SUPERFAMILY 1.75 HMM library and genome assignments server

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5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain family

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Alpha and beta proteins (a+b) [ 53931] (376)
Fold:   5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain [ 55815]
Superfamily:   5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain [ 55816]
Family:   5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain [ 55817]


Family statistics
Genomes (1,202) Uniprot 2017_06 genome PDB chains (SCOP 1.75)
Domains 1,675 8,388 7
Proteins 1,671 8,347 7


Gene Ontology (high-coverage)

(
show details)
GO term FDR (all) SDFO level Annotation (direct or inherited)
Biological Process (BP) heterocycle metabolic process 0.00002974 Least Informative Direct
Biological Process (BP) cellular aromatic compound metabolic process 0.00003519 Least Informative Direct
Biological Process (BP) organic cyclic compound metabolic process 0.0000745 Least Informative Direct
Biological Process (BP) cellular nitrogen compound metabolic process 0.0001066 Least Informative Direct
Biological Process (BP) single-organism cellular process 0.9318 Least Informative Inherited
Biological Process (BP) primary metabolic process 0.3111 Least Informative Inherited
Biological Process (BP) single-organism metabolic process 0.04115 Least Informative Inherited
Biological Process (BP) nucleobase-containing small molecule metabolic process 0.0000004517 Moderately Informative Direct
Biological Process (BP) organophosphate metabolic process 0.0005599 Moderately Informative Direct
Biological Process (BP) phosphate-containing compound metabolic process 0.003942 Moderately Informative Inherited
Molecular Function (MF) hydrolase activity 0.000000000003646 Least Informative Direct
Molecular Function (MF) hydrolase activity, acting on ester bonds 0.00000000004865 Moderately Informative Direct
Molecular Function (MF) phosphatase activity 0.1548 Informative Inherited

Document: GO annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Acting on ester bonds0.0000000001597Least InformativeDirect
Enzyme Commission (EC)Acting on acid anhydrides0.1653Least InformativeInherited
Enzyme Commission (EC)Phosphoric monoester hydrolases0Moderately InformativeDirect
Enzyme Commission (EC)In phosphorous-containing anhydrides0.00000000001183Moderately InformativeDirect
Enzyme Commission (EC)Phosphoric diester hydrolases0.00003482InformativeDirect
Enzyme Commission (EC)5'-nucleotidase0.0000000001557Highly InformativeDirect

Document: EC annotation of SCOP domains

UniProtKB KeyWords (KW)

(show details)
KW termFDR (all)SDKW levelAnnotation (direct or inherited)
Cellular componentMembrane0.009247Least InformativeInherited
Cellular componentGPI-anchor0.000000000000003385InformativeDirect
Cellular componentPeriplasm0.0000000000003007InformativeDirect
DomainSignal0Least InformativeDirect
Molecular functionMetal-binding0.00000000000002959Least InformativeDirect
Molecular functionNucleotide-binding0.000000002883Least InformativeDirect
Molecular functionZinc0.00007676Least InformativeDirect
Post-translational modificationHydrolase0Least InformativeDirect
Post-translational modificationGlycoprotein0.0006579Least InformativeDirect
Post-translational modificationLipoprotein0.000000001626Moderately InformativeDirect

Document: KW annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Gene Ontology (high-coverage) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) ]

Internal database links

   
Superfamily level     Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


   
Superfamily level     Family level

Alignments of sequences to 3 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Superfamily level

Browse and view proteins in genomes which have different domain combinations including a 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain domain.


   
Superfamily level     Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Jump to [ Top of page · SCOP classification · Gene Ontology (high-coverage) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) · Internal database links ]