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Arabinanase/levansucrase/invertase superfamily

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All beta proteins [ 48724] (174)
Fold:   5-bladed beta-propeller [ 50933] (3)
Superfamily:   Arabinanase/levansucrase/invertase [ 75005] (5)
Families:   alpha-L-arabinanase-like [ 75006] (4)
  Levansucrase [ 101881]
  Glycosyl hydrolases family 32 N-terminal domain [ 101884] (2)
  TM1225-like predicted glycosylases [ 110284]
  LmjF10.1260-like [ 141543]


Superfamily statistics
Genomes (1,739) Uniprot 2017_06 genome PDB chains (SCOP 1.75)
Domains 8,560 58,588 20
Proteins 8,245 55,988 20


Functional annotation
General category Metabolism
Detailed category Other enzymes

Document:
Function annotation of SCOP domain superfamilies

Gene Ontology (high-quality)

(show details)
GO termFDR (singleton)FDR (all)SDFO levelAnnotation (direct or inherited)
Biological Process (BP)primary metabolic process0.32110.5203Least InformativeInherited
Biological Process (BP)macromolecule metabolic process0.31821Least InformativeInherited
Biological Process (BP)carbohydrate metabolic process0.0000033220Moderately InformativeDirect
Biological Process (BP)organic substance catabolic process0.029530.0006585Moderately InformativeInherited
Biological Process (BP)polysaccharide metabolic process0.00017360.0000003613InformativeDirect
Biological Process (BP)carbohydrate catabolic process0.0041850.0000008835InformativeInherited
Biological Process (BP)polysaccharide catabolic process0.0000010250.000005937Highly InformativeDirect
Molecular Function (MF)hydrolase activity0.0047530.0000003745Least InformativeInherited
Molecular Function (MF)hydrolase activity, acting on glycosyl bonds0.000000000057030InformativeDirect

Document: GO annotation of SCOP domains

Gene Ontology (high-coverage)

(show details)
GO term FDR (all) SDFO level Annotation (direct or inherited)
Biological Process (BP) primary metabolic process 0.5203 Least Informative Inherited
Biological Process (BP) single-organism cellular process 1 Least Informative Inherited
Biological Process (BP) single-organism metabolic process 0.5969 Least Informative Inherited
Biological Process (BP) macromolecule metabolic process 1 Least Informative Inherited
Biological Process (BP) carbohydrate metabolic process 0 Moderately Informative Direct
Biological Process (BP) organic substance catabolic process 0.0006585 Moderately Informative Direct
Biological Process (BP) single-organism catabolic process 0.01888 Moderately Informative Inherited
Biological Process (BP) cellular catabolic process 0.1386 Moderately Informative Inherited
Biological Process (BP) polysaccharide metabolic process 0.0000003613 Informative Direct
Biological Process (BP) carbohydrate catabolic process 0.0000008835 Informative Direct
Biological Process (BP) cellular carbohydrate metabolic process 0.0000003805 Informative Direct
Biological Process (BP) polysaccharide catabolic process 0.000005937 Highly Informative Direct
Biological Process (BP) oligosaccharide catabolic process 0.000001753 Highly Informative Direct
Biological Process (BP) cellular carbohydrate catabolic process 0.0000006958 Highly Informative Direct
Molecular Function (MF) hydrolase activity 0.0000003745 Least Informative Direct
Molecular Function (MF) hydrolase activity, acting on glycosyl bonds 0 Informative Direct
Molecular Function (MF) hydrolase activity, hydrolyzing O-glycosyl compounds 0.1178 Highly Informative Inherited

Document: GO annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Glycosidases, i.e. enzymes hydrolyzing O- and S-gl0Moderately InformativeDirect
Enzyme Commission (EC)Glycosyltransferases0.002268Moderately InformativeInherited
Enzyme Commission (EC)Alpha-N-arabinofuranosidase0.000000001906Highly InformativeDirect

Document: EC annotation of SCOP domains

UniProtKB KeyWords (KW)

(show details)
KW termFDR (all)SDKW levelAnnotation (direct or inherited)
Biological processCarbohydrate metabolism0Moderately InformativeDirect
Biological processPolysaccharide degradation2.442e-16InformativeDirect
Cellular componentSecreted0Moderately InformativeDirect
Cellular componentVacuole6.573e-16InformativeDirect
Cellular componentApoplast0Highly InformativeDirect
Cellular componentCell wall0.0000000000000326Highly InformativeDirect
DomainSignal0Least InformativeDirect
DomainTransmembrane1Least InformativeInherited
DomainSignal-anchor0.0000000004068InformativeDirect
Molecular functionCalcium0.00001474Moderately InformativeDirect
Post-translational modificationHydrolase0Least InformativeDirect
Post-translational modificationTransferase1Least InformativeInherited
Post-translational modificationGlycosidase0InformativeDirect
Post-translational modificationGlycosyltransferase0.0000000003194InformativeDirect
Post-translational modificationGlycoprotein0Least InformativeDirect
Post-translational modificationZymogen0.00005799InformativeDirect

Document: KW annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Functional annotation · Gene Ontology (high-quality) · Gene Ontology (high-coverage) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) ]

Internal database links

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


Alignments of sequences to 12 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Browse and view proteins in genomes which have different domain combinations including a Arabinanase/levansucrase/invertase domain.


Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Explore domain occurrence network where nodes represent genomes and edges are domain architectures (shared between genomes) containing the superfamily of interest.

There are 12 hidden Markov models representing the Arabinanase/levansucrase/invertase superfamily. Information on how the models are built, and plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be inspected.


Jump to [ Top of page · SCOP classification · Functional annotation · Gene Ontology (high-quality) · Gene Ontology (high-coverage) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) · Internal database links ]