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Probable ACP-binding domain of malonyl-CoA ACP transacylase superfamily

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Alpha and beta proteins (a+b) [ 53931] (376)
Fold:   Ferredoxin-like [ 54861] (59)
Superfamily:   Probable ACP-binding domain of malonyl-CoA ACP transacylase [ 55048]
Families:   Probable ACP-binding domain of malonyl-CoA ACP transacylase [ 55049]


Superfamily statistics
Genomes (2,788) Uniprot 2018_03 genome PDB chains (SCOP 1.75)
Domains 8,662 61,160 2
Proteins 7,958 54,844 2


Functional annotation
General category Metabolism
Detailed category Lipid metabolism and transport

Document:
Function annotation of SCOP domain superfamilies

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Lyases0.3899Least InformativeInherited
Enzyme Commission (EC)Acting on ester bonds0.07992Least InformativeInherited
Enzyme Commission (EC)Oxidoreductases0.7751Least InformativeInherited
Enzyme Commission (EC)Transferring groups other than amino-acyl groups0Moderately InformativeDirect
Enzyme Commission (EC)Acting on the CH-CH group of donors0.00001928Moderately InformativeDirect
Enzyme Commission (EC)Hydro-lyases0.01338Moderately InformativeInherited
Enzyme Commission (EC)With NAD(+) or NADP(+) as acceptor0.01038Moderately InformativeInherited
Enzyme Commission (EC)Enoyl-[acyl-carrier-protein] reductase (NADPH, B-s0InformativeDirect
Enzyme Commission (EC)3-hydroxypalmitoyl-[acyl-carrier-protein] dehydrat0InformativeDirect
Enzyme Commission (EC)Fatty-acid synthase0.0000000005256InformativeDirect
Enzyme Commission (EC)[Acyl-carrier-protein] S-acetyltransferase0.000000001939InformativeDirect
Enzyme Commission (EC)Thiolester hydrolases0.000000002556InformativeDirect
Enzyme Commission (EC)[Acyl-carrier-protein] S-malonyltransferase0Highly InformativeDirect
Enzyme Commission (EC)3-oxoacyl-[acyl-carrier-protein] reductase0.00000000000001601Highly InformativeDirect
Enzyme Commission (EC)Beta-ketoacyl-acyl-carrier-protein synthase I0.000000000001198Highly InformativeDirect

Document: EC annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEC levelAnnotation (direct or inherited)
Enzyme Commission (EC)Lyases0.8292Least InformativeInherited
Enzyme Commission (EC)Hydrolases1Least InformativeInherited
Enzyme Commission (EC)Oxidoreductases1Least InformativeInherited
Enzyme Commission (EC)Transferring groups other than amino-acyl groups0Moderately InformativeDirect
Enzyme Commission (EC)Acting on the CH-OH group of donors0.03798Moderately InformativeInherited
Enzyme Commission (EC)Carbon-oxygen lyases0.1391Moderately InformativeInherited
Enzyme Commission (EC)Thiolester hydrolases0.00000002363InformativeDirect
Enzyme Commission (EC)With NAD(+) or NADP(+) as acceptor0.000002705InformativeDirect
Enzyme Commission (EC)With NAD(+) or NADP(+) as acceptor0.02668InformativeInherited
Enzyme Commission (EC)Enoyl-[acyl-carrier-protein] reductase (NADPH, Re-specific)0Highly InformativeDirect
Enzyme Commission (EC)[Acyl-carrier-protein] S-malonyltransferase0Highly InformativeDirect
Enzyme Commission (EC)Beta-ketoacyl-[acyl-carrier-protein] synthase I0Highly InformativeDirect
Enzyme Commission (EC)Oleoyl-[acyl-carrier-protein] hydrolase5.087e-16Highly InformativeDirect
Enzyme Commission (EC)3-oxoacyl-[acyl-carrier-protein] reductase0.0000000000001395Highly InformativeDirect
Enzyme Commission (EC)Fatty-acid synthase system0.0000000009214Highly InformativeDirect
Enzyme Commission (EC)[Acyl-carrier-protein] S-acetyltransferase0.00000001554Highly InformativeDirect
Enzyme Commission (EC)2-methylbutanoate polyketide synthase0.0000000792Highly InformativeDirect
Enzyme Commission (EC)Lovastatin nonaketide synthase0.0000002428Highly InformativeDirect

Document: EC annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Functional annotation · Enzyme Commission (EC) · Enzyme Commission (EC) ]

Internal database links

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


Alignments of sequences to 3 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Browse and view proteins in genomes which have different domain combinations including a Probable ACP-binding domain of malonyl-CoA ACP transacylase domain.


Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Explore domain occurrence network where nodes represent genomes and edges are domain architectures (shared between genomes) containing the superfamily of interest.

There are 3 hidden Markov models representing the Probable ACP-binding domain of malonyl-CoA ACP transacylase superfamily. Information on how the models are built, and plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be inspected.


Jump to [ Top of page · SCOP classification · Functional annotation · Enzyme Commission (EC) · Enzyme Commission (EC) · Internal database links ]