuclear chromosome part || replication fork || nucleolus |
| Cellular Component (CC) |
intracellular organelle lumen |
3.743e-07 |
1.023 |
Moderately Informative |
DIRECT |
| Cellular Component (CC) |
nuclear part |
0.02601 |
0.9505 |
Moderately Informative |
INHERITED FROM: nuclear chromatin || nuclear chromosome || nuclear chromosome part || nucleolus |
| Cellular Component (CC) |
ubiquitin ligase complex |
5.799e-06 |
1.638 |
Informative |
DIRECT |
| Cellular Component (CC) |
microbody |
4.046e-06 |
1.587 |
Informative |
DIRECT |
| Cellular Component (CC) |
chromosome |
0.01504 |
1.462 |
Informative |
INHERITED FROM: nuclear chromatin || heterochromatin || nuclear chromosome part || replication fork || nuclear chromosome || euchromatin |
| Cellular Component (CC) |
microbody part |
1.07e-07 |
1.94 |
Highly Informative |
DIRECT |
| Cellular Component (CC) |
nuclear chromosome part |
0.0002027 |
2.064 |
Highly Informative |
DIRECT |
| Cellular Component (CC) |
cullin-RING ubiquitin ligase complex |
0.1486 |
1.763 |
Highly Informative |
INHERITED FROM: Cul4-RING ubiquitin ligase complex || Cul4A-RING ubiquitin ligase complex |
| Cellular Component (CC) |
chromatin |
0.00372 |
2.064 |
Highly Informative |
INHERITED FROM: heterochromatin || nuclear chromatin || euchromatin |
0
11157739
