SUPERFAMILY 1.75 HMM library and genome assignments server

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Results 1-3 of 3 for 1dq3.

  1.  
  2. SCOP classification
    Class :   Alpha and beta proteins (a+b)
    Fold :   Homing endonuclease-like
    Superfamily :   Homing endonucleases
    Family :   Intein endonuclease
    Protein :   PI-Pfui intein
    PDB Entry Domain :   1dq3 A:129-226
    PDB Entry Domain :   1dq3 A:227-335
       
       

    Superfamily Family
    Alignments Alignments
    Genome assignments Genome assignments
    Taxonomic distribution Taxonomic distribution
    Domain combinations
    Models


  3.  
  4. SCOP classification
    Class :   Alpha and beta proteins (a+b)
    Fold :   dsRBD-like
    Superfamily :   YcfA/nrd intein domain
    Family :   PI-Pfui intein middle domain
    Protein :   PI-Pfui intein middle domain
    PDB Entry Domain :   1dq3 A:336-414
       
       

    Superfamily Family
    Alignments Alignments
    Genome assignments Genome assignments
    Taxonomic distribution Taxonomic distribution
    Domain combinations
    Models


  5.  
  6. SCOP classification
    Class :   All beta proteins
    Fold :   Hedgehog/intein (Hint) domain
    Superfamily :   Hedgehog/intein (Hint) domain
    Family :   Intein (protein splicing domain)
    Protein :   PI-Pfui intein
    PDB Entry Domain :   1dq3 A:1-128,A:415-454
       
       

    Superfamily Family
    Alignments Alignments
    Genome assignments Genome assignments
    Taxonomic distribution Taxonomic distribution
    Domain combinations
    Models


Results 1-3 of 3 for 1dq3.

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You may search for a superfamily, a sequence or a genome with any of the following:

  • Superfamily name or part thereof, e.g. globin
  • SCOP classification of a superfamily, e.g. a.1.1
  • SCOP unique identifier (sunid) of a superfamily, e.g. 46458
  • InterPro superfamily accession number, e.g. SSF46458
  • PDB identifier of a member of the superfamily, e.g. 1abr
  • Hidden Markov model number, e.g. 0046853
  • Sequence identifier or accession number of a genomic sequence, e.g.:
    • gi|16131178|ref|NP_417758.1| for NCBI bacterial genomes
    • ENSP00000261267 for eukaryotic genomes from Ensembl
    • P24091 for Swiss-Prot/TrEMBL entries
  • A genome name or part thereof, e.g. arabidopsis
  • A common organism name, e.g. horse