SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Mitochondrial carrier family

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Membrane and cell surface proteins and peptides [ 56835] (58)
Fold:   Mitochondrial carrier [ 103505]
Superfamily:   Mitochondrial carrier [ 103506]
Family:   Mitochondrial carrier [ 103507]


Family statistics
Genomes (502) Uniprot 2018_03 genome PDB chains (SCOP 1.75)
Domains 4,507 11,391 1
Proteins 4,500 11,370 1


Disease Ontology (DO)

(
show details)
DO termFDR (all)SDDO levelAnnotation (direct or inherited)
Disease Ontology (DO)nervous system disease0.1976Least InformativeInherited

Document: DO annotation of SCOP domains

Human Phenotype (HP)

(show details)
HP termFDR (all)SDHP levelAnnotation (direct or inherited)
Phenotypic Abnormality (PA)Abnormality of metabolism/homeostasis0.04612Least InformativeInherited
Phenotypic Abnormality (PA)Abnormality of nervous system physiology0.2683Least InformativeInherited
Phenotypic Abnormality (PA)Abnormality of the genitourinary system0.5106Least InformativeInherited
Phenotypic Abnormality (PA)Abnormality of the urinary system physiology0.07094Moderately InformativeInherited
Phenotypic Abnormality (PA)Abnormal circulating metabolite concentration0.09647Moderately InformativeInherited
Phenotypic Abnormality (PA)Abnormal homeostasis0.1712Moderately InformativeInherited
Phenotypic Abnormality (PA)Abnormality of higher mental function0.316Moderately InformativeInherited
Phenotypic Abnormality (PA)Reduced consciousness/confusion0.0002476InformativeDirect
Phenotypic Abnormality (PA)Encephalopathy0.0004512InformativeDirect
Phenotypic Abnormality (PA)Azotemia0.0009621InformativeDirect
Phenotypic Abnormality (PA)Aciduria0.105InformativeInherited
Phenotypic Abnormality (PA)Acidosis0.6255InformativeInherited
Phenotypic Abnormality (PA)Lactic acidosis0.00001199Highly InformativeDirect
Phenotypic Abnormality (PA)Hyperammonemia0.00004496Highly InformativeDirect
Phenotypic Abnormality (PA)Organic aciduria0.0001356Highly InformativeDirect

Document: HP annotation of SCOP domains

Mouse Phenotype (MP)

(show details)
MP termFDR (all)SDMP levelAnnotation (direct or inherited)
Mammalian Phenotype (MP)cellular phenotype0.2979Least InformativeInherited

Document: MP annotation of SCOP domains

Worm Phenotype (WP)

(show details)
WP termFDR (all)SDWP levelAnnotation (direct or inherited)
Worm Phenotype (WP)slow growth0Least InformativeDirect
Worm Phenotype (WP)progeny variant0.00057Least InformativeDirect
Worm Phenotype (WP)larval arrest0.0006895Least InformativeDirect

Document: WP annotation of SCOP domains

Yeast Phenotype (YP)

(show details)
YP termFDR (all)SDYP levelAnnotation (direct or inherited)
Yeast Phenotype (YP)metabolism and growth0.0001964Least InformativeDirect

Document: YP annotation of SCOP domains

Fly Anatomy (FA)

(show details) Document: FA annotation of SCOP domains

Zebrafish Anatomy (ZA)

(show details)
ZA termFDR (all)SDZA levelAnnotation (direct or inherited)
Zebrafish Anatomy (ZA)digestive system0.01988InformativeInherited
Zebrafish Anatomy (ZA)gut0.0007765Highly InformativeDirect

Document: ZA annotation of SCOP domains

Xenopus Anatomy (XA)

(show details)
XA termFDR (all)SDXA levelAnnotation (direct or inherited)
Xenopus DEvelopment stage (XDE)unspecified stage0.0000003585Moderately InformativeDirect

Document: XA annotation of SCOP domains

Arabidopsis Plant Ontology (AP)

(show details)
AP termFDR (all)SDAP levelAnnotation (direct or inherited)
Plant ANatomical entity (PAN)leaf lamina0.0003856Least InformativeDirect
Plant ANatomical entity (PAN)seed0.0003975Least InformativeDirect
Plant ANatomical entity (PAN)androecium0.004644Least InformativeInherited
Plant ANatomical entity (PAN)branch0.009599Least InformativeInherited
Plant ANatomical entity (PAN)gynoecium0.01058Least InformativeInherited
Plant ANatomical entity (PAN)sporangium0.0129Least InformativeInherited
Plant ANatomical entity (PAN)megasporophyll0.02144Least InformativeInherited
Plant ANatomical entity (PAN)microgametophyte0.04663Least InformativeInherited
Plant ANatomical entity (PAN)inflorescence0.2002Least InformativeInherited
Plant ANatomical entity (PAN)microsporophyll0.3116Least InformativeInherited
Plant ANatomical entity (PAN)vascular system0.2255InformativeInherited
Plant structure DEvelopment stage (PDE)0 seed germination stage0.0002328InformativeDirect

Document: AP annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Disease Ontology (DO) · Human Phenotype (HP) · Mouse Phenotype (MP) · Worm Phenotype (WP) · Yeast Phenotype (YP) · Fly Anatomy (FA) · Zebrafish Anatomy (ZA) · Xenopus Anatomy (XA) · Arabidopsis Plant Ontology (AP) ]

Internal database links

   
Superfamily level     Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


   
Superfamily level     Family level

Alignments of sequences to 3 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Superfamily level

Browse and view proteins in genomes which have different domain combinations including a Mitochondrial carrier domain.


   
Superfamily level     Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Jump to [ Top of page · SCOP classification · Disease Ontology (DO) · Human Phenotype (HP) · Mouse Phenotype (MP) · Worm Phenotype (WP) · Yeast Phenotype (YP) · Fly Anatomy (FA) · Zebrafish Anatomy (ZA) · Xenopus Anatomy (XA) · Arabidopsis Plant Ontology (AP) · Internal database links ]