SUPERFAMILY 1.75 HMM library and genome assignments server

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GS domain family

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All beta proteins [ 48724] (174)
Fold:   HSP20-like chaperones [ 49763]
Superfamily:   HSP20-like chaperones [ 49764] (4)
Family:   GS domain [ 101580] (2)


Family statistics
Genomes (64) Uniprot 2017_06 genome PDB chains (SCOP 1.75)
Domains 182 337 2
Proteins 182 336 2


Gene Ontology (high-coverage)

(
show details)
GO term FDR (all) SDFO level Annotation (direct or inherited)
Biological Process (BP) biological regulation 0.0007537 Least Informative Direct
Biological Process (BP) organonitrogen compound metabolic process 0.6491 Least Informative Inherited
Biological Process (BP) single-organism cellular process 1 Least Informative Inherited
Biological Process (BP) primary metabolic process 1 Least Informative Inherited
Biological Process (BP) macromolecule metabolic process 0.6917 Least Informative Inherited
Biological Process (BP) organic substance catabolic process 0.01331 Moderately Informative Inherited
Biological Process (BP) regulation of response to stimulus 0.003557 Moderately Informative Inherited
Biological Process (BP) cellular catabolic process 0.008816 Moderately Informative Inherited
Biological Process (BP) cellular protein metabolic process 0.1458 Moderately Informative Inherited
Biological Process (BP) regulation of biological quality 0.1939 Moderately Informative Inherited
Biological Process (BP) proteolysis 0.0006522 Informative Direct
Biological Process (BP) cell cycle 0.0001564 Informative Direct
Biological Process (BP) macromolecule catabolic process 0.0003478 Informative Direct
Biological Process (BP) regulation of cell cycle 0.00000001044 Informative Direct
Biological Process (BP) regulation of response to stress 0.000000003345 Informative Direct
Biological Process (BP) organonitrogen compound catabolic process 0.0007746 Informative Direct
Biological Process (BP) regulation of organelle organization 0.00132 Informative Inherited
Biological Process (BP) protein folding 0.000000005649 Highly Informative Direct
Biological Process (BP) protein catabolic process 0.00001844 Highly Informative Direct
Biological Process (BP) regulation of protein stability 0.0000000001321 Highly Informative Direct
Biological Process (BP) modification-dependent macromolecule catabolic process 0.000005548 Highly Informative Direct
Biological Process (BP) regulation of cellular response to stress 0.000000009742 Highly Informative Direct
Cellular Component (CC) macromolecular complex 0.0282 Least Informative Inherited
Cellular Component (CC) catalytic complex 0.04636 Moderately Informative Inherited
Cellular Component (CC) ubiquitin ligase complex 0.0000006505 Informative Direct

Document: GO annotation of SCOP domains

UniProtKB KeyWords (KW)

(show details)
KW termFDR (all)SDKW levelAnnotation (direct or inherited)
Biological processUbl conjugation pathway0InformativeDirect
Biological processStress response0.000000006002InformativeDirect
Coding sequence diversityAlternative splicing0.0007459Least InformativeDirect
DomainRepeat0Least InformativeDirect
DomainTPR repeat0.000000000001611Highly InformativeDirect
Molecular functionZinc0.0000000000002179Least InformativeDirect
Molecular functionMetal-binding0.000001608Least InformativeDirect
Post-translational modificationChaperone0.0000004658InformativeDirect
Post-translational modificationPhosphoprotein0.00000000003226Least InformativeDirect
Post-translational modificationAcetylation0.000001389Least InformativeDirect
Post-translational modificationIsopeptide bond0.0007286Moderately InformativeDirect

Document: KW annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Gene Ontology (high-coverage) · UniProtKB KeyWords (KW) ]

Internal database links

   
Superfamily level     Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


   
Superfamily level     Family level

Alignments of sequences to 8 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Superfamily level

Browse and view proteins in genomes which have different domain combinations including a HSP20-like chaperones domain.


   
Superfamily level     Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Jump to [ Top of page · SCOP classification · Gene Ontology (high-coverage) · UniProtKB KeyWords (KW) · Internal database links ]