SUPERFAMILY 1.75 HMM library and genome assignments server

Search Sequences for SCOP domains

Assign SCOP domains to your sequences using the SUPERFAMILY hidden Markov models.

NEW: Get an early look at the future of SUPERFAMILY and beta test the new sequence search pages. All feedback appreciated!

Split on stop codons (nucleotide only): Yes No

Sequences:

Multiple sequence FASTA file:

Notification:
Email address: <--- Please check
Use an example sequence (1plc plastocyanin)
(show further options)

Large numbers of sequences can be accommodated by contacting superfamily@cs.bris.ac.uk.

  • Maximum 1000 sequences
  • Sequences will queue on the server, then run for at least 5 minutes
  • Results will be removed after 15 days
  • Show help