SUPERFAMILY 1.75 HMM library and genome assignments server

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Results 1-5 of 5 for 1jv2.

  1.  
  2. SCOP classification
    Class :   All beta proteins
    Fold :   Immunoglobulin-like beta-sandwich
    Superfamily :   Integrin domains
    Family :   Integrin domains
    Protein :   Thigh, calf-1 and calf-2 domains of integrin alpha
    PDB Entry Domain :   1jv2 A:439-598
    PDB Entry Domain :   1jv2 A:599-737
    PDB Entry Domain :   1jv2 A:738-956
       
    Protein :   Hybrid domain of integrin beta
    PDB Entry Domain :   1jv2 B:55-106,B:355-434
       
       

    Superfamily Family
    Alignments Alignments
    Genome assignments Genome assignments
    Taxonomic distribution Taxonomic distribution
    Domain combinations
    Models


  3.  
  4. SCOP classification
    Class :   Small proteins
    Fold :   Knottins (small inhibitors, toxins, lectins)
    Superfamily :   EGF/Laminin
    Family :   Integrin beta EGF-like domains
    Protein :   Integrin beta EGF-like domains
    PDB Entry Domain :   1jv2 B:532-562
    PDB Entry Domain :   1jv2 B:563-605
       
       

    Superfamily Family
    Alignments Alignments
    Genome assignments Genome assignments
    Taxonomic distribution Taxonomic distribution
    Domain combinations
    Models


  5.  
  6. SCOP classification
    Class :   Alpha and beta proteins (a/b)
    Fold :   vWA-like
    Superfamily :   vWA-like
    Family :   Integrin A (or I) domain
    Protein :   Integrin beta A domain
    PDB Entry Domain :   1jv2 B:107-354
       
       

    Superfamily Family
    Alignments Alignments
    Genome assignments Genome assignments
    Taxonomic distribution Taxonomic distribution
    Domain combinations
    Models


  7.  
  8. SCOP classification
    Class :   Alpha and beta proteins (a+b)
    Fold :   Integrin beta tail domain
    Superfamily :   Integrin beta tail domain
    Family :   Integrin beta tail domain
    Protein :   Integrin beta tail domain
    PDB Entry Domain :   1jv2 B:606-690
       
       

    Superfamily Family
    Alignments Alignments
    Genome assignments Genome assignments
    Taxonomic distribution Taxonomic distribution
    Domain combinations
    Models


  9.  
  10. SCOP classification
    Class :   All beta proteins
    Fold :   7-bladed beta-propeller
    Superfamily :   Integrin alpha N-terminal domain
    Family :   Integrin alpha N-terminal domain
    Protein :   Integrin alpha N-terminal domain
    PDB Entry Domain :   1jv2 A:1-438
       
       

    Superfamily Family
    Alignments Alignments
    Genome assignments Genome assignments
    Taxonomic distribution Taxonomic distribution
    Domain combinations
    Models


Results 1-5 of 5 for 1jv2.

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You may search for a superfamily, a sequence or a genome with any of the following:

  • Superfamily name or part thereof, e.g. globin
  • SCOP classification of a superfamily, e.g. a.1.1
  • SCOP unique identifier (sunid) of a superfamily, e.g. 46458
  • InterPro superfamily accession number, e.g. SSF46458
  • PDB identifier of a member of the superfamily, e.g. 1abr
  • Hidden Markov model number, e.g. 0046853
  • Sequence identifier or accession number of a genomic sequence, e.g.:
    • gi|16131178|ref|NP_417758.1| for NCBI bacterial genomes
    • ENSP00000261267 for eukaryotic genomes from Ensembl
    • P24091 for Swiss-Prot/TrEMBL entries
  • A genome name or part thereof, e.g. arabidopsis
  • A common organism name, e.g. horse