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Deoxycytidylate deaminase-like family

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Alpha and beta proteins (a/b) [ 51349] (147)
Fold:   Cytidine deaminase-like [ 53926] (2)
Superfamily:   Cytidine deaminase-like [ 53927] (5)
Family:   Deoxycytidylate deaminase-like [ 89800] (7)


Family statistics
Genomes (2,556) Uniprot 2017_06 genome PDB chains (SCOP 1.75)
Domains 4,681 27,620 14
Proteins 4,681 27,616 14


Gene Ontology (high-quality)

(
show details)
GO termFDR (singleton)FDR (all)SDFO levelAnnotation (direct or inherited)
Biological Process (BP)cellular aromatic compound metabolic process0.00039760.000002425Least InformativeDirect
Biological Process (BP)heterocycle metabolic process0.00037730.0000000008102Least InformativeDirect
Biological Process (BP)organonitrogen compound metabolic process0.35680.7068Least InformativeInherited
Biological Process (BP)biosynthetic process0.50580.2582Least InformativeInherited
Biological Process (BP)cellular nitrogen compound metabolic process0.00130.00000001165Least InformativeInherited
Biological Process (BP)organic cyclic compound metabolic process0.001070.00000000594Least InformativeInherited
Biological Process (BP)macromolecule metabolic process0.90261Least InformativeInherited
Biological Process (BP)primary metabolic process0.16170.6646Least InformativeInherited
Biological Process (BP)heterocycle biosynthetic process0.16910.02322Moderately InformativeInherited
Biological Process (BP)cellular nitrogen compound biosynthetic process0.32810.1672Moderately InformativeInherited
Biological Process (BP)organic cyclic compound biosynthetic process0.21010.04334Moderately InformativeInherited
Biological Process (BP)gene expression0.059860.004258Moderately InformativeInherited
Biological Process (BP)macromolecule modification0.16460.009554Moderately InformativeInherited
Biological Process (BP)nucleic acid metabolic process0.25720.04038Moderately InformativeInherited
Biological Process (BP)tRNA metabolic process0.00023910.000000002267InformativeDirect
Biological Process (BP)RNA modification0.00028840.0000000000000117InformativeDirect
Biological Process (BP)ncRNA processing0.00082540.0000000135InformativeDirect
Biological Process (BP)pyrimidine-containing compound metabolic process0.00000022240.00000002444InformativeDirect
Molecular Function (MF)hydrolase activity0.0013390.00000000409Least InformativeInherited
Molecular Function (MF)hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds0.000000000036320InformativeDirect
Molecular Function (MF)hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines00Highly InformativeDirect
Molecular Function (MF)deaminase activity00Highly InformativeDirect

Document: GO annotation of SCOP domains

Gene Ontology (high-coverage)

(show details)
GO term FDR (all) SDFO level Annotation (direct or inherited)
Biological Process (BP) cellular aromatic compound metabolic process 0.000002425 Least Informative Direct
Biological Process (BP) cellular nitrogen compound metabolic process 0.00000001165 Least Informative Direct
Biological Process (BP) heterocycle metabolic process 0.0000000008102 Least Informative Direct
Biological Process (BP) organic cyclic compound metabolic process 0.00000000594 Least Informative Direct
Biological Process (BP) organonitrogen compound metabolic process 0.7068 Least Informative Inherited
Biological Process (BP) single-organism metabolic process 0.1411 Least Informative Inherited
Biological Process (BP) biosynthetic process 0.2582 Least Informative Inherited
Biological Process (BP) single-organism cellular process 1 Least Informative Inherited
Biological Process (BP) macromolecule metabolic process 1 Least Informative Inherited
Biological Process (BP) primary metabolic process 0.6646 Least Informative Inherited
Biological Process (BP) heterocycle biosynthetic process 0.02322 Moderately Informative Inherited
Biological Process (BP) cellular nitrogen compound biosynthetic process 0.1672 Moderately Informative Inherited
Biological Process (BP) organic cyclic compound biosynthetic process 0.04334 Moderately Informative Inherited
Biological Process (BP) gene expression 0.004258 Moderately Informative Inherited
Biological Process (BP) macromolecule modification 0.009554 Moderately Informative Inherited
Biological Process (BP) small molecule biosynthetic process 0.04797 Moderately Informative Inherited
Biological Process (BP) nucleic acid metabolic process 0.04038 Moderately Informative Inherited
Biological Process (BP) tRNA metabolic process 0.000000002267 Informative Direct
Biological Process (BP) vitamin metabolic process 0.00003435 Informative Direct
Biological Process (BP) RNA modification 0.0000000000000117 Informative Direct
Biological Process (BP) ncRNA processing 0.0000000135 Informative Direct
Biological Process (BP) pyrimidine-containing compound metabolic process 0.00000002444 Informative Direct
Molecular Function (MF) hydrolase activity 0.00000000409 Least Informative Direct
Molecular Function (MF) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 0 Informative Direct
Molecular Function (MF) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 0 Highly Informative Direct
Molecular Function (MF) deaminase activity 0 Highly Informative Direct

Document: GO annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Oxidoreductases0.00018Least InformativeDirect
Enzyme Commission (EC)Acting on carbon-nitrogen bonds, other than peptid0Moderately InformativeDirect
Enzyme Commission (EC)With NAD(+) or NADP(+) as acceptor0.00000000003296Moderately InformativeDirect
Enzyme Commission (EC)In cyclic amidines0InformativeDirect

Document: EC annotation of SCOP domains

UniProtKB KeyWords (KW)

(show details)
KW termFDR (all)SDKW levelAnnotation (direct or inherited)
Biological processtRNA processing0InformativeDirect
Molecular functionMetal-binding0Least InformativeDirect
Molecular functionZinc0Least InformativeDirect
Molecular functionNADP0.00002207Moderately InformativeDirect
Post-translational modificationHydrolase0Least InformativeDirect

Document: KW annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Gene Ontology (high-quality) · Gene Ontology (high-coverage) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) ]

Internal database links

   
Superfamily level     Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


   
Superfamily level     Family level

Alignments of sequences to 23 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Superfamily level

Browse and view proteins in genomes which have different domain combinations including a Cytidine deaminase-like domain.


   
Superfamily level     Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Jump to [ Top of page · SCOP classification · Gene Ontology (high-quality) · Gene Ontology (high-coverage) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) · Internal database links ]