SUPERFAMILY 1.75 HMM library and genome assignments server

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Results 1-3 of 3 for 1or7.

  1.  
  2. SCOP classification
    Class :   All alpha proteins
    Fold :   N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
    Superfamily :   N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
    Family :   N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
    Protein :   N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
    PDB Entry Domain :   1or7 C:
    PDB Entry Domain :   1or7 F:
       
       

    Superfamily Family
    Alignments Alignments
    Genome assignments Genome assignments
    Taxonomic distribution Taxonomic distribution
    Domain combinations
    Models


  3.  
  4. SCOP classification
    Class :   All alpha proteins
    Fold :   Sigma2 domain of RNA polymerase sigma factors
    Superfamily :   Sigma2 domain of RNA polymerase sigma factors
    Family :   Sigma2 domain of RNA polymerase sigma factors
    Protein :   SigmaE factor (RpoE)
    PDB Entry Domain :   1or7 A:-1-111
    PDB Entry Domain :   1or7 B:-1-91
       
       

    Superfamily Family
    Alignments Alignments
    Genome assignments Genome assignments
    Taxonomic distribution Taxonomic distribution
    Domain combinations
    Models


  5.  
  6. SCOP classification
    Class :   All alpha proteins
    Fold :   DNA/RNA-binding 3-helical bundle
    Superfamily :   Sigma3 and sigma4 domains of RNA polymerase sigma factors
    Family :   Sigma4 domain
    Protein :   SigmaE factor (RpoE)
    PDB Entry Domain :   1or7 A:120-187
    PDB Entry Domain :   1or7 B:120-190
       
       

    Superfamily Family
    Alignments Alignments
    Genome assignments Genome assignments
    Taxonomic distribution Taxonomic distribution
    Domain combinations
    Models


Results 1-3 of 3 for 1or7.

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You may search for a superfamily, a sequence or a genome with any of the following:

  • Superfamily name or part thereof, e.g. globin
  • SCOP classification of a superfamily, e.g. a.1.1
  • SCOP unique identifier (sunid) of a superfamily, e.g. 46458
  • InterPro superfamily accession number, e.g. SSF46458
  • PDB identifier of a member of the superfamily, e.g. 1abr
  • Hidden Markov model number, e.g. 0046853
  • Sequence identifier or accession number of a genomic sequence, e.g.:
    • gi|16131178|ref|NP_417758.1| for NCBI bacterial genomes
    • ENSP00000261267 for eukaryotic genomes from Ensembl
    • P24091 for Swiss-Prot/TrEMBL entries
  • A genome name or part thereof, e.g. arabidopsis
  • A common organism name, e.g. horse