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Citrate synthase family

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All alpha proteins [ 46456] (284)
Fold:   Citrate synthase [ 48255]
Superfamily:   Citrate synthase [ 48256]
Family:   Citrate synthase [ 48257]


Family statistics
Genomes (2,522) Uniprot 2017_06 genome PDB chains (SCOP 1.75)
Domains 4,495 28,649 13
Proteins 4,482 28,631 13


Gene Ontology (high-quality)

(
show details)
GO termFDR (singleton)FDR (all)SDFO levelAnnotation (direct or inherited)
Biological Process (BP)single-organism metabolic process0.00000000070190.000000000001158Least InformativeDirect
Biological Process (BP)primary metabolic process0.038490.01244Least InformativeInherited
Biological Process (BP)single-organism cellular process0.0000014890.00243Least InformativeInherited
Biological Process (BP)lipid metabolic process0.00027180.00001301Moderately InformativeDirect
Biological Process (BP)carboxylic acid metabolic process0.000000000000030180Moderately InformativeDirect
Biological Process (BP)fatty acid metabolic process0.0000039940.0000004709InformativeDirect
Biological Process (BP)energy derivation by oxidation of organic compounds0.0000000000052250InformativeDirect
Biological Process (BP)citrate metabolic process00Highly InformativeDirect
Biological Process (BP)aerobic respiration0.000000000000017030Highly InformativeDirect
Molecular Function (MF)transferase activity0.000000018210Least InformativeDirect
Molecular Function (MF)transferase activity, transferring acyl groups00InformativeDirect

Document: GO annotation of SCOP domains

Gene Ontology (high-coverage)

(show details)
GO term FDR (all) SDFO level Annotation (direct or inherited)
Biological Process (BP) single-organism metabolic process 0.000000000001158 Least Informative Direct
Biological Process (BP) biosynthetic process 1 Least Informative Inherited
Biological Process (BP) single-organism cellular process 0.00243 Least Informative Inherited
Biological Process (BP) primary metabolic process 0.01244 Least Informative Inherited
Biological Process (BP) carbohydrate metabolic process 0.00000000001843 Moderately Informative Direct
Biological Process (BP) lipid metabolic process 0.00001301 Moderately Informative Direct
Biological Process (BP) carboxylic acid metabolic process 0 Moderately Informative Direct
Biological Process (BP) cofactor metabolic process 0.006032 Moderately Informative Inherited
Biological Process (BP) single-organism catabolic process 0.6534 Moderately Informative Inherited
Biological Process (BP) cellular catabolic process 0.3772 Moderately Informative Inherited
Biological Process (BP) organic substance catabolic process 0.9365 Moderately Informative Inherited
Biological Process (BP) fatty acid metabolic process 0.0000004709 Informative Direct
Biological Process (BP) energy derivation by oxidation of organic compounds 0 Informative Direct
Biological Process (BP) lipid catabolic process 0.0005662 Informative Direct
Biological Process (BP) sulfur compound biosynthetic process 0.000009016 Informative Direct
Biological Process (BP) coenzyme biosynthetic process 0.006877 Informative Inherited
Biological Process (BP) citrate metabolic process 0 Highly Informative Direct
Biological Process (BP) aerobic respiration 0 Highly Informative Direct
Biological Process (BP) cellular lipid catabolic process 0.00006808 Highly Informative Direct
Molecular Function (MF) transferase activity 0 Least Informative Direct
Molecular Function (MF) transferase activity, transferring acyl groups 0 Informative Direct
Cellular Component (CC) cytoplasmic part 0.00000000000001387 Least Informative Direct
Cellular Component (CC) intracellular organelle part 0.09489 Least Informative Inherited
Cellular Component (CC) intracellular membrane-bounded organelle 0.001194 Least Informative Inherited
Cellular Component (CC) mitochondrial part 0 Moderately Informative Direct
Cellular Component (CC) intracellular organelle lumen 0.0000001944 Moderately Informative Direct
Cellular Component (CC) mitochondrial matrix 0 Informative Direct
Cellular Component (CC) microbody 0.0007103 Informative Direct

Document: GO annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)ATP citrate synthase0.00004133Highly InformativeDirect

Document: EC annotation of SCOP domains

UniProtKB KeyWords (KW)

(show details)
KW termFDR (all)SDKW levelAnnotation (direct or inherited)
Biological processLipid metabolism0.0002167Moderately InformativeDirect
Biological processLipid biosynthesis0.00000005015InformativeDirect
Biological processTricarboxylic acid cycle0Highly InformativeDirect
Cellular componentMitochondrion0Moderately InformativeDirect
Cellular componentPeroxisome0.000000045InformativeDirect
DomainTransit peptide0Moderately InformativeDirect
Post-translational modificationTransferase0Least InformativeDirect
Post-translational modificationAcetylation0.00003708Least InformativeDirect

Document: KW annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Gene Ontology (high-quality) · Gene Ontology (high-coverage) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) ]

Internal database links

   
Superfamily level     Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


   
Superfamily level     Family level

Alignments of sequences to 8 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Superfamily level

Browse and view proteins in genomes which have different domain combinations including a Citrate synthase domain.


   
Superfamily level     Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Jump to [ Top of page · SCOP classification · Gene Ontology (high-quality) · Gene Ontology (high-coverage) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) · Internal database links ]