SUPERFAMILY 1.75 HMM library and genome assignments server

Please note: Superfamily is currently under maintenance and some functionality may be limited. Please bear with us as we fix these problems.

Search Sequences for SCOP domains

Assign SCOP domains to your sequences using the SUPERFAMILY hidden Markov models.

Split on stop codons (nucleotide only): Yes No

Sequences:

Multiple sequence FASTA file:

Notification:
Email address: <--- Please check
Use an example sequence (1plc plastocyanin)
(show further options)

Large numbers of sequences can be accommodated by contacting superfamily@cs.bris.ac.uk.

  • Maximum 1000 sequences
  • Sequences will queue on the server, then run for at least 5 minutes
  • Results will be removed after 15 days
  • Show help