SUPERFAMILY 1.75 HMM library and genome assignments server

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Results 1-3 of 3 for 1k82.

  1.  
  2. SCOP classification
    Class :   All alpha proteins
    Fold :   S13-like H2TH domain
    Superfamily :   S13-like H2TH domain
    Family :   Middle domain of MutM-like DNA repair proteins
    Protein :   DNA repair protein MutM (Fpg)
    PDB Entry Domain :   1k82 A:129-216
    PDB Entry Domain :   1k82 B:129-216
    PDB Entry Domain :   1k82 C:129-216
    PDB Entry Domain :   1k82 D:129-216
       
       

    Superfamily Family
    Alignments Alignments
    Genome assignments Genome assignments
    Taxonomic distribution Taxonomic distribution
    Domain combinations
    Models


  3.  
  4. SCOP classification
    Class :   All beta proteins
    Fold :   N-terminal domain of MutM-like DNA repair proteins
    Superfamily :   N-terminal domain of MutM-like DNA repair proteins
    Family :   N-terminal domain of MutM-like DNA repair proteins
    Protein :   DNA repair protein MutM (Fpg)
    PDB Entry Domain :   1k82 A:1-128
    PDB Entry Domain :   1k82 B:1-128
    PDB Entry Domain :   1k82 C:1-128
    PDB Entry Domain :   1k82 D:1-128
       
       

    Superfamily Family
    Alignments Alignments
    Genome assignments Genome assignments
    Taxonomic distribution Taxonomic distribution
    Domain combinations
    Models


  5.  
  6. SCOP classification
    Class :   Small proteins
    Fold :   Glucocorticoid receptor-like (DNA-binding domain)
    Superfamily :   Glucocorticoid receptor-like (DNA-binding domain)
    Family :   C-terminal, Zn-finger domain of MutM-like DNA repair proteins
    Protein :   DNA repair protein MutM (Fpg)
    PDB Entry Domain :   1k82 A:225-268
    PDB Entry Domain :   1k82 B:225-268
    PDB Entry Domain :   1k82 C:225-268
    PDB Entry Domain :   1k82 D:225-268
       
       

    Superfamily Family
    Alignments Alignments
    Genome assignments Genome assignments
    Taxonomic distribution Taxonomic distribution
    Domain combinations
    Models


Results 1-3 of 3 for 1k82.

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You may search for a superfamily, a sequence or a genome with any of the following:

  • Superfamily name or part thereof, e.g. globin
  • SCOP classification of a superfamily, e.g. a.1.1
  • SCOP unique identifier (sunid) of a superfamily, e.g. 46458
  • InterPro superfamily accession number, e.g. SSF46458
  • PDB identifier of a member of the superfamily, e.g. 1abr
  • Hidden Markov model number, e.g. 0046853
  • Sequence identifier or accession number of a genomic sequence, e.g.:
    • gi|16131178|ref|NP_417758.1| for NCBI bacterial genomes
    • ENSP00000261267 for eukaryotic genomes from Ensembl
    • P24091 for Swiss-Prot/TrEMBL entries
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