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UDP-Glycosyltransferase/glycogen phosphorylase superfamily

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Alpha and beta proteins (a/b) [ 51349] (147)
Fold:   UDP-Glycosyltransferase/glycogen phosphorylase [ 53755]
Superfamily:   UDP-Glycosyltransferase/glycogen phosphorylase [ 53756] (11)
Families:   beta-Glucosyltransferase (DNA-modifying) [ 53757]
  Peptidoglycan biosynthesis glycosyltransferase MurG [ 53760]
  UDP-N-acetylglucosamine 2-epimerase [ 53763]
  Gtf glycosyltransferase [ 64178] (3)
  ADP-heptose LPS heptosyltransferase II [ 89784]
  Trehalose-6-phosphate synthase, OtsA [ 82540]
  Oligosaccharide phosphorylase [ 53766] (2)
  Glycosyl transferases group 1 [ 110734] (3)
  Sialyltransferase-like [ 142773]
  UDPGT-like [ 159785] (4)
  FucT-like [ 159794]


Superfamily statistics
Genomes (3,150) Uniprot 2018_03 genome PDB chains (SCOP 1.75)
Domains 83,579 570,433 44
Proteins 81,324 560,416 44


Functional annotation
General category Metabolism
Detailed category Polysaccharide metabolism and transport

Document:
Function annotation of SCOP domain superfamilies

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Isomerases1Least InformativeInherited
Enzyme Commission (EC)Glycosyltransferases0Moderately InformativeDirect
Enzyme Commission (EC)Racemases and epimerases0.4591Moderately InformativeInherited
Enzyme Commission (EC)Acting on carbohydrates and derivatives0.00001553InformativeDirect

Document: EC annotation of SCOP domains

Disease Ontology (DO)

(show details)
DO termFDR (all)SDDO levelAnnotation (direct or inherited)
Disease Ontology (DO)disease of metabolism0.02999Moderately InformativeInherited

Document: DO annotation of SCOP domains

Human Phenotype (HP)

(show details)
HP termFDR (all)SDHP levelAnnotation (direct or inherited)
Phenotypic Abnormality (PA)Abnormality of metabolism/homeostasis0.001812Least InformativeInherited
Phenotypic Abnormality (PA)Abnormality of the musculature0.03012Least InformativeInherited
Phenotypic Abnormality (PA)Abnormality of nervous system physiology0.1637Least InformativeInherited
Phenotypic Abnormality (PA)Abnormality of skeletal morphology0.4811Least InformativeInherited
Phenotypic Abnormality (PA)Abnormality of limbs0.6598Least InformativeInherited
Phenotypic Abnormality (PA)Abnormality of the thorax0.3452Moderately InformativeInherited
Phenotypic Abnormality (PA)Abnormality of the upper limb0.382Moderately InformativeInherited
Phenotypic Abnormality (PA)Abnormality of the musculature of the limbs0.0948InformativeInherited
Phenotypic Abnormality (PA)Abnormal nervous system electrophysiology0.1199InformativeInherited
Phenotypic Abnormality (PA)Scapular winging0.0004489Highly InformativeDirect
Phenotypic Abnormality (PA)EEG with generalized epileptiform discharges0.001167Highly InformativeInherited

Document: HP annotation of SCOP domains

Mouse Phenotype (MP)

(show details)
MP termFDR (all)SDMP levelAnnotation (direct or inherited)
Mammalian Phenotype (MP)abnormal homeostasis0.3971Least InformativeInherited
Mammalian Phenotype (MP)abnormal glucose homeostasis0.05976InformativeInherited
Mammalian Phenotype (MP)abnormal glycogen homeostasis0.003635Highly InformativeInherited

Document: MP annotation of SCOP domains

Worm Phenotype (WP)

(show details) Document: WP annotation of SCOP domains

Xenopus Anatomy (XA)

(show details) Document: XA annotation of SCOP domains

Arabidopsis Plant Ontology (AP)

(show details)
AP termFDR (all)SDAP levelAnnotation (direct or inherited)
Plant ANatomical entity (PAN)shoot axis0.8526Least InformativeInherited
Plant ANatomical entity (PAN)portion of meristem tissue1Least InformativeInherited
Plant ANatomical entity (PAN)root system1Least InformativeInherited
Plant ANatomical entity (PAN)cardinal part of multi-tissue plant structure1Least InformativeInherited
Plant ANatomical entity (PAN)primordium0.0000000266InformativeDirect
Plant ANatomical entity (PAN)root tip0.00001509InformativeDirect
Plant ANatomical entity (PAN)vegetative shoot apex0.00000000001332Highly InformativeDirect
Plant ANatomical entity (PAN)phyllome primordium0.00000000002048Highly InformativeDirect
Plant ANatomical entity (PAN)lateral root primordium0.00002953Highly InformativeDirect
Plant ANatomical entity (PAN)bud0.0005388Highly InformativeDirect

Document: AP annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEC levelAnnotation (direct or inherited)
Enzyme Commission (EC)Transferring phosphorus-containing groups1Least InformativeInherited
Enzyme Commission (EC)Hydrolases1Least InformativeInherited
Enzyme Commission (EC)Glycosyltransferases0Moderately InformativeDirect
Enzyme Commission (EC)Phosphotransferases with an alcohol group as acceptor1Moderately InformativeInherited
Enzyme Commission (EC)Phosphoric monoester hydrolases1Moderately InformativeInherited
Enzyme Commission (EC)Glycosylases1Moderately InformativeInherited
Enzyme Commission (EC)Isomerases1Moderately InformativeInherited
Enzyme Commission (EC)Hexosyltransferases0InformativeDirect
Enzyme Commission (EC)Racemases and epimerases0.8938InformativeInherited
Enzyme Commission (EC)Acting on carbohydrates and derivatives0.0004582Highly InformativeDirect
Enzyme Commission (EC)Transferases for other substituted phosphate groups0.01582Highly InformativeInherited
Enzyme Commission (EC)Transferring other glycosyl groups1Highly InformativeInherited

Document: EC annotation of SCOP domains

UniProtKB KeyWords (KW)

(show details)
KW termFDR (all)SDKW levelAnnotation (direct or inherited)
Post-translational modificationTransferase0.000000002079Moderately InformativeDirect

Document: KW annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Functional annotation · Enzyme Commission (EC) · Disease Ontology (DO) · Human Phenotype (HP) · Mouse Phenotype (MP) · Worm Phenotype (WP) · Xenopus Anatomy (XA) · Arabidopsis Plant Ontology (AP) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) ]

Internal database links

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


Alignments of sequences to 24 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Browse and view proteins in genomes which have different domain combinations including a UDP-Glycosyltransferase/glycogen phosphorylase domain.


Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Explore domain occurrence network where nodes represent genomes and edges are domain architectures (shared between genomes) containing the superfamily of interest.

There are 24 hidden Markov models representing the UDP-Glycosyltransferase/glycogen phosphorylase superfamily. Information on how the models are built, and plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be inspected.


Jump to [ Top of page · SCOP classification · Functional annotation · Enzyme Commission (EC) · Disease Ontology (DO) · Human Phenotype (HP) · Mouse Phenotype (MP) · Worm Phenotype (WP) · Xenopus Anatomy (XA) · Arabidopsis Plant Ontology (AP) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) · Internal database links ]